RNA–Protein interactions for RNA: ENST00000599044.1

CCDC61-207, Transcript of coiled-coil domain containing 61, humanhuman

TSL 2

Gene CCDC61, Length 849 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-207ENST00000599044 DNASE1P24855 282 aa20.62■□□□□ 0.89
CCDC61-207ENST00000599044 KIR2DL2P43627 348 aaPredicted RBP20.62■□□□□ 0.89
CCDC61-207ENST00000599044 CLK3P49761 638 aaKnown RBP20.62■□□□□ 0.89
CCDC61-207ENST00000599044 PSMD4P55036 377 aaKnown RBP20.62■□□□□ 0.89
CCDC61-207ENST00000599044 C17orf67Q0P5P2 114 aa20.62■□□□□ 0.89
CCDC61-207ENST00000599044 GANABQ14697 944 aaKnown RBP20.62■□□□□ 0.89
CCDC61-207ENST00000599044 DUSP5Q16690 384 aa20.62■□□□□ 0.89
CCDC61-207ENST00000599044 CHMP1BQ7LBR1 199 aa20.62■□□□□ 0.89
CCDC61-207ENST00000599044 SZRD1Q7Z422 152 aa20.62■□□□□ 0.89
CCDC61-207ENST00000599044 CNEP1R1Q8N9A8 125 aa20.62■□□□□ 0.89
CCDC61-207ENST00000599044 ANKRD42Q8N9B4 389 aa20.62■□□□□ 0.89
CCDC61-207ENST00000599044 GATSQ8NAP1 163 aa20.62■□□□□ 0.89
CCDC61-207ENST00000599044 FAM110BQ8TC76 370 aa20.62■□□□□ 0.89
CCDC61-207ENST00000599044 SMPDL3BQ92485 455 aa20.62■□□□□ 0.89
CCDC61-207ENST00000599044 ZBED6CLQ96FA7 236 aaPredicted RBP20.62■□□□□ 0.89
CCDC61-207ENST00000599044 C3orf30Q96M34 536 aa20.62■□□□□ 0.89
CCDC61-207ENST00000599044 DACH2Q96NX9 599 aa20.62■□□□□ 0.89
CCDC61-207ENST00000599044 PINK1Q9BXM7 581 aa20.62■□□□□ 0.89
CCDC61-207ENST00000599044 C3orf14Q9HBI5 128 aa20.62■□□□□ 0.89
CCDC61-207ENST00000599044 SIRT3Q9NTG7 399 aaPredicted RBP20.62■□□□□ 0.89
CCDC61-207ENST00000599044 TTC36A6NLP5 189 aa20.61■□□□□ 0.89
CCDC61-207ENST00000599044 TM9SF1O15321 606 aa20.61■□□□□ 0.89
CCDC61-207ENST00000599044 TNFRSF21O75509 655 aa20.61■□□□□ 0.89
CCDC61-207ENST00000599044 SMNDC1O75940 238 aaKnown RBP eCLIP20.61■□□□□ 0.89
CCDC61-207ENST00000599044 KCNK2O95069 426 aa20.61■□□□□ 0.89
CCDC61-207ENST00000599044 CHEK2O96017 543 aa20.61■□□□□ 0.89
CCDC61-207ENST00000599044 CPOXP36551 454 aa20.61■□□□□ 0.89
CCDC61-207ENST00000599044 SIRPAP78324 504 aa20.61■□□□□ 0.89
CCDC61-207ENST00000599044 MFSD12Q6NUT3 480 aa20.61■□□□□ 0.89
CCDC61-207ENST00000599044 ZNF474Q6S9Z5 364 aaPredicted RBP20.61■□□□□ 0.89
CCDC61-207ENST00000599044 PAMR1Q6UXH9 720 aa20.61■□□□□ 0.89
CCDC61-207ENST00000599044 GGNQ86UU5 652 aa20.61■□□□□ 0.89
CCDC61-207ENST00000599044 CDRT4Q8N9R6 151 aa20.61■□□□□ 0.89
CCDC61-207ENST00000599044 OR7A2PQ8NGA2 310 aa20.61■□□□□ 0.89
CCDC61-207ENST00000599044 CEP70Q8NHQ1 597 aa20.61■□□□□ 0.89
CCDC61-207ENST00000599044 ZFP28Q8NHY6 868 aa20.61■□□□□ 0.89
CCDC61-207ENST00000599044 FNDC9Q8TBE3 224 aa20.61■□□□□ 0.89
CCDC61-207ENST00000599044 PIGQQ9BRB3 760 aa20.61■□□□□ 0.89
CCDC61-207ENST00000599044 OPN3Q9H1Y3 402 aaPredicted RBP20.61■□□□□ 0.89
CCDC61-207ENST00000599044 ACSS1Q9NUB1 689 aaPredicted RBP20.61■□□□□ 0.89
CCDC61-207ENST00000599044 VDAC3Q9Y277 283 aa20.61■□□□□ 0.89
CCDC61-207ENST00000599044 TMED5Q9Y3A6 229 aa20.61■□□□□ 0.89
CCDC61-207ENST00000599044 HMGB1P1B2RPK0 211 aaPredicted RBP20.6■□□□□ 0.89
CCDC61-207ENST00000599044 MSTNO14793 375 aa20.6■□□□□ 0.89
CCDC61-207ENST00000599044 EMC8O43402 210 aa20.6■□□□□ 0.89
CCDC61-207ENST00000599044 PEX11AO75192 247 aa20.6■□□□□ 0.89
CCDC61-207ENST00000599044 ATE1O95260 518 aa20.6■□□□□ 0.89
CCDC61-207ENST00000599044 OXSR1O95747 527 aaPredicted RBP20.6■□□□□ 0.89
CCDC61-207ENST00000599044 DHRS4L1P0CG22 281 aa20.6■□□□□ 0.89
CCDC61-207ENST00000599044 CD99P14209 185 aa20.6■□□□□ 0.89
CCDC61-207ENST00000599044 DIO3P55073 304 aa20.6■□□□□ 0.89
CCDC61-207ENST00000599044 KRTAP21-3Q3LHN1 58 aa20.6■□□□□ 0.89
CCDC61-207ENST00000599044 GLYR1Q49A26 553 aaPredicted RBP20.6■□□□□ 0.89
CCDC61-207ENST00000599044 XKR7Q5GH72 579 aa20.6■□□□□ 0.89
CCDC61-207ENST00000599044 EXOSC6Q5RKV6 272 aaKnown RBP20.6■□□□□ 0.89
CCDC61-207ENST00000599044 CCNJQ5T5M9 372 aa20.6■□□□□ 0.89
CCDC61-207ENST00000599044 TGIF2LYQ8IUE0 185 aa20.6■□□□□ 0.89
CCDC61-207ENST00000599044 PKNOX2Q96KN3 472 aa20.6■□□□□ 0.89
CCDC61-207ENST00000599044 MS4A4EQ96PG1 132 aa20.6■□□□□ 0.89
CCDC61-207ENST00000599044 RNF122Q9H9V4 155 aa20.6■□□□□ 0.89
CCDC61-207ENST00000599044 ATP6V1HQ9UI12 483 aa20.6■□□□□ 0.89
CCDC61-207ENST00000599044 ZDHHC2Q9UIJ5 367 aa20.6■□□□□ 0.89
CCDC61-207ENST00000599044 ALG1L2C9J202 215 aa20.59■□□□□ 0.89
CCDC61-207ENST00000599044 ATP8B1O43520 1251 aa20.59■□□□□ 0.89
CCDC61-207ENST00000599044 DIAPH2O60879 1101 aa20.59■□□□□ 0.89
CCDC61-207ENST00000599044 CGAP01215 116 aa20.59■□□□□ 0.89
CCDC61-207ENST00000599044 OPN1LWP04000 364 aa20.59■□□□□ 0.89
CCDC61-207ENST00000599044 CRHP06850 196 aa20.59■□□□□ 0.89
CCDC61-207ENST00000599044 BPGMP07738 259 aa20.59■□□□□ 0.89
CCDC61-207ENST00000599044 LAMP1P11279 417 aa20.59■□□□□ 0.89
CCDC61-207ENST00000599044 SERPINB4P48594 390 aa20.59■□□□□ 0.89
CCDC61-207ENST00000599044 WDR4P57081 412 aaKnown RBP20.59■□□□□ 0.89
CCDC61-207ENST00000599044 EEF1A1P68104 462 aaKnown RBP20.59■□□□□ 0.89
CCDC61-207ENST00000599044 PON3Q15166 354 aa20.59■□□□□ 0.89
CCDC61-207ENST00000599044 VPS26BQ4G0F5 336 aa20.59■□□□□ 0.89
CCDC61-207ENST00000599044 EEF1A1P5Q5VTE0 462 aa20.59■□□□□ 0.89
CCDC61-207ENST00000599044 OR2A2Q6IF42 318 aa20.59■□□□□ 0.89
CCDC61-207ENST00000599044 MTERF3Q96E29 417 aa20.59■□□□□ 0.89
CCDC61-207ENST00000599044 FAM120BQ96EK7 910 aaKnown RBP20.59■□□□□ 0.89
CCDC61-207ENST00000599044 WFIKKN1Q96NZ8 548 aa20.59■□□□□ 0.89
CCDC61-207ENST00000599044 LINC01387J3KSC0 135 aa20.58■□□□□ 0.89
CCDC61-207ENST00000599044 SCAMP2O15127 329 aaKnown RBP20.58■□□□□ 0.89
CCDC61-207ENST00000599044 SIAH2O43255 324 aa20.58■□□□□ 0.89
CCDC61-207ENST00000599044 NDUFB5O43674 189 aa20.58■□□□□ 0.89
CCDC61-207ENST00000599044 AQP8O94778 261 aa20.58■□□□□ 0.89
CCDC61-207ENST00000599044 KLK2P20151 261 aa20.58■□□□□ 0.89
CCDC61-207ENST00000599044 TBXA2RP21731 343 aa20.58■□□□□ 0.89
CCDC61-207ENST00000599044 ASMTP46597 345 aa20.58■□□□□ 0.89
CCDC61-207ENST00000599044 SLC6A8P48029 635 aa20.58■□□□□ 0.89
CCDC61-207ENST00000599044 EEFSECP57772 596 aaKnown RBP20.58■□□□□ 0.89
CCDC61-207ENST00000599044 PTGR1Q14914 329 aa20.58■□□□□ 0.89
CCDC61-207ENST00000599044 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.58■□□□□ 0.89
CCDC61-207ENST00000599044 METTL25Q8N6Q8 603 aa20.58■□□□□ 0.89
CCDC61-207ENST00000599044 MGARPQ8TDB4 240 aa20.58■□□□□ 0.89
CCDC61-207ENST00000599044 MBD6Q96DN6 1003 aa20.58■□□□□ 0.89
CCDC61-207ENST00000599044 C1orf50Q9BV19 199 aa20.58■□□□□ 0.89
CCDC61-207ENST00000599044 EML4Q9HC35 981 aaKnown RBP20.58■□□□□ 0.89
CCDC61-207ENST00000599044 TESMINQ9Y4I5 508 aa20.58■□□□□ 0.89
CCDC61-207ENST00000599044 AP4B1Q9Y6B7 739 aa20.58■□□□□ 0.89
CCDC61-207ENST00000599044 WDR91A4D1P6 747 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms