RNA–Protein interactions for RNA: ENST00000608568.1

SSX9-202, Transcript of Protein SSX9, humanhuman

TSL 4 BASIC

Gene SSX9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-202ENST00000608568 AGRPO00253 132 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 GPR171O14626 319 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 CASKO14936 926 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 NUPL2O15504 423 aaKnown RBP4.76□□□□□ -1.65
SSX9-202ENST00000608568 SMAD6O43541 496 aaKnown RBP4.76□□□□□ -1.65
SSX9-202ENST00000608568 HYAL3O43820 417 aaPredicted RBP4.76□□□□□ -1.65
SSX9-202ENST00000608568 KLK8O60259 260 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 LCMT2O60294 686 aaKnown RBP4.76□□□□□ -1.65
SSX9-202ENST00000608568 TSPAN3O60637 253 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 TPST2O60704 377 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 KERAO60938 352 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 GJB3O75712 270 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 EIF3GO75821 320 aaKnown RBP eCLIP4.76□□□□□ -1.65
SSX9-202ENST00000608568 ATG12O94817 140 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 MT-CYBP00156 380 aaPredicted RBP4.76□□□□□ -1.65
SSX9-202ENST00000608568 HPP00738 406 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 PLATP00750 562 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 GHRHP01286 108 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 IFNA2P01563 188 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 APOC3P02656 99 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 ESR1P03372 595 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 RLN2P04090 185 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 CFIP05156 583 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 STSP08842 583 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 ACAA1P09110 424 aaPredicted RBP4.76□□□□□ -1.65
SSX9-202ENST00000608568 UBBP0CG47 229 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 UBCP0CG48 685 aaKnown RBP4.76□□□□□ -1.65
SSX9-202ENST00000608568 CD59P13987 128 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 NFYAP23511 347 aaPredicted RBP4.76□□□□□ -1.65
SSX9-202ENST00000608568 AZGP1P25311 298 aaKnown RBP4.76□□□□□ -1.65
SSX9-202ENST00000608568 PTPN3P26045 913 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 RBMS1P29558 406 aaKnown RBP4.76□□□□□ -1.65
SSX9-202ENST00000608568 NTSR1P30989 418 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 ATP5C1P36542 298 aaKnown RBP4.76□□□□□ -1.65
SSX9-202ENST00000608568 MNDAP41218 407 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 CSKP41240 450 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 SLC1A3P43003 542 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 PREPP48147 710 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 RFX3P48380 749 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 RPL34P49207 117 aaKnown RBP4.76□□□□□ -1.65
SSX9-202ENST00000608568 DGKGP49619 791 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 MAN2A2P49641 1150 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 STK19P49842 368 aaPredicted RBP4.76□□□□□ -1.65
SSX9-202ENST00000608568 RIDAP52758 137 aaKnown RBP4.76□□□□□ -1.65
SSX9-202ENST00000608568 CDH4P55283 916 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 GMFBP60983 142 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 RPS27AP62979 156 aaKnown RBP4.76□□□□□ -1.65
SSX9-202ENST00000608568 UBA52P62987 128 aaKnown RBP4.76□□□□□ -1.65
SSX9-202ENST00000608568 UBE2IP63279 158 aaKnown RBP4.76□□□□□ -1.65
SSX9-202ENST00000608568 PITPNAQ00169 270 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 HOXC5Q00444 222 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 ECH1Q13011 328 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 ILKQ13418 452 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 DYRK1AQ13627 763 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 ENPP2Q13822 863 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 SNTB1Q13884 538 aaKnown RBP4.76□□□□□ -1.65
SSX9-202ENST00000608568 GK2Q14410 553 aaPredicted RBP4.76□□□□□ -1.65
SSX9-202ENST00000608568 GRB7Q14451 532 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 HNF4GQ14541 408 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 ZNF234Q14588 700 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 GPR68Q15743 365 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 SSX1Q16384 188 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 NKG7Q16617 165 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 SMN1Q16637 294 aaKnown RBP4.76□□□□□ -1.65
SSX9-202ENST00000608568 MAPKAPK3Q16644 382 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 PAN3Q58A45 887 aaKnown RBP4.76□□□□□ -1.65
SSX9-202ENST00000608568 EOGTQ5NDL2 527 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 C6orf136Q5SQH8 315 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 SLC25A30Q5SVS4 291 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 FAM69AQ5T7M9 428 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 CDCP2Q5VXM1 449 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 CLEC6AQ6EIG7 209 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 OR6B2Q6IFH4 312 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 FAM180BQ6P0A1 224 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 UNC5DQ6UXZ4 953 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 BTN2A1Q7KYR7 527 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 CHMP1BQ7LBR1 199 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 FAM122BQ7Z309 247 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.76□□□□□ -1.65
SSX9-202ENST00000608568 PIP4P1Q86T03 277 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 ISCA2Q86U28 154 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 LRRC28Q86X40 367 aaPredicted RBP4.76□□□□□ -1.65
SSX9-202ENST00000608568 CCDC71Q8IV32 467 aaPredicted RBP4.76□□□□□ -1.65
SSX9-202ENST00000608568 DENND1CQ8IV53 801 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 CEP97Q8IW35 865 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 FAM217AQ8IXS0 508 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 FTMTQ8N4E7 242 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 EID2Q8N6I1 236 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 DCBLD1Q8N8Z6 715 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 FAM71CQ8NEG0 241 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 IPMKQ8NFU5 416 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 OR11H7Q8NGC8 314 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 OR56A4Q8NGH8 313 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 UBA3Q8TBC4 463 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 NANPQ8TBE9 248 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 STAG3L4Q8TBR4 150 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 TCTEX1D2Q8WW35 142 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 RFT1Q96AA3 541 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 SLC25A36Q96CQ1 311 aa4.76□□□□□ -1.65
SSX9-202ENST00000608568 OTUB2Q96DC9 234 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms