RNA–Protein interactions for RNA: ENST00000598352.1

C19orf54-208, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 1 (best)

Gene C19orf54, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-208ENST00000598352 CLDN15P56746 228 aa11.26□□□□□ -0.61
C19orf54-208ENST00000598352 CLDN18P56856 261 aa11.26□□□□□ -0.61
C19orf54-208ENST00000598352 C17orf67Q0P5P2 114 aa11.26□□□□□ -0.61
C19orf54-208ENST00000598352 CD226Q15762 336 aa11.26□□□□□ -0.61
C19orf54-208ENST00000598352 DPY19L1Q2PZI1 675 aa11.26□□□□□ -0.61
C19orf54-208ENST00000598352 PDCD4Q53EL6 469 aaKnown RBP11.26□□□□□ -0.61
C19orf54-208ENST00000598352 DCST2Q5T1A1 773 aa11.26□□□□□ -0.61
C19orf54-208ENST00000598352 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.26□□□□□ -0.612e-7■■■□□ 17.1
C19orf54-208ENST00000598352 AP1ARQ63HQ0 302 aa11.26□□□□□ -0.61
C19orf54-208ENST00000598352 SAXO2Q658L1 398 aa11.26□□□□□ -0.61
C19orf54-208ENST00000598352 NAXEQ8NCW5 288 aa11.26□□□□□ -0.61
C19orf54-208ENST00000598352 CHDHQ8NE62 594 aaPredicted RBP11.26□□□□□ -0.61
C19orf54-208ENST00000598352 OR5D16Q8NGK9 328 aa11.26□□□□□ -0.61
C19orf54-208ENST00000598352 OR10Q1Q8NGQ4 319 aa11.26□□□□□ -0.61
C19orf54-208ENST00000598352 ZPLD1Q8TCW7 415 aa11.26□□□□□ -0.61
C19orf54-208ENST00000598352 ADAMTS15Q8TE58 950 aa11.26□□□□□ -0.61
C19orf54-208ENST00000598352 MARK4Q96L34 752 aa11.26□□□□□ -0.61
C19orf54-208ENST00000598352 UCN2Q96RP3 112 aa11.26□□□□□ -0.61
C19orf54-208ENST00000598352 TUBA1CQ9BQE3 449 aa11.26□□□□□ -0.61
C19orf54-208ENST00000598352 INPP5KQ9BT40 448 aa11.26□□□□□ -0.61
C19orf54-208ENST00000598352 CALHM2Q9HA72 323 aa11.26□□□□□ -0.61
C19orf54-208ENST00000598352 NPDC1Q9NQX5 325 aaPredicted RBP11.26□□□□□ -0.61
C19orf54-208ENST00000598352 SDR39U1Q9NRG7 319 aaPredicted RBP11.26□□□□□ -0.61
C19orf54-208ENST00000598352 UBQLN4Q9NRR5 601 aa11.26□□□□□ -0.61
C19orf54-208ENST00000598352 ARGLU1Q9NWB6 273 aaPredicted RBP11.26□□□□□ -0.61
C19orf54-208ENST00000598352 ZNF446Q9NWS9 450 aa11.26□□□□□ -0.61
C19orf54-208ENST00000598352 BTNL2Q9UIR0 455 aa11.26□□□□□ -0.61
C19orf54-208ENST00000598352 DKKL1Q9UK85 242 aa11.26□□□□□ -0.61
C19orf54-208ENST00000598352 CAMK2AQ9UQM7 478 aa11.26□□□□□ -0.61
C19orf54-208ENST00000598352 RPH3AQ9Y2J0 694 aaPredicted RBP11.26□□□□□ -0.61
C19orf54-208ENST00000598352 KIAA1549Q9HCM3 1950 aa11.26□□□□□ -0.61
C19orf54-208ENST00000598352 NPIPA5A0A0B4J1W7 369 aa11.25□□□□□ -0.61
C19orf54-208ENST00000598352 RNF103-CHMP3A0A140T963 221 aa11.25□□□□□ -0.61
C19orf54-208ENST00000598352 NKX2-6A6NCS4 301 aa11.25□□□□□ -0.61
C19orf54-208ENST00000598352 NPIPA7E9PJI5 369 aa11.25□□□□□ -0.61
C19orf54-208ENST00000598352 HNRNPRO43390 633 aaKnown RBP11.25□□□□□ -0.61
C19orf54-208ENST00000598352 OIP5O43482 229 aa11.25□□□□□ -0.61
C19orf54-208ENST00000598352 CPSF4O95639 269 aaKnown RBP11.25□□□□□ -0.61
C19orf54-208ENST00000598352 NPIPA8P0DM63 369 aa11.25□□□□□ -0.61
C19orf54-208ENST00000598352 IDO1P14902 403 aa11.25□□□□□ -0.61
C19orf54-208ENST00000598352 ZNF708P17019 499 aa11.25□□□□□ -0.61
C19orf54-208ENST00000598352 HK1P19367 917 aa11.25□□□□□ -0.61
C19orf54-208ENST00000598352 MATN1P21941 496 aa11.25□□□□□ -0.61
C19orf54-208ENST00000598352 TCEA1P23193 301 aaKnown RBP11.25□□□□□ -0.61
C19orf54-208ENST00000598352 SOAT1P35610 550 aa11.25□□□□□ -0.61
C19orf54-208ENST00000598352 TIMP3P35625 211 aa11.25□□□□□ -0.61
C19orf54-208ENST00000598352 CLK3P49761 638 aaKnown RBP11.25□□□□□ -0.61
C19orf54-208ENST00000598352 PPP2R2AP63151 447 aa11.25□□□□□ -0.61
C19orf54-208ENST00000598352 GANABQ14697 944 aaKnown RBP11.25□□□□□ -0.61
C19orf54-208ENST00000598352 BCL2A1Q16548 175 aa11.25□□□□□ -0.61
C19orf54-208ENST00000598352 GLYR1Q49A26 553 aaPredicted RBP11.25□□□□□ -0.61
C19orf54-208ENST00000598352 NXNQ6DKJ4 435 aa11.25□□□□□ -0.61
C19orf54-208ENST00000598352 HEPHL1Q6MZM0 1159 aa11.25□□□□□ -0.61
C19orf54-208ENST00000598352 BHLHB9Q6PI77 547 aa11.25□□□□□ -0.61
C19orf54-208ENST00000598352 ARSKQ6UWY0 536 aa11.25□□□□□ -0.61
C19orf54-208ENST00000598352 IFNEQ86WN2 208 aa11.25□□□□□ -0.61
C19orf54-208ENST00000598352 LACC1Q8IV20 430 aa11.25□□□□□ -0.61
C19orf54-208ENST00000598352 ZNF295-AS1Q8N0V1 137 aa11.25□□□□□ -0.61
C19orf54-208ENST00000598352 GATSQ8NAP1 163 aa11.25□□□□□ -0.61
C19orf54-208ENST00000598352 TNIP2Q8NFZ5 429 aa11.25□□□□□ -0.61
C19orf54-208ENST00000598352 LRRC8CQ8TDW0 803 aa11.25□□□□□ -0.61
C19orf54-208ENST00000598352 CKAP2Q8WWK9 683 aa11.25□□□□□ -0.61
C19orf54-208ENST00000598352 MARVELD3Q96A59 401 aa11.25□□□□□ -0.61
C19orf54-208ENST00000598352 NEURL3Q96EH8 262 aa11.25□□□□□ -0.61
C19orf54-208ENST00000598352 SFXN2Q96NB2 322 aa11.25□□□□□ -0.61
C19orf54-208ENST00000598352 SDF2Q99470 211 aa11.25□□□□□ -0.61
C19orf54-208ENST00000598352 NPAS1Q99742 590 aa11.25□□□□□ -0.61
C19orf54-208ENST00000598352 ENKD1Q9H0I2 346 aa11.25□□□□□ -0.61
C19orf54-208ENST00000598352 KCNE5Q9UJ90 142 aa11.25□□□□□ -0.61
C19orf54-208ENST00000598352 ANKHD1Q8IWZ3 2542 aaKnown RBP11.25□□□□□ -0.61
C19orf54-208ENST00000598352 OR2M5A3KFT3 312 aa11.24□□□□□ -0.61
C19orf54-208ENST00000598352 PRAMEF27A3QJZ7 478 aa11.24□□□□□ -0.61
C19orf54-208ENST00000598352 MBD3L4A6NDZ8 208 aaPredicted RBP11.24□□□□□ -0.61
C19orf54-208ENST00000598352 MBD3L3A6NE82 208 aaPredicted RBP11.24□□□□□ -0.61
C19orf54-208ENST00000598352 MBD3L5A6NJ08 208 aaPredicted RBP11.24□□□□□ -0.61
C19orf54-208ENST00000598352 FAM90A27PA6NNH2 459 aa11.24□□□□□ -0.61
C19orf54-208ENST00000598352 UBDO15205 165 aa11.24□□□□□ -0.61
C19orf54-208ENST00000598352 NDUFB5O43674 189 aa11.24□□□□□ -0.61
C19orf54-208ENST00000598352 SLC22A3O75751 556 aa11.24□□□□□ -0.61
C19orf54-208ENST00000598352 TGDSO95455 350 aa11.24□□□□□ -0.61
C19orf54-208ENST00000598352 PGRP06401 933 aa11.24□□□□□ -0.61
C19orf54-208ENST00000598352 CDKN2CP42773 168 aa11.24□□□□□ -0.61
C19orf54-208ENST00000598352 MRPL19P49406 292 aaKnown RBP11.24□□□□□ -0.61
C19orf54-208ENST00000598352 IDH3AP50213 366 aa11.24□□□□□ -0.61
C19orf54-208ENST00000598352 ATP12AP54707 1039 aa11.24□□□□□ -0.61
C19orf54-208ENST00000598352 CASP9P55211 416 aa11.24□□□□□ -0.61
C19orf54-208ENST00000598352 SRYQ05066 204 aa11.24□□□□□ -0.61
C19orf54-208ENST00000598352 FUT5Q11128 374 aa11.24□□□□□ -0.61
C19orf54-208ENST00000598352 GSTA3Q16772 222 aa11.24□□□□□ -0.61
C19orf54-208ENST00000598352 AAGABQ6PD74 315 aa11.24□□□□□ -0.61
C19orf54-208ENST00000598352 ENPP6Q6UWR7 440 aa11.24□□□□□ -0.61
C19orf54-208ENST00000598352 PLXDC2Q6UX71 529 aa11.24□□□□□ -0.61
C19orf54-208ENST00000598352 OLIG3Q7RTU3 272 aa11.24□□□□□ -0.61
C19orf54-208ENST00000598352 C9orf106Q8NAJ2 232 aa11.24□□□□□ -0.61
C19orf54-208ENST00000598352 GLB1L3Q8NCI6 653 aaPredicted RBP11.24□□□□□ -0.61
C19orf54-208ENST00000598352 VPS37AQ8NEZ2 397 aa11.24□□□□□ -0.61
C19orf54-208ENST00000598352 OR5M1Q8NGP8 315 aa11.24□□□□□ -0.61
C19orf54-208ENST00000598352 MBD3L2Q8NHZ7 208 aaPredicted RBP11.24□□□□□ -0.61
C19orf54-208ENST00000598352 ZNF524Q96C55 264 aa11.24□□□□□ -0.61
C19orf54-208ENST00000598352 DTNBP1Q96EV8 351 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms