RNA–Protein interactions for RNA: ENST00000613575.4

CDKAL1-204, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKAL1, Length 1,673 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-204ENST00000613575 COL21A1Q96P44 957 aa6.29□□□□□ -1.4
CDKAL1-204ENST00000613575 OR2A14Q96R47 310 aa6.29□□□□□ -1.4
CDKAL1-204ENST00000613575 ZNF300Q96RE9 604 aaPredicted RBP6.29□□□□□ -1.4
CDKAL1-204ENST00000613575 UBL7Q96S82 380 aaPredicted RBP6.29□□□□□ -1.4
CDKAL1-204ENST00000613575 UGT2B28Q9BY64 529 aa6.29□□□□□ -1.4
CDKAL1-204ENST00000613575 TMPRSS5Q9H3S3 457 aa6.29□□□□□ -1.4
CDKAL1-204ENST00000613575 WDR26Q9H7D7 661 aa6.29□□□□□ -1.4
CDKAL1-204ENST00000613575 IMP3Q9NV31 184 aaKnown RBP6.29□□□□□ -1.4
CDKAL1-204ENST00000613575 USE1Q9NZ43 259 aa6.29□□□□□ -1.4
CDKAL1-204ENST00000613575 METTL1Q9UBP6 276 aaKnown RBP6.29□□□□□ -1.4
CDKAL1-204ENST00000613575 GHRLQ9UBU3 117 aa6.29□□□□□ -1.4
CDKAL1-204ENST00000613575 PHF11Q9UIL8 331 aa6.29□□□□□ -1.4
CDKAL1-204ENST00000613575 OAZ3Q9UMX2 235 aa6.29□□□□□ -1.4
CDKAL1-204ENST00000613575 WASF3Q9UPY6 502 aa6.29□□□□□ -1.4
CDKAL1-204ENST00000613575 ERVW-1Q9UQF0 538 aa6.29□□□□□ -1.4
CDKAL1-204ENST00000613575 ZNF451Q9Y4E5 1061 aa6.29□□□□□ -1.4
CDKAL1-204ENST00000613575 MMACHCQ9Y4U1 282 aa6.29□□□□□ -1.4
CDKAL1-204ENST00000613575 PCDHGA6Q9Y5G7 932 aa6.29□□□□□ -1.4
CDKAL1-204ENST00000613575 PCDHGA5Q9Y5G8 931 aa6.29□□□□□ -1.4
CDKAL1-204ENST00000613575 KCNE1BA0A087WTH5 132 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 A0A1W2PN81 502 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 NPIPB15A6NHN6 443 aaPredicted RBP6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 H3BQ06 376 aaPredicted RBP6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 PDCD5O14737 125 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 PROM1O43490 865 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 LCMT2O60294 686 aaKnown RBP6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 HPGDSO60760 199 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 CLDN9O95484 217 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 C8GP07360 202 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 FHP07954 510 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 CTSAP10619 480 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 HOXB9P17482 250 aaPredicted RBP6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 ITGA3P26006 1051 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 GIFP27352 417 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 GABRR2P28476 465 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 HOXA9P31269 272 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 AKT1P31749 480 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 CD70P32970 193 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 CHRNA7P36544 502 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 FEN1P39748 380 aaKnown RBP6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 CEACAM6P40199 344 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 CD96P40200 585 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 GDF5P43026 501 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 RPS9P46781 194 aaKnown RBP6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 SLC6A12P48065 614 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 RGS6P49758 472 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 RRAS2P62070 204 aaPredicted RBP6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 POLR2LP62875 67 aaKnown RBP6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 B4GALNT1Q00973 533 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 MEF2AQ02078 507 aaPredicted RBP6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 ZNF155Q12901 538 aaPredicted RBP6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 RPA4Q13156 261 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 DOC2BQ14184 412 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 CHRFAM7AQ494W8 412 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 GXYLT1Q4G148 440 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 TRIM61Q5EBN2 209 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 CARD16Q5EG05 197 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 PLEKHS1Q5SXH7 462 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 HACD4Q5VWC8 232 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 PRAMEF13Q5VWM6 474 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 KDM4DQ6B0I6 523 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 FRMPD2BQ6IN97 320 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 ETFRF1Q6IPR1 90 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 JMJD6Q6NYC1 403 aaPredicted RBP6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 LRRC70Q7Z2Q7 622 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 DEFB128Q7Z7B8 93 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 IQCHQ86VS3 1027 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 IFNEQ86WN2 208 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 ADHFE1Q8IWW8 467 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 MSRB3Q8IXL7 192 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 BVESQ8NE79 360 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 ZNF296Q8WUU4 475 aaPredicted RBP6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 ASB15Q8WXK1 588 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 ING5Q8WYH8 240 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 THRSPQ92748 146 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 YIPF6Q96EC8 236 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 LRRC46Q96FV0 321 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 AURKBQ96GD4 344 aaPredicted RBP6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 FCRL1Q96LA6 429 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 OR1F2PQ96R84 312 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 COPS8Q99627 209 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 INPP5KQ9BT40 448 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 DPH7Q9BTV6 452 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 DPCDQ9BVM2 203 aaPredicted RBP6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 BEX2Q9BXY8 128 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 SLC46A2Q9BY10 475 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 DGCR6LQ9BY27 220 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 TM6SF2Q9BZW4 377 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 MIR1-1HGQ9H1L0 117 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 DCSTAMPQ9H295 470 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 RIBC2Q9H4K1 309 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 REEP4Q9H6H4 257 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 LRTM1Q9HBL6 345 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 PRDM7Q9NQW5 492 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 ITM2CQ9NQX7 267 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 C1orf109Q9NX04 203 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 SLC25A37Q9NYZ2 338 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 CRLS1Q9UJA2 301 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 TBC1D24Q9ULP9 559 aa6.28□□□□□ -1.4
CDKAL1-204ENST00000613575 PDE10AQ9Y233 779 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms