RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 STOML1Q9UBI4 398 aa6.85□□□□□ -1.31
CUX1-219ENST00000606749 TMED5Q9Y3A6 229 aa6.85□□□□□ -1.31
CUX1-219ENST00000606749 FIS1Q9Y3D6 152 aa6.85□□□□□ -1.31
CUX1-219ENST00000606749 TRAF6Q9Y4K3 522 aa6.85□□□□□ -1.31
CUX1-219ENST00000606749 ANKHD1Q8IWZ3 2542 aaKnown RBP6.85□□□□□ -1.31
CUX1-219ENST00000606749 A0A087WZY1 265 aa6.84□□□□□ -1.31
CUX1-219ENST00000606749 TLDC2A0PJX2 215 aa6.84□□□□□ -1.31
CUX1-219ENST00000606749 ADAMDEC1O15204 470 aa6.84□□□□□ -1.31
CUX1-219ENST00000606749 OXSR1O95747 527 aaPredicted RBP6.84□□□□□ -1.31
CUX1-219ENST00000606749 CHEK2O96017 543 aa6.84□□□□□ -1.31
CUX1-219ENST00000606749 OPN1LWP04000 364 aa6.84□□□□□ -1.31
CUX1-219ENST00000606749 CHRNGP07510 517 aa6.84□□□□□ -1.31
CUX1-219ENST00000606749 CD8BP10966 210 aa6.84□□□□□ -1.31
CUX1-219ENST00000606749 NEFHP12036 1026 aa6.84□□□□□ -1.31
CUX1-219ENST00000606749 BCKDHAP12694 445 aa6.84□□□□□ -1.31
CUX1-219ENST00000606749 POU2F1P14859 743 aa6.84□□□□□ -1.31
CUX1-219ENST00000606749 IL11P20809 199 aa6.84□□□□□ -1.31
CUX1-219ENST00000606749 EFNA1P20827 205 aaPredicted RBP6.84□□□□□ -1.31
CUX1-219ENST00000606749 CRYGSP22914 178 aa6.84□□□□□ -1.31
CUX1-219ENST00000606749 PSMA4P25789 261 aaKnown RBP6.84□□□□□ -1.31
CUX1-219ENST00000606749 LCN1P31025 176 aa6.84□□□□□ -1.31
CUX1-219ENST00000606749 ASMTP46597 345 aa6.84□□□□□ -1.31
CUX1-219ENST00000606749 KCNJ5P48544 419 aa6.84□□□□□ -1.31
CUX1-219ENST00000606749 RPS3AP61247 264 aaKnown RBP6.84□□□□□ -1.31
CUX1-219ENST00000606749 RPL38P63173 70 aaKnown RBP6.84□□□□□ -1.31
CUX1-219ENST00000606749 NKX6-1P78426 367 aaPredicted RBP6.84□□□□□ -1.31
CUX1-219ENST00000606749 FGFBP1Q14512 234 aa6.84□□□□□ -1.31
CUX1-219ENST00000606749 MLC1Q15049 377 aa6.84□□□□□ -1.31
CUX1-219ENST00000606749 DUSP5Q16690 384 aa6.84□□□□□ -1.31
CUX1-219ENST00000606749 GALNTL6Q49A17 601 aa6.84□□□□□ -1.31
CUX1-219ENST00000606749 ARL13AQ5H913 290 aaPredicted RBP6.84□□□□□ -1.31
CUX1-219ENST00000606749 EXOSC6Q5RKV6 272 aaKnown RBP6.84□□□□□ -1.31
CUX1-219ENST00000606749 CPTPQ5TA50 214 aa6.84□□□□□ -1.31
CUX1-219ENST00000606749 MFSD12Q6NUT3 480 aa6.84□□□□□ -1.31
CUX1-219ENST00000606749 FIGNL1Q6PIW4 674 aa6.84□□□□□ -1.31
CUX1-219ENST00000606749 FAM214BQ7L5A3 538 aa6.84□□□□□ -1.31
CUX1-219ENST00000606749 R3HCC1LQ7Z5L2 792 aaKnown RBP6.84□□□□□ -1.31
CUX1-219ENST00000606749 ZAR1Q86SH2 424 aa6.84□□□□□ -1.31
CUX1-219ENST00000606749 GGNQ86UU5 652 aa6.84□□□□□ -1.31
CUX1-219ENST00000606749 KRTAP1-3Q8IUG1 177 aa6.84□□□□□ -1.31
CUX1-219ENST00000606749 HOMEZQ8IX15 550 aa6.84□□□□□ -1.31
CUX1-219ENST00000606749 GTPBP8Q8N3Z3 284 aaPredicted RBP6.84□□□□□ -1.31
CUX1-219ENST00000606749 BANPQ8N9N5 519 aa6.84□□□□□ -1.31
CUX1-219ENST00000606749 OR6Y1Q8NGX8 325 aa6.84□□□□□ -1.31
CUX1-219ENST00000606749 ACTRT2Q8TDY3 377 aa6.84□□□□□ -1.31
CUX1-219ENST00000606749 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.84□□□□□ -1.312e-8■■■■■ 72.2
CUX1-219ENST00000606749 MTERF3Q96E29 417 aa6.84□□□□□ -1.31
CUX1-219ENST00000606749 MARK4Q96L34 752 aa6.84□□□□□ -1.31
CUX1-219ENST00000606749 MS4A4EQ96PG1 132 aa6.84□□□□□ -1.31
CUX1-219ENST00000606749 MED18Q9BUE0 208 aa6.84□□□□□ -1.31
CUX1-219ENST00000606749 HHATLQ9HCP6 504 aa6.84□□□□□ -1.31
CUX1-219ENST00000606749 UBQLN4Q9NRR5 601 aa6.84□□□□□ -1.31
CUX1-219ENST00000606749 SIRT3Q9NTG7 399 aaPredicted RBP6.84□□□□□ -1.31
CUX1-219ENST00000606749 ATP6V1HQ9UI12 483 aa6.84□□□□□ -1.31
CUX1-219ENST00000606749 MID2Q9UJV3 735 aa6.84□□□□□ -1.31
CUX1-219ENST00000606749 VDAC3Q9Y277 283 aa6.84□□□□□ -1.31
CUX1-219ENST00000606749 SETD2Q9BYW2 2564 aaPredicted RBP6.83□□□□□ -1.32
CUX1-219ENST00000606749 VPS13CQ709C8 3753 aa6.83□□□□□ -1.32
CUX1-219ENST00000606749 A0A0J9YW62 118 aa6.83□□□□□ -1.32
CUX1-219ENST00000606749 A0A1W2PRB8 838 aa6.83□□□□□ -1.32
CUX1-219ENST00000606749 C7orf72A4D263 438 aa6.83□□□□□ -1.32
CUX1-219ENST00000606749 TMEM233B4DJY2 109 aa6.83□□□□□ -1.32
CUX1-219ENST00000606749 EIF1AYO14602 144 aaKnown RBP6.83□□□□□ -1.32
CUX1-219ENST00000606749 PIP5K1BO14986 540 aa6.83□□□□□ -1.32
CUX1-219ENST00000606749 NPHS1O60500 1241 aa6.83□□□□□ -1.32
CUX1-219ENST00000606749 ALOX5P09917 674 aa6.83□□□□□ -1.32
CUX1-219ENST00000606749 LAMP1P11279 417 aa6.83□□□□□ -1.32
CUX1-219ENST00000606749 FCGR2AP12318 317 aa6.83□□□□□ -1.32
CUX1-219ENST00000606749 HPGDP15428 266 aa6.83□□□□□ -1.32
CUX1-219ENST00000606749 ZNF17P17021 662 aa6.83□□□□□ -1.32
CUX1-219ENST00000606749 LOXP28300 417 aaPredicted RBP6.83□□□□□ -1.32
CUX1-219ENST00000606749 CCKARP32238 428 aa6.83□□□□□ -1.32
CUX1-219ENST00000606749 EIF1AXP47813 144 aaKnown RBP6.83□□□□□ -1.32
CUX1-219ENST00000606749 SERPINB4P48594 390 aa6.83□□□□□ -1.32
CUX1-219ENST00000606749 RAC1P63000 192 aa6.83□□□□□ -1.32
CUX1-219ENST00000606749 POU6F2P78424 691 aaPredicted RBP6.83□□□□□ -1.32
CUX1-219ENST00000606749 ACKR1Q16570 336 aa6.83□□□□□ -1.32
CUX1-219ENST00000606749 CTU2Q2VPK5 515 aaKnown RBP6.83□□□□□ -1.32
CUX1-219ENST00000606749 PLPPR5Q32ZL2 321 aa6.83□□□□□ -1.32
CUX1-219ENST00000606749 CCNJQ5T5M9 372 aa6.83□□□□□ -1.32
CUX1-219ENST00000606749 SHEQ5VZ18 495 aa6.83□□□□□ -1.32
CUX1-219ENST00000606749 ANKRD34AQ69YU3 496 aa6.83□□□□□ -1.32
CUX1-219ENST00000606749 LRIG3Q6UXM1 1119 aa6.83□□□□□ -1.32
CUX1-219ENST00000606749 ZNF550Q7Z398 422 aa6.83□□□□□ -1.32
CUX1-219ENST00000606749 SZRD1Q7Z422 152 aa6.83□□□□□ -1.32
CUX1-219ENST00000606749 TRABD2AQ86V40 505 aa6.83□□□□□ -1.32
CUX1-219ENST00000606749 WDR75Q8IWA0 830 aaKnown RBP6.83□□□□□ -1.32
CUX1-219ENST00000606749 DDIASQ8IXT1 998 aa6.83□□□□□ -1.32
CUX1-219ENST00000606749 GATSQ8NAP1 163 aa6.83□□□□□ -1.32
CUX1-219ENST00000606749 OR7A2PQ8NGA2 310 aa6.83□□□□□ -1.32
CUX1-219ENST00000606749 OR10D3Q8NH80 312 aa6.83□□□□□ -1.32
CUX1-219ENST00000606749 OR2W6PQ8NHA6 318 aa6.83□□□□□ -1.32
CUX1-219ENST00000606749 FBXO30Q8TB52 745 aa6.83□□□□□ -1.32
CUX1-219ENST00000606749 POC1BQ8TC44 478 aa6.83□□□□□ -1.32
CUX1-219ENST00000606749 TWIST2Q8WVJ9 160 aa6.83□□□□□ -1.32
CUX1-219ENST00000606749 PIGTQ969N2 578 aa6.83□□□□□ -1.32
CUX1-219ENST00000606749 ZBTB8AQ96BR9 441 aa6.83□□□□□ -1.32
CUX1-219ENST00000606749 FAM120BQ96EK7 910 aaKnown RBP6.83□□□□□ -1.32
CUX1-219ENST00000606749 PIK3IP1Q96FE7 263 aa6.83□□□□□ -1.32
CUX1-219ENST00000606749 OTUB1Q96FW1 271 aaPredicted RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms