RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 CCDC116Q8IYX3 515 aa8.15□□□□□ -1.1
SMAD4-217ENST00000611848 HS3ST5Q8IZT8 346 aa8.15□□□□□ -1.1
SMAD4-217ENST00000611848 BEST3Q8N1M1 668 aa8.15□□□□□ -1.1
SMAD4-217ENST00000611848 VWA5B2Q8N398 1253 aa8.15□□□□□ -1.1
SMAD4-217ENST00000611848 ZNF321PQ8N8H1 164 aa8.15□□□□□ -1.1
SMAD4-217ENST00000611848 OR52N2Q8NGI0 321 aa8.15□□□□□ -1.1
SMAD4-217ENST00000611848 OR10Q1Q8NGQ4 319 aa8.15□□□□□ -1.1
SMAD4-217ENST00000611848 OR2T29Q8NH02 315 aa8.15□□□□□ -1.1
SMAD4-217ENST00000611848 TMIGD2Q96BF3 282 aa8.15□□□□□ -1.1
SMAD4-217ENST00000611848 CTHRC1Q96CG8 243 aa8.15□□□□□ -1.1
SMAD4-217ENST00000611848 C7orf34Q96L11 122 aa8.15□□□□□ -1.1
SMAD4-217ENST00000611848 UTP23Q9BRU9 249 aaKnown RBP8.15□□□□□ -1.1
SMAD4-217ENST00000611848 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.15□□□□□ -1.1
SMAD4-217ENST00000611848 VNN3Q9NY84 501 aa8.15□□□□□ -1.1
SMAD4-217ENST00000611848 PLA2G3Q9NZ20 509 aa8.15□□□□□ -1.1
SMAD4-217ENST00000611848 MAT2BQ9NZL9 334 aa8.15□□□□□ -1.1
SMAD4-217ENST00000611848 MYOTQ9UBF9 498 aa8.15□□□□□ -1.1
SMAD4-217ENST00000611848 ABCG2Q9UNQ0 655 aa8.15□□□□□ -1.1
SMAD4-217ENST00000611848 YARS2Q9Y2Z4 477 aaKnown RBP8.15□□□□□ -1.1
SMAD4-217ENST00000611848 ZNF462Q96JM2 2506 aa8.15□□□□□ -1.11
SMAD4-217ENST00000611848 TMEM200CA6NKL6 621 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 ZNF701M0R085 212 aaPredicted RBP8.14□□□□□ -1.11
SMAD4-217ENST00000611848 HRKO00198 91 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 SUV39H1O43463 412 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 PRKNO60260 465 aaPredicted RBP8.14□□□□□ -1.11
SMAD4-217ENST00000611848 E2F6O75461 281 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 ITGA10O75578 1167 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 C6orf47O95873 294 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 CT62P0C5K7 136 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 S1PR1P21453 382 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 PRKACGP22612 351 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 DNAJA1P31689 397 aaKnown RBP8.14□□□□□ -1.11
SMAD4-217ENST00000611848 TRHRP34981 398 aaPredicted RBP8.14□□□□□ -1.11
SMAD4-217ENST00000611848 PIGAP37287 484 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 CD97P48960 835 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 CYB561P49447 251 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 TNFSF10P50591 281 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 SSR4P51571 173 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 RPS6KA3P51812 740 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 NCBP2P52298 156 aaKnown RBP eCLIP8.14□□□□□ -1.11
SMAD4-217ENST00000611848 RAD23AP54725 363 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 KCNJ10P78508 379 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 VLDLRP98155 873 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 DUSP2Q05923 314 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 MGAT2Q10469 447 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 FADDQ13158 208 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 TUBA3CQ13748 450 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 ZNF169Q14929 603 aaPredicted RBP8.14□□□□□ -1.11
SMAD4-217ENST00000611848 PLEKHN1Q494U1 663 aaPredicted RBP8.14□□□□□ -1.11
SMAD4-217ENST00000611848 ZNF628Q5EBL2 1059 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.14□□□□□ -1.11
SMAD4-217ENST00000611848 ANKRD34AQ69YU3 496 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 FAM180BQ6P0A1 224 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 TUBA3EQ6PEY2 450 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 CCDC80Q76M96 950 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 VTCN1Q7Z7D3 282 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 C9orf40Q8IXQ3 194 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 C8orf59Q8N0T1 100 aaPredicted RBP8.14□□□□□ -1.11
SMAD4-217ENST00000611848 TMEM156Q8N614 296 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 NATD1Q8N6N6 113 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 HORMAD2Q8N7B1 307 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 C11orf65Q8NCR3 313 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 ZNF555Q8NEP9 628 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 SUN3Q8TAQ9 357 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 DOK4Q8TEW6 326 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 THAP3Q8WTV1 239 aaPredicted RBP8.14□□□□□ -1.11
SMAD4-217ENST00000611848 FBLIM1Q8WUP2 373 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 HDAC2Q92769 488 aaKnown RBP8.14□□□□□ -1.11
SMAD4-217ENST00000611848 CIDECQ96AQ7 238 aaPredicted RBP8.14□□□□□ -1.11
SMAD4-217ENST00000611848 HSH2DQ96JZ2 352 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 OR10A5Q9H207 317 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 GLIPR2Q9H4G4 154 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 TMEM38AQ9H6F2 299 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 TRIM45Q9H8W5 580 aaPredicted RBP8.14□□□□□ -1.11
SMAD4-217ENST00000611848 SLAMF7Q9NQ25 335 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 TAS2R9Q9NYW1 312 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 RSL24D1Q9UHA3 163 aaKnown RBP8.14□□□□□ -1.11
SMAD4-217ENST00000611848 FAF1Q9UNN5 650 aaPredicted RBP8.14□□□□□ -1.11
SMAD4-217ENST00000611848 LOC100130705A0A1B0GUX0 176 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 C2orf92A0A1B0GVN3 265 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 A0A1W2PRB8 838 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 PDPK1O15530 556 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 HS6ST1O60243 411 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 MAN1A2O60476 641 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 PLOD3O60568 738 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 CLPSP04118 112 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 IFI6P09912 130 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 JUNBP17275 347 aaPredicted RBP8.14□□□□□ -1.11
SMAD4-217ENST00000611848 FPR1P21462 350 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 ELK4P28324 431 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 SSTR4P31391 388 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 TTKP33981 857 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 RYKP34925 604 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 CD96P40200 585 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 ISL1P61371 349 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 ESRRGP62508 458 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 OC90Q02509 493 aaPredicted RBP8.14□□□□□ -1.11
SMAD4-217ENST00000611848 PPP1R8Q12972 351 aaKnown RBP8.14□□□□□ -1.11
SMAD4-217ENST00000611848 EBPQ15125 230 aaKnown RBP8.14□□□□□ -1.11
SMAD4-217ENST00000611848 TRMT12Q53H54 448 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms