RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.4□□□□□ -0.26
PCDHB16-201ENST00000609684 OR52D1Q9H346 318 aa13.4□□□□□ -0.26
PCDHB16-201ENST00000609684 DDX31Q9H8H2 851 aaKnown RBP13.4□□□□□ -0.26
PCDHB16-201ENST00000609684 HPF1Q9NWY4 346 aa13.4□□□□□ -0.26
PCDHB16-201ENST00000609684 PCDHGA3Q9Y5H0 932 aa13.4□□□□□ -0.26
PCDHB16-201ENST00000609684 CPMP14384 443 aa13.4□□□□□ -0.26
PCDHB16-201ENST00000609684 GRK5P34947 590 aa13.4□□□□□ -0.26
PCDHB16-201ENST00000609684 ENTPD8Q5MY95 495 aa13.4□□□□□ -0.26
PCDHB16-201ENST00000609684 SYNPOQ8N3V7 929 aa13.4□□□□□ -0.26
PCDHB16-201ENST00000609684 TRMT10AQ8TBZ6 339 aaKnown RBP13.4□□□□□ -0.26
PCDHB16-201ENST00000609684 TMEM246Q9BRR3 403 aa13.4□□□□□ -0.26
PCDHB16-201ENST00000609684 FAIMQ9NVQ4 179 aa13.4□□□□□ -0.26
PCDHB16-201ENST00000609684 CNOT2Q9NZN8 540 aaKnown RBP13.4□□□□□ -0.26
PCDHB16-201ENST00000609684 SEC14L5O43304 696 aa13.4□□□□□ -0.26
PCDHB16-201ENST00000609684 IGLV3-25P01717 112 aa13.4□□□□□ -0.26
PCDHB16-201ENST00000609684 IL7P13232 177 aa13.4□□□□□ -0.26
PCDHB16-201ENST00000609684 ATF4P18848 351 aaPredicted RBP13.4□□□□□ -0.26
PCDHB16-201ENST00000609684 PVALBP20472 110 aaPredicted RBP13.4□□□□□ -0.26
PCDHB16-201ENST00000609684 RGS6P49758 472 aa13.4□□□□□ -0.26
PCDHB16-201ENST00000609684 PER3P56645 1201 aa13.4□□□□□ -0.26
PCDHB16-201ENST00000609684 LRRC26Q2I0M4 334 aa13.4□□□□□ -0.26
PCDHB16-201ENST00000609684 SFRP4Q6FHJ7 346 aaPredicted RBP13.4□□□□□ -0.26
PCDHB16-201ENST00000609684 OR5W2Q8NH69 310 aa13.4□□□□□ -0.26
PCDHB16-201ENST00000609684 URM1Q9BTM9 101 aaKnown RBP13.4□□□□□ -0.26
PCDHB16-201ENST00000609684 ACTR6Q9GZN1 396 aa13.4□□□□□ -0.26
PCDHB16-201ENST00000609684 NAA50Q9GZZ1 169 aaKnown RBP13.4□□□□□ -0.26
PCDHB16-201ENST00000609684 TEX10Q9NXF1 929 aaPredicted RBP13.4□□□□□ -0.26
PCDHB16-201ENST00000609684 ERCC1P07992 297 aaPredicted RBP13.39□□□□□ -0.27
PCDHB16-201ENST00000609684 PNMTP11086 282 aa13.39□□□□□ -0.27
PCDHB16-201ENST00000609684 ZNF26P17031 533 aaPredicted RBP13.39□□□□□ -0.27
PCDHB16-201ENST00000609684 LHCGRP22888 699 aa13.39□□□□□ -0.27
PCDHB16-201ENST00000609684 CFL1P23528 166 aaKnown RBP13.39□□□□□ -0.27
PCDHB16-201ENST00000609684 RBMXP38159 391 aaKnown RBP13.39□□□□□ -0.27
PCDHB16-201ENST00000609684 CDNFQ49AH0 187 aa13.39□□□□□ -0.27
PCDHB16-201ENST00000609684 CCSMST1Q4G0I0 132 aa13.39□□□□□ -0.27
PCDHB16-201ENST00000609684 GGHQ92820 318 aa13.39□□□□□ -0.27
PCDHB16-201ENST00000609684 TRIM43Q96BQ3 446 aaPredicted RBP13.39□□□□□ -0.27
PCDHB16-201ENST00000609684 ADAM29Q9UKF5 820 aa13.39□□□□□ -0.27
PCDHB16-201ENST00000609684 FAM183AA6NL82 134 aa13.39□□□□□ -0.27
PCDHB16-201ENST00000609684 VNN2O95498 520 aa13.39□□□□□ -0.27
PCDHB16-201ENST00000609684 ITGBL1O95965 494 aaPredicted RBP13.39□□□□□ -0.27
PCDHB16-201ENST00000609684 PLATP00750 562 aa13.39□□□□□ -0.27
PCDHB16-201ENST00000609684 CDK4P11802 303 aa13.39□□□□□ -0.27
PCDHB16-201ENST00000609684 TBCEQ15813 527 aaPredicted RBP13.39□□□□□ -0.27
PCDHB16-201ENST00000609684 IL22RA1Q8N6P7 574 aa13.39□□□□□ -0.27
PCDHB16-201ENST00000609684 ZNF350Q9GZX5 532 aa13.39□□□□□ -0.27
PCDHB16-201ENST00000609684 MAB21L2Q9Y586 359 aa13.39□□□□□ -0.27
PCDHB16-201ENST00000609684 GPR75O95800 540 aa13.39□□□□□ -0.27
PCDHB16-201ENST00000609684 FURINP09958 794 aa13.39□□□□□ -0.27
PCDHB16-201ENST00000609684 CHRFAM7AQ494W8 412 aa13.39□□□□□ -0.27
PCDHB16-201ENST00000609684 CNIH2Q6PI25 160 aa13.39□□□□□ -0.27
PCDHB16-201ENST00000609684 SLC38A5Q8WUX1 472 aa13.39□□□□□ -0.27
PCDHB16-201ENST00000609684 ZNF471Q9BX82 626 aaPredicted RBP13.39□□□□□ -0.27
PCDHB16-201ENST00000609684 P2RY12Q9H244 342 aa13.39□□□□□ -0.27
PCDHB16-201ENST00000609684 CPNE5Q9HCH3 593 aa13.39□□□□□ -0.27
PCDHB16-201ENST00000609684 C2orf42Q9NWW7 574 aa13.39□□□□□ -0.27
PCDHB16-201ENST00000609684 ZNF443Q9Y2A4 671 aaPredicted RBP13.39□□□□□ -0.27
PCDHB16-201ENST00000609684 USP54Q70EL1 1684 aa13.39□□□□□ -0.27
PCDHB16-201ENST00000609684 FUOMA2VDF0 154 aa13.39□□□□□ -0.27
PCDHB16-201ENST00000609684 CHRNEQ04844 493 aa13.39□□□□□ -0.27
PCDHB16-201ENST00000609684 CCINQ13939 588 aa13.39□□□□□ -0.27
PCDHB16-201ENST00000609684 RAB11BQ15907 218 aa13.39□□□□□ -0.27
PCDHB16-201ENST00000609684 SHISA6Q6ZSJ9 500 aa13.39□□□□□ -0.27
PCDHB16-201ENST00000609684 DRAXINQ8NBI3 349 aaPredicted RBP13.39□□□□□ -0.27
PCDHB16-201ENST00000609684 OR9A4Q8NGU2 314 aa13.39□□□□□ -0.27
PCDHB16-201ENST00000609684 C1QTNF2Q9BXJ5 285 aa13.39□□□□□ -0.27
PCDHB16-201ENST00000609684 MGAT4CQ9UBM8 478 aa13.39□□□□□ -0.27
PCDHB16-201ENST00000609684 NUFIP1Q9UHK0 495 aaKnown RBP13.39□□□□□ -0.27
PCDHB16-201ENST00000609684 TRAV27A0A087WT01 109 aa13.38□□□□□ -0.27
PCDHB16-201ENST00000609684 TRBV4-1A0A0J9YWV2 114 aa13.38□□□□□ -0.27
PCDHB16-201ENST00000609684 UPK1BO75841 260 aa13.38□□□□□ -0.27
PCDHB16-201ENST00000609684 KCNK5O95279 499 aa13.38□□□□□ -0.27
PCDHB16-201ENST00000609684 GYPBP06028 91 aa13.38□□□□□ -0.27
PCDHB16-201ENST00000609684 CHMP24386 653 aa13.38□□□□□ -0.27
PCDHB16-201ENST00000609684 SLC5A2P31639 672 aa13.38□□□□□ -0.27
PCDHB16-201ENST00000609684 DAPP51397 102 aa13.38□□□□□ -0.27
PCDHB16-201ENST00000609684 ACY1Q03154 408 aa13.38□□□□□ -0.27
PCDHB16-201ENST00000609684 HHIPL1Q96JK4 782 aa13.38□□□□□ -0.27
PCDHB16-201ENST00000609684 TREM1Q9NP99 234 aa13.38□□□□□ -0.27
PCDHB16-201ENST00000609684 CD300AQ9UGN4 299 aa13.38□□□□□ -0.27
PCDHB16-201ENST00000609684 TEX13CA0A0J9YWL9 993 aa13.38□□□□□ -0.27
PCDHB16-201ENST00000609684 H3BML4 177 aa13.38□□□□□ -0.27
PCDHB16-201ENST00000609684 SLCO2B1O94956 709 aa13.38□□□□□ -0.27
PCDHB16-201ENST00000609684 UBL4AP11441 157 aa13.38□□□□□ -0.27
PCDHB16-201ENST00000609684 UGT2B10P36537 528 aa13.38□□□□□ -0.27
PCDHB16-201ENST00000609684 GIPRP48546 466 aa13.38□□□□□ -0.27
PCDHB16-201ENST00000609684 TLE3Q04726 772 aa13.38□□□□□ -0.27
PCDHB16-201ENST00000609684 TMEM31Q5JXX7 168 aa13.38□□□□□ -0.27
PCDHB16-201ENST00000609684 TMEM184AQ6ZMB5 413 aa13.38□□□□□ -0.27
PCDHB16-201ENST00000609684 ALDH16A1Q8IZ83 802 aa13.38□□□□□ -0.27
PCDHB16-201ENST00000609684 OR5J2Q8NH18 312 aa13.38□□□□□ -0.27
PCDHB16-201ENST00000609684 SPPL3Q8TCT6 385 aa13.38□□□□□ -0.27
PCDHB16-201ENST00000609684 ADAMTS19Q8TE59 1207 aa13.38□□□□□ -0.27
PCDHB16-201ENST00000609684 NAA11Q9BSU3 229 aaPredicted RBP13.38□□□□□ -0.27
PCDHB16-201ENST00000609684 TAAR2Q9P1P5 351 aa13.38□□□□□ -0.27
PCDHB16-201ENST00000609684 CARD8Q9Y2G2 431 aa13.38□□□□□ -0.27
PCDHB16-201ENST00000609684 H0YGG7 62 aa13.38□□□□□ -0.27
PCDHB16-201ENST00000609684 NKX2-5P52952 324 aaPredicted RBP13.38□□□□□ -0.27
PCDHB16-201ENST00000609684 PFN3P60673 137 aa13.38□□□□□ -0.27
PCDHB16-201ENST00000609684 ARF3P61204 181 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms