RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 IFNA8P32881 189 aa14.21□□□□□ -0.13
UPF1-206ENST00000598471 OR1E2P47887 323 aa14.21□□□□□ -0.13
UPF1-206ENST00000598471 RGS8P57771 180 aaPredicted RBP14.21□□□□□ -0.13
UPF1-206ENST00000598471 MLF1P58340 268 aa14.21□□□□□ -0.13
UPF1-206ENST00000598471 VLDLRP98155 873 aa14.21□□□□□ -0.13
UPF1-206ENST00000598471 Q0VFX4 171 aa14.21□□□□□ -0.13
UPF1-206ENST00000598471 FGFBP1Q14512 234 aa14.21□□□□□ -0.13
UPF1-206ENST00000598471 NRF1Q16656 503 aa14.21□□□□□ -0.13
UPF1-206ENST00000598471 GLIPR1L2Q4G1C9 344 aa14.21□□□□□ -0.13
UPF1-206ENST00000598471 MRPL2Q5T653 305 aaKnown RBP14.21□□□□□ -0.13
UPF1-206ENST00000598471 C16orf47Q6ZP98 133 aaPredicted RBP14.21□□□□□ -0.13
UPF1-206ENST00000598471 AMER2Q8N7J2 671 aa14.21□□□□□ -0.13
UPF1-206ENST00000598471 OR4C3Q8NH37 302 aa14.21□□□□□ -0.13
UPF1-206ENST00000598471 VANGL1Q8TAA9 524 aaPredicted RBP14.21□□□□□ -0.13
UPF1-206ENST00000598471 SNIP1Q8TAD8 396 aaKnown RBP14.21□□□□□ -0.13
UPF1-206ENST00000598471 ASB15Q8WXK1 588 aa14.21□□□□□ -0.13
UPF1-206ENST00000598471 NR4A3Q92570 626 aa14.21□□□□□ -0.13
UPF1-206ENST00000598471 TTC9Q92623 222 aa14.21□□□□□ -0.13
UPF1-206ENST00000598471 SLC35B4Q969S0 331 aa14.21□□□□□ -0.13
UPF1-206ENST00000598471 SPACA9Q96E40 222 aaPredicted RBP14.21□□□□□ -0.13
UPF1-206ENST00000598471 CENPNQ96H22 339 aaPredicted RBP14.21□□□□□ -0.13
UPF1-206ENST00000598471 NAF1Q96HR8 494 aaKnown RBP14.21□□□□□ -0.13
UPF1-206ENST00000598471 C7orf34Q96L11 122 aa14.21□□□□□ -0.13
UPF1-206ENST00000598471 ARHGDIGQ99819 225 aa14.21□□□□□ -0.13
UPF1-206ENST00000598471 TBL1XR1Q9BZK7 514 aa14.21□□□□□ -0.13
UPF1-206ENST00000598471 ZBTB20Q9HC78 741 aaPredicted RBP14.21□□□□□ -0.13
UPF1-206ENST00000598471 HHATLQ9HCP6 504 aa14.21□□□□□ -0.13
UPF1-206ENST00000598471 AGPAT4Q9NRZ5 378 aa14.21□□□□□ -0.13
UPF1-206ENST00000598471 ABI3Q9P2A4 366 aa14.21□□□□□ -0.13
UPF1-206ENST00000598471 NKX1-2Q9UD57 310 aaPredicted RBP14.21□□□□□ -0.13
UPF1-206ENST00000598471 KCNE5Q9UJ90 142 aa14.21□□□□□ -0.13
UPF1-206ENST00000598471 RIMS3Q9UJD0 308 aa14.21□□□□□ -0.13
UPF1-206ENST00000598471 ABCG2Q9UNQ0 655 aa14.21□□□□□ -0.13
UPF1-206ENST00000598471 POLHQ9Y253 713 aa14.21□□□□□ -0.13
UPF1-206ENST00000598471 ENPP4Q9Y6X5 453 aa14.21□□□□□ -0.13
UPF1-206ENST00000598471 CENPVL1A0A0U1RR11 272 aa14.2□□□□□ -0.14
UPF1-206ENST00000598471 A0A1W2PQD3 144 aa14.2□□□□□ -0.14
UPF1-206ENST00000598471 CDHR4A6H8M9 788 aa14.2□□□□□ -0.14
UPF1-206ENST00000598471 M0R3H8 397 aa14.2□□□□□ -0.14
UPF1-206ENST00000598471 AP3D1O14617 1153 aa14.2□□□□□ -0.14
UPF1-206ENST00000598471 KLK10O43240 276 aa14.2□□□□□ -0.14
UPF1-206ENST00000598471 ICOSLGO75144 302 aa14.2□□□□□ -0.14
UPF1-206ENST00000598471 UGT2B11O75310 529 aa14.2□□□□□ -0.14
UPF1-206ENST00000598471 CSTAP01040 98 aa14.2□□□□□ -0.14
UPF1-206ENST00000598471 ADH7P40394 386 aa14.2□□□□□ -0.14
UPF1-206ENST00000598471 MEP1AQ16819 746 aa14.2□□□□□ -0.14
UPF1-206ENST00000598471 KLHL26Q53HC5 615 aa14.2□□□□□ -0.14
UPF1-206ENST00000598471 H3F3CQ6NXT2 135 aa14.2□□□□□ -0.14
UPF1-206ENST00000598471 UNQ6494/PRO21346Q6UXR6 183 aa14.2□□□□□ -0.14
UPF1-206ENST00000598471 DEF8Q6ZN54 512 aa14.2□□□□□ -0.14
UPF1-206ENST00000598471 RANBP3LQ86VV4 465 aaPredicted RBP14.2□□□□□ -0.14
UPF1-206ENST00000598471 GRAMD2AQ8IUY3 354 aa14.2□□□□□ -0.14
UPF1-206ENST00000598471 ZNF440Q8IYI8 595 aa14.2□□□□□ -0.14
UPF1-206ENST00000598471 TMEM156Q8N614 296 aa14.2□□□□□ -0.14
UPF1-206ENST00000598471 BRIX1Q8TDN6 353 aaKnown RBP14.2□□□□□ -0.14
UPF1-206ENST00000598471 APOBEC4Q8WW27 367 aaKnown RBP14.2□□□□□ -0.14
UPF1-206ENST00000598471 CNTNAP3BQ96NU0 1288 aa14.2□□□□□ -0.14
UPF1-206ENST00000598471 ZNF300Q96RE9 604 aaPredicted RBP14.2□□□□□ -0.14
UPF1-206ENST00000598471 CNTNAP3Q9BZ76 1288 aa14.2□□□□□ -0.14
UPF1-206ENST00000598471 LHPPQ9H008 270 aa14.2□□□□□ -0.14
UPF1-206ENST00000598471 NDUFAF4Q9P032 175 aa14.2□□□□□ -0.14
UPF1-206ENST00000598471 GTPBP1O00178 669 aaKnown RBP14.19□□□□□ -0.14
UPF1-206ENST00000598471 TAF4O00268 1085 aa14.19□□□□□ -0.14
UPF1-206ENST00000598471 ADAMDEC1O15204 470 aa14.19□□□□□ -0.14
UPF1-206ENST00000598471 DPM1O60762 260 aa14.19□□□□□ -0.14
UPF1-206ENST00000598471 DNAJB5O75953 348 aa14.19□□□□□ -0.14
UPF1-206ENST00000598471 PRKAR1AP10644 381 aa14.19□□□□□ -0.14
UPF1-206ENST00000598471 UBL4AP11441 157 aa14.19□□□□□ -0.14
UPF1-206ENST00000598471 RHCEP18577 417 aa14.19□□□□□ -0.14
UPF1-206ENST00000598471 EVI2BP34910 448 aa14.19□□□□□ -0.14
UPF1-206ENST00000598471 SOX3P41225 446 aa14.19□□□□□ -0.14
UPF1-206ENST00000598471 FBXW4P57775 412 aa14.19□□□□□ -0.14
UPF1-206ENST00000598471 CDC20Q12834 499 aa14.19□□□□□ -0.14
UPF1-206ENST00000598471 TRIP10Q15642 601 aa14.19□□□□□ -0.14
UPF1-206ENST00000598471 NTRK2Q16620 822 aa14.19□□□□□ -0.14
UPF1-206ENST00000598471 OR2T5Q6IEZ7 315 aa14.19□□□□□ -0.14
UPF1-206ENST00000598471 ZNF550Q7Z398 422 aa14.19□□□□□ -0.14
UPF1-206ENST00000598471 AMIGO2Q86SJ2 522 aa14.19□□□□□ -0.14
UPF1-206ENST00000598471 MISPQ8IVT2 679 aa14.19□□□□□ -0.14
UPF1-206ENST00000598471 GPALPP1Q8IXQ4 340 aa14.19□□□□□ -0.14
UPF1-206ENST00000598471 LILRA2Q8N149 483 aa14.19□□□□□ -0.14
UPF1-206ENST00000598471 CLIP4Q8N3C7 705 aa14.19□□□□□ -0.14
UPF1-206ENST00000598471 SIRT6Q8N6T7 355 aa14.19□□□□□ -0.14
UPF1-206ENST00000598471 OR5M3Q8NGP4 307 aa14.19□□□□□ -0.14
UPF1-206ENST00000598471 OR2T29Q8NH02 315 aa14.19□□□□□ -0.14
UPF1-206ENST00000598471 PHOSPHO1Q8TCT1 267 aa14.19□□□□□ -0.14
UPF1-206ENST00000598471 HGDQ93099 445 aa14.19□□□□□ -0.14
UPF1-206ENST00000598471 CCNL2Q96S94 520 aaPredicted RBP14.19□□□□□ -0.14
UPF1-206ENST00000598471 AMBRA1Q9C0C7 1298 aa14.19□□□□□ -0.14
UPF1-206ENST00000598471 VCX3BQ9H321 246 aa14.19□□□□□ -0.14
UPF1-206ENST00000598471 REEP1Q9H902 201 aa14.19□□□□□ -0.14
UPF1-206ENST00000598471 RLIMQ9NVW2 624 aa14.19□□□□□ -0.14
UPF1-206ENST00000598471 DKK4Q9UBT3 224 aa14.19□□□□□ -0.14
UPF1-206ENST00000598471 ARGFXA6NJG6 315 aa14.18□□□□□ -0.14
UPF1-206ENST00000598471 CLDN24A6NM45 220 aa14.18□□□□□ -0.14
UPF1-206ENST00000598471 ALG1L2C9J202 215 aa14.18□□□□□ -0.14
UPF1-206ENST00000598471 MASP2O00187 686 aa14.18□□□□□ -0.14
UPF1-206ENST00000598471 NKX2-8O15522 239 aa14.18□□□□□ -0.14
UPF1-206ENST00000598471 NDUFB5O43674 189 aa14.18□□□□□ -0.14
UPF1-206ENST00000598471 ZNF354AO60765 605 aaPredicted RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms