RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 GPR171O14626 319 aa20.87■□□□□ 0.93
SHANK2-220ENST00000608988 OR1F1O43749 312 aa20.87■□□□□ 0.93
SHANK2-220ENST00000608988 HYAL3O43820 417 aaPredicted RBP20.87■□□□□ 0.93
SHANK2-220ENST00000608988 PRAF2O60831 178 aa20.87■□□□□ 0.93
SHANK2-220ENST00000608988 DNASE1P24855 282 aa20.87■□□□□ 0.93
SHANK2-220ENST00000608988 PRKAG1P54619 331 aa20.87■□□□□ 0.93
SHANK2-220ENST00000608988 RGS8P57771 180 aaPredicted RBP20.87■□□□□ 0.93
SHANK2-220ENST00000608988 AANATQ16613 207 aa20.87■□□□□ 0.93
SHANK2-220ENST00000608988 GDF7Q7Z4P5 450 aa20.87■□□□□ 0.93
SHANK2-220ENST00000608988 SLC44A3Q8N4M1 653 aa20.87■□□□□ 0.93
SHANK2-220ENST00000608988 SLC41A3Q96GZ6 507 aa20.87■□□□□ 0.93
SHANK2-220ENST00000608988 C1QTNF7Q9BXJ2 289 aa20.87■□□□□ 0.93
SHANK2-220ENST00000608988 UBQLN3Q9H347 655 aa20.87■□□□□ 0.93
SHANK2-220ENST00000608988 LRRN3Q9H3W5 708 aa20.87■□□□□ 0.93
SHANK2-220ENST00000608988 SIRT4Q9Y6E7 314 aaPredicted RBP20.87■□□□□ 0.93
SHANK2-220ENST00000608988 CSNK1G3Q9Y6M4 447 aa20.87■□□□□ 0.93
SHANK2-220ENST00000608988 CKAP5Q14008 2032 aa20.86■□□□□ 0.93
SHANK2-220ENST00000608988 TRAV1-2A0A0B4J238 106 aa20.86■□□□□ 0.93
SHANK2-220ENST00000608988 SLC9B1P1A6NJY1 282 aa20.86■□□□□ 0.93
SHANK2-220ENST00000608988 SC5DO75845 299 aa20.86■□□□□ 0.93
SHANK2-220ENST00000608988 PRNPP04156 253 aa20.86■□□□□ 0.93
SHANK2-220ENST00000608988 RRASP10301 218 aa20.86■□□□□ 0.93
SHANK2-220ENST00000608988 GCGRP47871 477 aa20.86■□□□□ 0.93
SHANK2-220ENST00000608988 CLCNKAP51800 687 aa20.86■□□□□ 0.93
SHANK2-220ENST00000608988 EXOSC2Q13868 293 aaKnown RBP20.86■□□□□ 0.93
SHANK2-220ENST00000608988 SLC9A5Q14940 896 aa20.86■□□□□ 0.93
SHANK2-220ENST00000608988 LGALSLQ3ZCW2 172 aaPredicted RBP20.86■□□□□ 0.93
SHANK2-220ENST00000608988 RPL13AP3Q6NVV1 102 aa20.86■□□□□ 0.93
SHANK2-220ENST00000608988 WASH2PQ6VEQ5 465 aa20.86■□□□□ 0.93
SHANK2-220ENST00000608988 OLIG3Q7RTU3 272 aa20.86■□□□□ 0.93
SHANK2-220ENST00000608988 NRMQ8IXM6 262 aa20.86■□□□□ 0.93
SHANK2-220ENST00000608988 C2orf73Q8N5S3 287 aaPredicted RBP20.86■□□□□ 0.93
SHANK2-220ENST00000608988 MS4A15Q8N5U1 240 aa20.86■□□□□ 0.93
SHANK2-220ENST00000608988 ABHD4Q8TB40 342 aa20.86■□□□□ 0.93
SHANK2-220ENST00000608988 GANCQ8TET4 914 aa20.86■□□□□ 0.93
SHANK2-220ENST00000608988 MCHR1Q99705 422 aa20.86■□□□□ 0.93
SHANK2-220ENST00000608988 TIMP4Q99727 224 aa20.86■□□□□ 0.93
SHANK2-220ENST00000608988 DLL4Q9NR61 685 aa20.86■□□□□ 0.93
SHANK2-220ENST00000608988 RNF186Q9NXI6 227 aa20.86■□□□□ 0.93
SHANK2-220ENST00000608988 MAB21L2Q9Y586 359 aa20.86■□□□□ 0.93
SHANK2-220ENST00000608988 FEZF1A0PJY2 475 aa20.86■□□□□ 0.93
SHANK2-220ENST00000608988 H7BY64 318 aa20.86■□□□□ 0.93
SHANK2-220ENST00000608988 SPINT1O43278 529 aa20.86■□□□□ 0.93
SHANK2-220ENST00000608988 LAG3P18627 525 aa20.86■□□□□ 0.93
SHANK2-220ENST00000608988 TRHRP34981 398 aaPredicted RBP20.86■□□□□ 0.93
SHANK2-220ENST00000608988 GPR4P46093 362 aa20.86■□□□□ 0.93
SHANK2-220ENST00000608988 LHX8Q68G74 356 aa20.86■□□□□ 0.93
SHANK2-220ENST00000608988 RTL4Q6ZR62 310 aa20.86■□□□□ 0.93
SHANK2-220ENST00000608988 AMZ2Q86W34 360 aa20.86■□□□□ 0.93
SHANK2-220ENST00000608988 NKAIN4Q8IVV8 208 aa20.86■□□□□ 0.93
SHANK2-220ENST00000608988 SIAH3Q8IW03 269 aa20.86■□□□□ 0.93
SHANK2-220ENST00000608988 RAB42Q8N4Z0 105 aa20.86■□□□□ 0.93
SHANK2-220ENST00000608988 OR52L1Q8NGH7 329 aa20.86■□□□□ 0.93
SHANK2-220ENST00000608988 AUTS2Q8WXX7 1259 aa20.86■□□□□ 0.93
SHANK2-220ENST00000608988 SAMD8Q96LT4 415 aa20.86■□□□□ 0.93
SHANK2-220ENST00000608988 PRAP1Q96NZ9 151 aa20.86■□□□□ 0.93
SHANK2-220ENST00000608988 YIPF4Q9BSR8 244 aa20.86■□□□□ 0.93
SHANK2-220ENST00000608988 CACYBPQ9HB71 228 aaKnown RBP20.86■□□□□ 0.93
SHANK2-220ENST00000608988 KIF25Q9UIL4 384 aa20.86■□□□□ 0.93
SHANK2-220ENST00000608988 CAMK2AQ9UQM7 478 aa20.86■□□□□ 0.93
SHANK2-220ENST00000608988 CCL26Q9Y258 94 aa20.86■□□□□ 0.93
SHANK2-220ENST00000608988 GPR55Q9Y2T6 319 aaPredicted RBP20.86■□□□□ 0.93
SHANK2-220ENST00000608988 TET1Q8NFU7 2136 aa20.85■□□□□ 0.93
SHANK2-220ENST00000608988 LRIT2A6NDA9 550 aa20.85■□□□□ 0.93
SHANK2-220ENST00000608988 UNC119BA6NIH7 251 aa20.85■□□□□ 0.93
SHANK2-220ENST00000608988 SLC22A31A6NKX4 558 aa20.85■□□□□ 0.93
SHANK2-220ENST00000608988 LILRB3O75022 631 aa20.85■□□□□ 0.93
SHANK2-220ENST00000608988 STX11O75558 287 aa20.85■□□□□ 0.93
SHANK2-220ENST00000608988 FGF19O95750 216 aa20.85■□□□□ 0.93
SHANK2-220ENST00000608988 SERPINA3P01011 423 aa20.85■□□□□ 0.93
SHANK2-220ENST00000608988 GJA1P17302 382 aa20.85■□□□□ 0.93
SHANK2-220ENST00000608988 CSNK2A2P19784 350 aaPredicted RBP20.85■□□□□ 0.93
SHANK2-220ENST00000608988 CSNK1G2P78368 415 aa20.85■□□□□ 0.93
SHANK2-220ENST00000608988 B3GLCTQ6Y288 498 aa20.85■□□□□ 0.93
SHANK2-220ENST00000608988 CEACAM19Q7Z692 300 aa20.85■□□□□ 0.93
SHANK2-220ENST00000608988 VRK2Q86Y07 508 aa20.85■□□□□ 0.93
SHANK2-220ENST00000608988 SLITRK4Q8IW52 837 aa20.85■□□□□ 0.93
SHANK2-220ENST00000608988 RPLP0P6Q8NHW5 317 aa20.85■□□□□ 0.93
SHANK2-220ENST00000608988 SLC2A12Q8TD20 617 aa20.85■□□□□ 0.93
SHANK2-220ENST00000608988 ERMAPQ96PL5 475 aaPredicted RBP20.85■□□□□ 0.93
SHANK2-220ENST00000608988 DPCDQ9BVM2 203 aaPredicted RBP20.85■□□□□ 0.93
SHANK2-220ENST00000608988 ZCCHC4Q9H5U6 513 aa20.85■□□□□ 0.93
SHANK2-220ENST00000608988 DNAH12Q6ZR08 3092 aa20.84■□□□□ 0.93
SHANK2-220ENST00000608988 A0A1W2PPV9 198 aa20.84■□□□□ 0.93
SHANK2-220ENST00000608988 K7ESM1 405 aa20.84■□□□□ 0.93
SHANK2-220ENST00000608988 PGRMC2O15173 223 aa20.84■□□□□ 0.93
SHANK2-220ENST00000608988 AGR2O95994 175 aa20.84■□□□□ 0.93
SHANK2-220ENST00000608988 CXCL3P19876 107 aa20.84■□□□□ 0.93
SHANK2-220ENST00000608988 GIFP27352 417 aa20.84■□□□□ 0.93
SHANK2-220ENST00000608988 ZNF81P51508 661 aa20.84■□□□□ 0.93
SHANK2-220ENST00000608988 FGFBP1Q14512 234 aa20.84■□□□□ 0.93
SHANK2-220ENST00000608988 ZIC1Q15915 447 aa20.84■□□□□ 0.93
SHANK2-220ENST00000608988 UAP1L1Q3KQV9 507 aa20.84■□□□□ 0.93
SHANK2-220ENST00000608988 C6orf132Q5T0Z8 1188 aa20.84■□□□□ 0.93
SHANK2-220ENST00000608988 FAM69AQ5T7M9 428 aa20.84■□□□□ 0.93
SHANK2-220ENST00000608988 MRM1Q6IN84 353 aaKnown RBP20.84■□□□□ 0.93
SHANK2-220ENST00000608988 IL20RBQ6UXL0 311 aa20.84■□□□□ 0.93
SHANK2-220ENST00000608988 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.84■□□□□ 0.93
SHANK2-220ENST00000608988 TMEM99Q8N816 258 aa20.84■□□□□ 0.93
SHANK2-220ENST00000608988 AMER3Q8N944 861 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms