RNA–Protein interactions for RNA: ENST00000611852.4

CCDC28A-202, Transcript of coiled-coil domain containing 28A, humanhuman

TSL 1 (best) BASIC

Gene CCDC28A, Length 1,505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-202ENST00000611852 COQ5Q5HYK3 327 aa15.07■□□□□ 0
CCDC28A-202ENST00000611852 TYW3Q6IPR3 259 aaKnown RBP15.07■□□□□ 0
CCDC28A-202ENST00000611852 ARHGAP11AQ6P4F7 1023 aa15.07■□□□□ 0
CCDC28A-202ENST00000611852 FRRS1Q6ZNA5 592 aa15.07■□□□□ 0
CCDC28A-202ENST00000611852 TRILQ7L0X0 811 aa15.07■□□□□ 0
CCDC28A-202ENST00000611852 SNX32Q86XE0 403 aa15.07■□□□□ 0
CCDC28A-202ENST00000611852 ANKFN1Q8N957 763 aa15.07■□□□□ 0
CCDC28A-202ENST00000611852 FADS6Q8N9I5 356 aa15.07■□□□□ 0
CCDC28A-202ENST00000611852 GATSQ8NAP1 163 aa15.07■□□□□ 0
CCDC28A-202ENST00000611852 ZNF527Q8NB42 609 aa15.07■□□□□ 0
CCDC28A-202ENST00000611852 OR2M3Q8NG83 312 aa15.07■□□□□ 0
CCDC28A-202ENST00000611852 TRNT1Q96Q11 434 aaKnown RBP15.07■□□□□ 0
CCDC28A-202ENST00000611852 CCDC106Q9BWC9 280 aa15.07■□□□□ 0
CCDC28A-202ENST00000611852 SAP130Q9H0E3 1048 aa15.07■□□□□ 0
CCDC28A-202ENST00000611852 MYLK2Q9H1R3 596 aa15.07■□□□□ 0
CCDC28A-202ENST00000611852 DSN1Q9H410 356 aa15.07■□□□□ 0
CCDC28A-202ENST00000611852 IKZF5Q9H5V7 419 aa15.07■□□□□ 0
CCDC28A-202ENST00000611852 THUMPD1Q9NXG2 353 aaKnown RBP15.07■□□□□ 0
CCDC28A-202ENST00000611852 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.07■□□□□ 0
CCDC28A-202ENST00000611852 WDR45Q9Y484 360 aa15.07■□□□□ 0
CCDC28A-202ENST00000611852 BBIP1A8MTZ0 92 aa15.06■□□□□ 0
CCDC28A-202ENST00000611852 KIAA0513O60268 411 aa15.06■□□□□ 0
CCDC28A-202ENST00000611852 SUSD5O60279 629 aa15.06■□□□□ 0
CCDC28A-202ENST00000611852 HCN1O60741 890 aa15.06■□□□□ 0
CCDC28A-202ENST00000611852 SLC19A2O60779 497 aa15.06■□□□□ 0
CCDC28A-202ENST00000611852 UGT2B17O75795 530 aa15.06■□□□□ 0
CCDC28A-202ENST00000611852 H6PDO95479 791 aa15.06■□□□□ 0
CCDC28A-202ENST00000611852 CHRM4P08173 479 aa15.06■□□□□ 0
CCDC28A-202ENST00000611852 BMP2P12643 396 aa15.06■□□□□ 0
CCDC28A-202ENST00000611852 RBPJQ06330 500 aa15.06■□□□□ 0
CCDC28A-202ENST00000611852 NFYCQ13952 458 aa15.06■□□□□ 0
CCDC28A-202ENST00000611852 TOMM20Q15388 145 aa15.06■□□□□ 0
CCDC28A-202ENST00000611852 CD226Q15762 336 aa15.06■□□□□ 0
CCDC28A-202ENST00000611852 ZNF141Q15928 474 aa15.06■□□□□ 0
CCDC28A-202ENST00000611852 RUNDC3AQ59EK9 446 aa15.06■□□□□ 0
CCDC28A-202ENST00000611852 SPPL2CQ8IUH8 684 aa15.06■□□□□ 0
CCDC28A-202ENST00000611852 FAM83FQ8NEG4 500 aaPredicted RBP15.06■□□□□ 0
CCDC28A-202ENST00000611852 OR4K17Q8NGC6 315 aa15.06■□□□□ 0
CCDC28A-202ENST00000611852 PRR7Q8TB68 274 aa15.06■□□□□ 0
CCDC28A-202ENST00000611852 CCT8L2Q96SF2 557 aa15.06■□□□□ 0
CCDC28A-202ENST00000611852 CGREF1Q99674 301 aa15.06■□□□□ 0
CCDC28A-202ENST00000611852 CPPED1Q9BRF8 314 aaPredicted RBP15.06■□□□□ 0
CCDC28A-202ENST00000611852 SLC38A1Q9H2H9 487 aa15.06■□□□□ 0
CCDC28A-202ENST00000611852 SLC6A15Q9H2J7 730 aa15.06■□□□□ 0
CCDC28A-202ENST00000611852 LDAHQ9H6V9 325 aa15.06■□□□□ 0
CCDC28A-202ENST00000611852 RUBCNLQ9H714 662 aa15.06■□□□□ 0
CCDC28A-202ENST00000611852 MED11Q9P086 117 aa15.06■□□□□ 0
CCDC28A-202ENST00000611852 P2RX2Q9UBL9 471 aa15.06■□□□□ 0
CCDC28A-202ENST00000611852 OSGIN2Q9Y236 505 aa15.06■□□□□ 0
CCDC28A-202ENST00000611852 ZNF835Q9Y2P0 537 aa15.06■□□□□ 0
CCDC28A-202ENST00000611852 DTNAQ9Y4J8 743 aa15.06■□□□□ 0
CCDC28A-202ENST00000611852 HIVEP3Q5T1R4 2406 aa15.05■□□□□ 0
CCDC28A-202ENST00000611852 PCNX3Q9H6A9 2034 aa15.05■□□□□ -0
CCDC28A-202ENST00000611852 TRGV5A0A0B4J1U4 118 aa15.05■□□□□ -0
CCDC28A-202ENST00000611852 CENPVL1A0A0U1RR11 272 aa15.05■□□□□ -0
CCDC28A-202ENST00000611852 TNFRSF21O75509 655 aa15.05■□□□□ -0
CCDC28A-202ENST00000611852 TFPTP0C1Z6 253 aa15.05■□□□□ -0
CCDC28A-202ENST00000611852 NR2F1P10589 423 aa15.05■□□□□ -0
CCDC28A-202ENST00000611852 GPX2P18283 190 aa15.05■□□□□ -0
CCDC28A-202ENST00000611852 ENDOUP21128 410 aaKnown RBP15.05■□□□□ -0
CCDC28A-202ENST00000611852 HPCAP84074 193 aa15.05■□□□□ -0
CCDC28A-202ENST00000611852 CHRNEQ04844 493 aa15.05■□□□□ -0
CCDC28A-202ENST00000611852 CYLC2Q14093 348 aaPredicted RBP15.05■□□□□ -0
CCDC28A-202ENST00000611852 MMEL1Q495T6 779 aa15.05■□□□□ -0
CCDC28A-202ENST00000611852 EIPR1Q53HC9 387 aa15.05■□□□□ -0
CCDC28A-202ENST00000611852 PDZK1Q5T2W1 519 aa15.05■□□□□ -0
CCDC28A-202ENST00000611852 REP15Q6BDI9 236 aa15.05■□□□□ -0
CCDC28A-202ENST00000611852 LRRC74BQ6ZQY2 392 aa15.05■□□□□ -0
CCDC28A-202ENST00000611852 MISPQ8IVT2 679 aa15.05■□□□□ -0
CCDC28A-202ENST00000611852 ZNF619Q8N2I2 560 aa15.05■□□□□ -0
CCDC28A-202ENST00000611852 C10orf111Q8N326 155 aa15.05■□□□□ -0
CCDC28A-202ENST00000611852 RP9Q8TA86 221 aaKnown RBP15.05■□□□□ -0
CCDC28A-202ENST00000611852 NEIL3Q8TAT5 605 aa15.05■□□□□ -0
CCDC28A-202ENST00000611852 SLC38A5Q8WUX1 472 aa15.05■□□□□ -0
CCDC28A-202ENST00000611852 ZG16BQ96DA0 208 aa15.05■□□□□ -0
CCDC28A-202ENST00000611852 ANKRD27Q96NW4 1050 aa15.05■□□□□ -0
CCDC28A-202ENST00000611852 ARL2BPQ9Y2Y0 163 aa15.05■□□□□ -0
CCDC28A-202ENST00000611852 GCN1Q92616 2671 aaKnown RBP15.05■□□□□ -0
CCDC28A-202ENST00000611852 EVPLLA8MZ36 301 aa15.04■□□□□ -0
CCDC28A-202ENST00000611852 AQP7O14520 342 aa15.04■□□□□ -0
CCDC28A-202ENST00000611852 MRASO14807 208 aa15.04■□□□□ -0
CCDC28A-202ENST00000611852 STSP08842 583 aa15.04■□□□□ -0
CCDC28A-202ENST00000611852 NUDT7P0C024 238 aa15.04■□□□□ -0
CCDC28A-202ENST00000611852 ABOP16442 354 aa15.04■□□□□ -0
CCDC28A-202ENST00000611852 SRD5A2P31213 254 aa15.04■□□□□ -0
CCDC28A-202ENST00000611852 PTGS2P35354 604 aa15.04■□□□□ -0
CCDC28A-202ENST00000611852 RNF144AP50876 292 aaPredicted RBP15.04■□□□□ -0
CCDC28A-202ENST00000611852 MAPK14Q16539 360 aa15.04■□□□□ -0
CCDC28A-202ENST00000611852 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.04■□□□□ -0
CCDC28A-202ENST00000611852 TRMT5Q32P41 509 aaKnown RBP15.04■□□□□ -0
CCDC28A-202ENST00000611852 WIPI1Q5MNZ9 446 aaPredicted RBP15.04■□□□□ -0
CCDC28A-202ENST00000611852 Q6ZPB1 254 aaPredicted RBP15.04■□□□□ -0
CCDC28A-202ENST00000611852 ZNF771Q7L3S4 317 aaPredicted RBP15.04■□□□□ -0
CCDC28A-202ENST00000611852 YRDCQ86U90 279 aaKnown RBP15.04■□□□□ -0
CCDC28A-202ENST00000611852 TREML1Q86YW5 311 aa15.04■□□□□ -0
CCDC28A-202ENST00000611852 POU5F2Q8N7G0 328 aa15.04■□□□□ -0
CCDC28A-202ENST00000611852 ZNF614Q8N883 585 aa15.04■□□□□ -0
CCDC28A-202ENST00000611852 PHOSPHO1Q8TCT1 267 aa15.04■□□□□ -0
CCDC28A-202ENST00000611852 OIT3Q8WWZ8 545 aa15.04■□□□□ -0
CCDC28A-202ENST00000611852 DTNBP1Q96EV8 351 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms