RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 STPG2Q8N412 459 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 ZNF485Q8NCK3 441 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 ADIPOR1Q96A54 375 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 TSSK2Q96PF2 358 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 TTC24A2A3L6 582 aaPredicted RBP8.31□□□□□ -1.08
TTC28-208ENST00000612946 SCAMP2O15127 329 aaKnown RBP8.31□□□□□ -1.08
TTC28-208ENST00000612946 DPM1O60762 260 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 VAMP3Q15836 100 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 LYSMD3Q7Z3D4 306 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 CDH26Q8IXH8 852 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 OR4E2Q8NGC2 313 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 TMEM163Q8TC26 289 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 HERVK_113Q902F9 699 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 NMNAT2Q9BZQ4 307 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 CASTOR2A6NHX0 329 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 MLIPQ5VWP3 458 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 SLC46A3Q7Z3Q1 461 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 TMEM234Q8WY98 164 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 HOXD1Q9GZZ0 328 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 BUD23O43709 281 aaKnown RBP8.31□□□□□ -1.08
TTC28-208ENST00000612946 TCRBP04435 133 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 CASRP41180 1078 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 NKX1-1Q15270 411 aaPredicted RBP8.31□□□□□ -1.08
TTC28-208ENST00000612946 CELF3Q5SZQ8 465 aaKnown RBP8.31□□□□□ -1.08
TTC28-208ENST00000612946 SIGLECL1Q8N7X8 197 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 SLAIN1Q8ND83 568 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 FUBP3Q96I24 572 aaKnown RBP eCLIP8.31□□□□□ -1.08
TTC28-208ENST00000612946 OSMRQ99650 979 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 ESRP2Q9H6T0 727 aaKnown RBP8.31□□□□□ -1.08
TTC28-208ENST00000612946 ZNF230Q9UIE0 474 aaPredicted RBP8.31□□□□□ -1.08
TTC28-208ENST00000612946 FAM221BA6H8Z2 402 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 ANKRD28O15084 1053 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 ENDOD1O94919 500 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 SNHG28P0DPA3 235 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 DAOAP59103 153 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 MAT1AQ00266 395 aaKnown RBP8.31□□□□□ -1.08
TTC28-208ENST00000612946 ZNF610Q8N9Z0 462 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 ZSCAN4Q8NAM6 433 aaPredicted RBP8.31□□□□□ -1.08
TTC28-208ENST00000612946 MARVELD3Q96A59 401 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 GABARAPL1Q9H0R8 117 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 MYOZ2Q9NPC6 264 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 MRPL22Q9NWU5 206 aaKnown RBP8.31□□□□□ -1.08
TTC28-208ENST00000612946 CACFD1Q9UGQ2 172 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 DDX60Q8IY21 1712 aaKnown RBP8.31□□□□□ -1.08
TTC28-208ENST00000612946 MYOCOSA0A1B0GUC4 107 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 MMP3P08254 477 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 UBL4AP11441 157 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 GM2AP17900 193 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 NDUFV1P49821 464 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 DSC2Q02487 901 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 SNTB1Q13884 538 aaKnown RBP8.31□□□□□ -1.08
TTC28-208ENST00000612946 GPR176Q14439 515 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 OR6M1Q8NGM8 313 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 MAP6Q96JE9 813 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 SFXN2Q96NB2 322 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 STRA6Q9BX79 667 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 GBA2Q9HCG7 927 aaPredicted RBP8.31□□□□□ -1.08
TTC28-208ENST00000612946 PURGQ9UJV8 347 aaKnown RBP8.31□□□□□ -1.08
TTC28-208ENST00000612946 CLEC4EQ9ULY5 219 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 TOGARAM1Q9Y4F4 1720 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 SNRNP200O75643 2136 aaKnown RBP8.31□□□□□ -1.08
TTC28-208ENST00000612946 ZNF850A8MQ14 1090 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 UMAD1C9J7I0 102 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 RNASET2O00584 256 aaKnown RBP8.31□□□□□ -1.08
TTC28-208ENST00000612946 SYN3O14994 580 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 TSPAN12O95859 305 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 HLA-DQB2P05538 268 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 CCKARP32238 428 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 GTF2A2P52657 109 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 CLDN20P56880 219 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 MAXP61244 160 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 PKIAP61925 76 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 OR7D4Q8NG98 312 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 HRASLS5Q96KN8 279 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 TMEM175Q9BSA9 504 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 KATNB1Q9BVA0 655 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 RHBGQ9H310 441 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 CRLF2Q9HC73 371 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 ASAH2Q9NR71 780 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 CEP250Q9BV73 2442 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 TUBGCP6Q96RT7 1819 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 TMEM212A6NML5 194 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 AHSGP02765 367 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 MPEG1Q2M385 716 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 YIF1BQ5BJH7 314 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 FAM171A1Q5VUB5 890 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 SFRP4Q6FHJ7 346 aaPredicted RBP8.31□□□□□ -1.08
TTC28-208ENST00000612946 NHLRC2Q8NBF2 726 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 TBL1XR1Q9BZK7 514 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 SOCS5O75159 536 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 CCR9P51686 369 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 P2RY14Q15391 338 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 ZNF620Q6ZNG0 422 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 NICN1Q9BSH3 213 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 KIAA1217Q5T5P2 1943 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 HAS3O00219 553 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 DRD2P14416 443 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 OR4D2P58180 307 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 MS4A2Q01362 244 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 NPAS4Q8IUM7 802 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms