RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 KRTAP1-3Q8IUG1 177 aa15.89■□□□□ 0.13
SHKBP1-203ENST00000594298 SLC44A2Q8IWA5 706 aaPredicted RBP15.89■□□□□ 0.13
SHKBP1-203ENST00000594298 KRTCAP2Q8N6L1 136 aa15.89■□□□□ 0.13
SHKBP1-203ENST00000594298 VPS37AQ8NEZ2 397 aa15.89■□□□□ 0.13
SHKBP1-203ENST00000594298 NUP43Q8NFH3 380 aa15.89■□□□□ 0.13
SHKBP1-203ENST00000594298 TMCO6Q96DC7 493 aa15.89■□□□□ 0.13
SHKBP1-203ENST00000594298 DTNBP1Q96EV8 351 aa15.89■□□□□ 0.13
SHKBP1-203ENST00000594298 C18orf12Q96KH6 178 aa15.89■□□□□ 0.13
SHKBP1-203ENST00000594298 C7orf26Q96N11 449 aa15.89■□□□□ 0.13
SHKBP1-203ENST00000594298 COL21A1Q96P44 957 aa15.89■□□□□ 0.13
SHKBP1-203ENST00000594298 DUSP26Q9BV47 211 aa15.89■□□□□ 0.13
SHKBP1-203ENST00000594298 Q9N2J8 555 aa15.89■□□□□ 0.13
SHKBP1-203ENST00000594298 TAS2R10Q9NYW0 307 aa15.89■□□□□ 0.13
SHKBP1-203ENST00000594298 MRPS18CQ9Y3D5 142 aaKnown RBP15.89■□□□□ 0.13
SHKBP1-203ENST00000594298 HRNRQ86YZ3 2850 aaPredicted RBP15.89■□□□□ 0.13
SHKBP1-203ENST00000594298 A0A1W2PPR1 153 aa15.88■□□□□ 0.13
SHKBP1-203ENST00000594298 A8MXE2 369 aa15.88■□□□□ 0.13
SHKBP1-203ENST00000594298 PSMG1O95456 288 aa15.88■□□□□ 0.13
SHKBP1-203ENST00000594298 CT45A8P0DMV1 189 aa15.88■□□□□ 0.13
SHKBP1-203ENST00000594298 CT45A9P0DMV2 189 aa15.88■□□□□ 0.13
SHKBP1-203ENST00000594298 IL12BP29460 328 aa15.88■□□□□ 0.13
SHKBP1-203ENST00000594298 SRD5A2P31213 254 aa15.88■□□□□ 0.13
SHKBP1-203ENST00000594298 CPA2P48052 419 aa15.88■□□□□ 0.13
SHKBP1-203ENST00000594298 PCYT1AP49585 367 aa15.88■□□□□ 0.13
SHKBP1-203ENST00000594298 LHX2P50458 406 aa15.88■□□□□ 0.13
SHKBP1-203ENST00000594298 PSMD4P55036 377 aaKnown RBP15.88■□□□□ 0.13
SHKBP1-203ENST00000594298 DIO3P55073 304 aa15.88■□□□□ 0.13
SHKBP1-203ENST00000594298 PGS1Q32NB8 556 aa15.88■□□□□ 0.13
SHKBP1-203ENST00000594298 CT45A2Q5DJT8 189 aa15.88■□□□□ 0.13
SHKBP1-203ENST00000594298 SHEQ5VZ18 495 aa15.88■□□□□ 0.13
SHKBP1-203ENST00000594298 NXNQ6DKJ4 435 aa15.88■□□□□ 0.13
SHKBP1-203ENST00000594298 AAGABQ6PD74 315 aa15.88■□□□□ 0.13
SHKBP1-203ENST00000594298 ZCCHC12Q6PEW1 402 aa15.88■□□□□ 0.13
SHKBP1-203ENST00000594298 LUZP2Q86TE4 346 aa15.88■□□□□ 0.13
SHKBP1-203ENST00000594298 PLCZ1Q86YW0 608 aa15.88■□□□□ 0.13
SHKBP1-203ENST00000594298 TMBIM1Q969X1 311 aa15.88■□□□□ 0.13
SHKBP1-203ENST00000594298 INTS12Q96CB8 462 aaKnown RBP15.88■□□□□ 0.13
SHKBP1-203ENST00000594298 SLC35A4Q96G79 324 aa15.88■□□□□ 0.13
SHKBP1-203ENST00000594298 NTMQ9P121 344 aa15.88■□□□□ 0.13
SHKBP1-203ENST00000594298 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.87■□□□□ 0.13
SHKBP1-203ENST00000594298 CFLARO15519 480 aa15.87■□□□□ 0.13
SHKBP1-203ENST00000594298 HCRTR2O43614 444 aa15.87■□□□□ 0.13
SHKBP1-203ENST00000594298 TNFSF13O75888 250 aa15.87■□□□□ 0.13
SHKBP1-203ENST00000594298 SOX30O94993 753 aa15.87■□□□□ 0.13
SHKBP1-203ENST00000594298 EPHA3P29320 983 aa15.87■□□□□ 0.13
SHKBP1-203ENST00000594298 PRIM2P49643 509 aa15.87■□□□□ 0.13
SHKBP1-203ENST00000594298 PNLIPRP2P54317 469 aa15.87■□□□□ 0.13
SHKBP1-203ENST00000594298 PRKAG1P54619 331 aa15.87■□□□□ 0.13
SHKBP1-203ENST00000594298 CORO7P57737 925 aa15.87■□□□□ 0.13
SHKBP1-203ENST00000594298 PSG6Q00889 435 aa15.87■□□□□ 0.13
SHKBP1-203ENST00000594298 SRYQ05066 204 aa15.87■□□□□ 0.13
SHKBP1-203ENST00000594298 LTBQ06643 244 aa15.87■□□□□ 0.13
SHKBP1-203ENST00000594298 DECR1Q16698 335 aa15.87■□□□□ 0.13
SHKBP1-203ENST00000594298 DPY19L1Q2PZI1 675 aa15.87■□□□□ 0.13
SHKBP1-203ENST00000594298 HSP90B2PQ58FF3 399 aa15.87■□□□□ 0.13
SHKBP1-203ENST00000594298 ANXA8L1Q5VT79 327 aa15.87■□□□□ 0.13
SHKBP1-203ENST00000594298 SZRD1Q7Z422 152 aa15.87■□□□□ 0.13
SHKBP1-203ENST00000594298 CXorf67Q86X51 503 aaPredicted RBP15.87■□□□□ 0.13
SHKBP1-203ENST00000594298 CDRT4Q8N9R6 151 aa15.87■□□□□ 0.13
SHKBP1-203ENST00000594298 ACTRT2Q8TDY3 377 aa15.87■□□□□ 0.13
SHKBP1-203ENST00000594298 RNF138Q8WVD3 245 aa15.87■□□□□ 0.13
SHKBP1-203ENST00000594298 MOAP1Q96BY2 351 aa15.87■□□□□ 0.13
SHKBP1-203ENST00000594298 LMF2Q9BU23 707 aaKnown RBP15.87■□□□□ 0.13
SHKBP1-203ENST00000594298 WDR55Q9H6Y2 383 aaPredicted RBP15.87■□□□□ 0.13
SHKBP1-203ENST00000594298 PACSIN3Q9UKS6 424 aa15.87■□□□□ 0.13
SHKBP1-203ENST00000594298 PCDHGB4Q9UN71 923 aa15.87■□□□□ 0.13
SHKBP1-203ENST00000594298 WIF1Q9Y5W5 379 aa15.87■□□□□ 0.13
SHKBP1-203ENST00000594298 ACANP16112 2415 aa15.87■□□□□ 0.13
SHKBP1-203ENST00000594298 NIPBLQ6KC79 2804 aaeCLIP15.86■□□□□ 0.13
SHKBP1-203ENST00000594298 EXPH5Q8NEV8 1989 aa15.86■□□□□ 0.13
SHKBP1-203ENST00000594298 GOLGA8QA0A0J9YX86 632 aa15.86■□□□□ 0.13
SHKBP1-203ENST00000594298 GOLGA8OA6NCC3 632 aa15.86■□□□□ 0.13
SHKBP1-203ENST00000594298 GOLGA8NF8WBI6 632 aa15.86■□□□□ 0.13
SHKBP1-203ENST00000594298 TGDSO95455 350 aa15.86■□□□□ 0.13
SHKBP1-203ENST00000594298 INHBBP09529 407 aa15.86■□□□□ 0.13
SHKBP1-203ENST00000594298 ZNF708P17019 499 aa15.86■□□□□ 0.13
SHKBP1-203ENST00000594298 CLDN18P56856 261 aa15.86■□□□□ 0.13
SHKBP1-203ENST00000594298 NKX6-1P78426 367 aaPredicted RBP15.86■□□□□ 0.13
SHKBP1-203ENST00000594298 POU4F3Q15319 338 aa15.86■□□□□ 0.13
SHKBP1-203ENST00000594298 BCL2A1Q16548 175 aa15.86■□□□□ 0.13
SHKBP1-203ENST00000594298 SPDYE7PQ495Y7 208 aa15.86■□□□□ 0.13
SHKBP1-203ENST00000594298 BHLHB9Q6PI77 547 aa15.86■□□□□ 0.13
SHKBP1-203ENST00000594298 NPSR1Q6W5P4 371 aa15.86■□□□□ 0.13
SHKBP1-203ENST00000594298 GCNT2Q8N0V5 402 aa15.86■□□□□ 0.13
SHKBP1-203ENST00000594298 OR8J2Q8NGG1 315 aa15.86■□□□□ 0.13
SHKBP1-203ENST00000594298 CKAP2Q8WWK9 683 aa15.86■□□□□ 0.13
SHKBP1-203ENST00000594298 TESCQ96BS2 214 aa15.86■□□□□ 0.13
SHKBP1-203ENST00000594298 MAELQ96JY0 434 aaKnown RBP15.86■□□□□ 0.13
SHKBP1-203ENST00000594298 MAGEB18Q96M61 343 aa15.86■□□□□ 0.13
SHKBP1-203ENST00000594298 MS4A4EQ96PG1 132 aa15.86■□□□□ 0.13
SHKBP1-203ENST00000594298 ADOQ96SZ5 270 aa15.86■□□□□ 0.13
SHKBP1-203ENST00000594298 ZBTB18Q99592 522 aa15.86■□□□□ 0.13
SHKBP1-203ENST00000594298 SMR3AQ99954 134 aa15.86■□□□□ 0.13
SHKBP1-203ENST00000594298 EQTNQ9NQ60 294 aa15.86■□□□□ 0.13
SHKBP1-203ENST00000594298 AIG1Q9NVV5 245 aa15.86■□□□□ 0.13
SHKBP1-203ENST00000594298 NDRG3Q9UGV2 375 aa15.86■□□□□ 0.13
SHKBP1-203ENST00000594298 FBXL2Q9UKC9 423 aa15.86■□□□□ 0.13
SHKBP1-203ENST00000594298 TESMINQ9Y4I5 508 aa15.86■□□□□ 0.13
SHKBP1-203ENST00000594298 SNX8Q9Y5X2 465 aa15.86■□□□□ 0.13
SHKBP1-203ENST00000594298 USH1CQ9Y6N9 552 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms