RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 KLHL17Q6TDP4 642 aa18.55■□□□□ 0.56
PNKP-214ENST00000600573 ZNF836Q6ZNA1 936 aa18.55■□□□□ 0.56
PNKP-214ENST00000600573 GRAMD2AQ8IUY3 354 aa18.55■□□□□ 0.56
PNKP-214ENST00000600573 CCDC71Q8IV32 467 aaPredicted RBP18.55■□□□□ 0.56
PNKP-214ENST00000600573 SUMF1Q8NBK3 374 aa18.55■□□□□ 0.56
PNKP-214ENST00000600573 C17orf47Q8NEP4 570 aa18.55■□□□□ 0.56
PNKP-214ENST00000600573 FAM81AQ8TBF8 368 aa18.55■□□□□ 0.56
PNKP-214ENST00000600573 TMIGD2Q96BF3 282 aa18.55■□□□□ 0.56
PNKP-214ENST00000600573 TUBA1CQ9BQE3 449 aa18.55■□□□□ 0.56
PNKP-214ENST00000600573 EDEM2Q9BV94 578 aa18.55■□□□□ 0.56
PNKP-214ENST00000600573 DGCR6LQ9BY27 220 aa18.55■□□□□ 0.56
PNKP-214ENST00000600573 ITPAQ9BY32 194 aa18.55■□□□□ 0.56
PNKP-214ENST00000600573 OR8D2Q9GZM6 311 aa18.55■□□□□ 0.56
PNKP-214ENST00000600573 COMMD3-BMI1R4GMX3 469 aa18.55■□□□□ 0.56
PNKP-214ENST00000600573 CDHR4A6H8M9 788 aa18.54■□□□□ 0.56
PNKP-214ENST00000600573 FRG2CA6NGY1 282 aa18.54■□□□□ 0.56
PNKP-214ENST00000600573 GASTP01350 101 aa18.54■□□□□ 0.56
PNKP-214ENST00000600573 LAMA1P25391 3075 aa18.54■□□□□ 0.56
PNKP-214ENST00000600573 FMO3P31513 532 aa18.54■□□□□ 0.56
PNKP-214ENST00000600573 ATP12AP54707 1039 aa18.54■□□□□ 0.56
PNKP-214ENST00000600573 TAS2R41P59536 307 aa18.54■□□□□ 0.56
PNKP-214ENST00000600573 TRAM2Q15035 370 aa18.54■□□□□ 0.56
PNKP-214ENST00000600573 NPSR1Q6W5P4 371 aa18.54■□□□□ 0.56
PNKP-214ENST00000600573 LAPTM4BQ86VI4 370 aa18.54■□□□□ 0.56
PNKP-214ENST00000600573 CLIP4Q8N3C7 705 aa18.54■□□□□ 0.56
PNKP-214ENST00000600573 SLC38A4Q969I6 547 aa18.54■□□□□ 0.56
PNKP-214ENST00000600573 LCORQ96JN0 433 aaPredicted RBP18.54■□□□□ 0.56
PNKP-214ENST00000600573 CCNB1IP1Q9NPC3 277 aa18.54■□□□□ 0.56
PNKP-214ENST00000600573 C19orf25Q9UFG5 118 aaPredicted RBP18.54■□□□□ 0.56
PNKP-214ENST00000600573 CHST2Q9Y4C5 530 aa18.54■□□□□ 0.56
PNKP-214ENST00000600573 PCDHGA1Q9Y5H4 931 aa18.54■□□□□ 0.56
PNKP-214ENST00000600573 SPTBP11277 2137 aa18.54■□□□□ 0.56
PNKP-214ENST00000600573 FOXD2O60548 495 aaPredicted RBP18.53■□□□□ 0.56
PNKP-214ENST00000600573 FAM20BO75063 409 aa18.53■□□□□ 0.56
PNKP-214ENST00000600573 CBFA2T3O75081 653 aa18.53■□□□□ 0.56
PNKP-214ENST00000600573 ALOX12BO75342 701 aa18.53■□□□□ 0.56
PNKP-214ENST00000600573 CDK4P11802 303 aa18.53■□□□□ 0.56
PNKP-214ENST00000600573 POU2F1P14859 743 aa18.53■□□□□ 0.56
PNKP-214ENST00000600573 EMP2P54851 167 aa18.53■□□□□ 0.56
PNKP-214ENST00000600573 SH3BGRP55822 239 aaPredicted RBP18.53■□□□□ 0.56
PNKP-214ENST00000600573 CSNK2BP67870 215 aa18.53■□□□□ 0.56
PNKP-214ENST00000600573 COX10Q12887 443 aa18.53■□□□□ 0.56
PNKP-214ENST00000600573 FOXD4Q12950 439 aaPredicted RBP18.53■□□□□ 0.56
PNKP-214ENST00000600573 SF3A2Q15428 464 aaKnown RBP18.53■□□□□ 0.56
PNKP-214ENST00000600573 NEDD8Q15843 81 aa18.53■□□□□ 0.56
PNKP-214ENST00000600573 HLA-DQA1Q5Y7H0 255 aa18.53■□□□□ 0.56
PNKP-214ENST00000600573 PGBD2Q6P3X8 592 aa18.53■□□□□ 0.56
PNKP-214ENST00000600573 PODNL1Q6PEZ8 512 aa18.53■□□□□ 0.56
PNKP-214ENST00000600573 ENTHD1Q8IYW4 607 aa18.53■□□□□ 0.56
PNKP-214ENST00000600573 BCORP1Q8N888 145 aa18.53■□□□□ 0.56
PNKP-214ENST00000600573 SLC7A13Q8TCU3 470 aa18.53■□□□□ 0.56
PNKP-214ENST00000600573 NODALQ96S42 347 aa18.53■□□□□ 0.56
PNKP-214ENST00000600573 APMAPQ9HDC9 416 aa18.53■□□□□ 0.56
PNKP-214ENST00000600573 MAN2C1Q9NTJ4 1040 aa18.53■□□□□ 0.56
PNKP-214ENST00000600573 SLC39A1Q9NY26 324 aa18.53■□□□□ 0.56
PNKP-214ENST00000600573 PTTG2Q9NZH5 202 aa18.53■□□□□ 0.56
PNKP-214ENST00000600573 RSL24D1Q9UHA3 163 aaKnown RBP18.53■□□□□ 0.56
PNKP-214ENST00000600573 GPN3Q9UHW5 284 aaPredicted RBP18.53■□□□□ 0.56
PNKP-214ENST00000600573 RNF6Q9Y252 685 aa18.53■□□□□ 0.56
PNKP-214ENST00000600573 C2orf92A0A1B0GVN3 265 aa18.52■□□□□ 0.56
PNKP-214ENST00000600573 A8MUA0 341 aa18.52■□□□□ 0.56
PNKP-214ENST00000600573 IDSB3KWA1 339 aa18.52■□□□□ 0.56
PNKP-214ENST00000600573 TO15178 435 aa18.52■□□□□ 0.56
PNKP-214ENST00000600573 MRPS14O60783 128 aaKnown RBP18.52■□□□□ 0.56
PNKP-214ENST00000600573 CYP7B1O75881 506 aa18.52■□□□□ 0.56
PNKP-214ENST00000600573 HTR1AP08908 422 aa18.52■□□□□ 0.56
PNKP-214ENST00000600573 OSMP13725 252 aa18.52■□□□□ 0.56
PNKP-214ENST00000600573 PAX7P23759 505 aa18.52■□□□□ 0.56
PNKP-214ENST00000600573 GSTT1P30711 240 aa18.52■□□□□ 0.56
PNKP-214ENST00000600573 KRT20P35900 424 aa18.52■□□□□ 0.56
PNKP-214ENST00000600573 GSSP48637 474 aa18.52■□□□□ 0.56
PNKP-214ENST00000600573 CRISP1P54107 249 aa18.52■□□□□ 0.56
PNKP-214ENST00000600573 CSRP2Q16527 193 aa18.52■□□□□ 0.56
PNKP-214ENST00000600573 MAPK14Q16539 360 aa18.52■□□□□ 0.56
PNKP-214ENST00000600573 MRPL14Q6P1L8 145 aaKnown RBP18.52■□□□□ 0.56
PNKP-214ENST00000600573 Q6ZPB1 254 aaPredicted RBP18.52■□□□□ 0.56
PNKP-214ENST00000600573 PLEKHM3Q6ZWE6 761 aa18.52■□□□□ 0.56
PNKP-214ENST00000600573 SLC29A4Q7RTT9 530 aa18.52■□□□□ 0.56
PNKP-214ENST00000600573 SPARTQ8N0X7 666 aa18.52■□□□□ 0.56
PNKP-214ENST00000600573 MCHR1Q99705 422 aa18.52■□□□□ 0.56
PNKP-214ENST00000600573 RASSF1Q9NS23 344 aa18.52■□□□□ 0.56
PNKP-214ENST00000600573 FBXO34Q9NWN3 711 aa18.52■□□□□ 0.56
PNKP-214ENST00000600573 IMPAD1Q9NX62 359 aa18.52■□□□□ 0.56
PNKP-214ENST00000600573 TESQ9UGI8 421 aaKnown RBP18.52■□□□□ 0.56
PNKP-214ENST00000600573 PPIEQ9UNP9 301 aaKnown RBP18.52■□□□□ 0.56
PNKP-214ENST00000600573 DTX4Q9Y2E6 619 aa18.52■□□□□ 0.56
PNKP-214ENST00000600573 ZAR1LA6NP61 321 aa18.52■□□□□ 0.55
PNKP-214ENST00000600573 NPIPB9F8W1W9 429 aa18.52■□□□□ 0.55
PNKP-214ENST00000600573 H3BSA7 217 aa18.52■□□□□ 0.55
PNKP-214ENST00000600573 XPNPEP2O43895 674 aa18.52■□□□□ 0.55
PNKP-214ENST00000600573 RFPL3O75679 317 aa18.52■□□□□ 0.55
PNKP-214ENST00000600573 IL33O95760 270 aa18.52■□□□□ 0.55
PNKP-214ENST00000600573 CDC42P60953 191 aa18.52■□□□□ 0.55
PNKP-214ENST00000600573 PMS2P3Q13401 168 aa18.52■□□□□ 0.55
PNKP-214ENST00000600573 RAB39AQ14964 217 aa18.52■□□□□ 0.55
PNKP-214ENST00000600573 MRPL2Q5T653 305 aaKnown RBP18.52■□□□□ 0.55
PNKP-214ENST00000600573 B3GNT6Q6ZMB0 384 aa18.52■□□□□ 0.55
PNKP-214ENST00000600573 ZNF550Q7Z398 422 aa18.52■□□□□ 0.55
PNKP-214ENST00000600573 P3H2Q8IVL5 708 aa18.52■□□□□ 0.55
PNKP-214ENST00000600573 PRSS58Q8IYP2 241 aa18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms