RNA–Protein interactions for RNA: ENST00000593977.1

LINC00649-204, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 640 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-204ENST00000593977 A0A1B0GVL5 298 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 SMIM35A0A1B0GVV1 85 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 KCNU1A8MYU2 1149 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 B4DGG1 531 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 H0YIZ8 118 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 HSPB6O14558 160 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 LSM1O15116 133 aaKnown RBP3.8□□□□□ -1.8
LINC00649-204ENST00000593977 MDM4O15151 490 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 CCL16O15467 120 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 KCNN4O15554 427 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 CHMP2AO43633 222 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 JAK2O60674 1132 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 NDUFS6O75380 124 aaKnown RBP3.8□□□□□ -1.8
LINC00649-204ENST00000593977 CRTAPO75718 401 aaPredicted RBP3.8□□□□□ -1.8
LINC00649-204ENST00000593977 CDK14O94921 469 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 CLDN1O95832 211 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 PEX11BO96011 259 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 FCGR1AP12314 374 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 ZNF24P17028 368 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 ZNF10P21506 573 aaPredicted RBP3.8□□□□□ -1.8
LINC00649-204ENST00000593977 DGKAP23743 735 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 GJB2P29033 226 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 DCTDP32321 178 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 RPL9P32969 192 aaKnown RBP3.8□□□□□ -1.8
LINC00649-204ENST00000593977 CD80P33681 288 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 ARHGDIAP52565 204 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 LIMK2P53671 638 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 CLDN6P56747 220 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 KCNK10P57789 538 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 GAGE2BQ13066 116 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 PLA2G7Q13093 441 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 EXT1Q16394 746 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 DCAF4L1Q3SXM0 396 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 GAGE2EQ4V326 116 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 CEP78Q5JTW2 689 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 GRTP1Q5TC63 336 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 GAGE2AQ6NT46 116 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 C8orf74Q6P047 294 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 VSTM1Q6UX27 236 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 COLCA1Q6ZS62 124 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 CENPUQ71F23 418 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 BCDIN3DQ7Z5W3 292 aaKnown RBP3.8□□□□□ -1.8
LINC00649-204ENST00000593977 FOXRED2Q8IWF2 684 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 SFTPA2Q8IWL1 248 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 C12orf56Q8IXR9 622 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 MUC20Q8N307 709 aaPredicted RBP3.8□□□□□ -1.8
LINC00649-204ENST00000593977 RYBPQ8N488 228 aaPredicted RBP3.8□□□□□ -1.8
LINC00649-204ENST00000593977 GCSAMQ8N6F7 178 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 ARL14EPQ8N8R7 260 aaPredicted RBP3.8□□□□□ -1.8
LINC00649-204ENST00000593977 TERB1Q8NA31 727 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 KBTBD3Q8NAB2 608 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 FAM83FQ8NEG4 500 aaPredicted RBP3.8□□□□□ -1.8
LINC00649-204ENST00000593977 OR6S1Q8NH40 331 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 OR52I2Q8NH67 350 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 HMGCLL1Q8TB92 370 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 LRRC20Q8TCA0 184 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 ASB10Q8WXI3 467 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 SMPDL3BQ92485 455 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 ELMO1Q92556 727 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 PINX1Q96BK5 328 aaKnown RBP3.8□□□□□ -1.8
LINC00649-204ENST00000593977 ZG16BQ96DA0 208 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 LGALS12Q96DT0 336 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 TM4SF19Q96DZ7 209 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 THOC1Q96FV9 657 aaKnown RBP3.8□□□□□ -1.8
LINC00649-204ENST00000593977 P2RY11Q96G91 374 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 Q96MF0 132 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 VSTM2LQ96N03 204 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 CCT8L2Q96SF2 557 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 UBAC1Q9BSL1 405 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 WRAP53Q9BUR4 548 aaKnown RBP3.8□□□□□ -1.8
LINC00649-204ENST00000593977 RBM24Q9BX46 236 aaKnown RBP3.8□□□□□ -1.8
LINC00649-204ENST00000593977 TEKT3Q9BXF9 490 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 PRRG4Q9BZD6 226 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 PRRG3Q9BZD7 231 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 CIPCQ9C0C6 399 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 MFFQ9GZY8 342 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 FAM234AQ9H0X4 552 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 SEMA6AQ9H2E6 1030 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 BOLA2Q9H3K6 86 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 UBTD1Q9HAC8 227 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 MLXIPLQ9NP71 852 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 SPHK1Q9NYA1 384 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 MTCH1Q9NZJ7 389 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 C1RLQ9NZP8 487 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 HACD3Q9P035 362 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 GAGE2DQ9UEU5 116 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 ZNF639Q9UID6 485 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 ZNF346Q9UL40 294 aaKnown RBP3.8□□□□□ -1.8
LINC00649-204ENST00000593977 CA5BQ9Y2D0 317 aa3.8□□□□□ -1.8
LINC00649-204ENST00000593977 SRPRBQ9Y5M8 271 aaKnown RBP3.8□□□□□ -1.8
LINC00649-204ENST00000593977 NSD1Q96L73 2696 aaPredicted RBP3.8□□□□□ -1.8
LINC00649-204ENST00000593977 MXRA5Q9NR99 2828 aa3.79□□□□□ -1.8
LINC00649-204ENST00000593977 HYKKA2RU49 373 aa3.79□□□□□ -1.8
LINC00649-204ENST00000593977 OR2M5A3KFT3 312 aa3.79□□□□□ -1.8
LINC00649-204ENST00000593977 LRRIQ3A6PVS8 624 aaPredicted RBP3.79□□□□□ -1.8
LINC00649-204ENST00000593977 C9JVG2 144 aa3.79□□□□□ -1.8
LINC00649-204ENST00000593977 FAM90A26D6RGX4 464 aa3.79□□□□□ -1.8
LINC00649-204ENST00000593977 NPIPA3F8WFD2 350 aa3.79□□□□□ -1.8
LINC00649-204ENST00000593977 NR5A2O00482 541 aa3.79□□□□□ -1.8
LINC00649-204ENST00000593977 CHEK1O14757 476 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms