RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 APOL4Q9BPW4 351 aa12.24□□□□□ -0.45
VRK3-205ENST00000593919 CRB3Q9BUF7 120 aa12.24□□□□□ -0.45
VRK3-205ENST00000593919 DGCR6LQ9BY27 220 aa12.24□□□□□ -0.45
VRK3-205ENST00000593919 WDR54Q9H977 334 aa12.24□□□□□ -0.45
VRK3-205ENST00000593919 FBXO34Q9NWN3 711 aa12.24□□□□□ -0.45
VRK3-205ENST00000593919 PRODH2Q9UF12 536 aa12.24□□□□□ -0.45
VRK3-205ENST00000593919 LYVE1Q9Y5Y7 322 aa12.24□□□□□ -0.45
VRK3-205ENST00000593919 IGHV3-20A0A0C4DH32 117 aa12.23□□□□□ -0.45
VRK3-205ENST00000593919 A0A1B0GVG6 124 aa12.23□□□□□ -0.45
VRK3-205ENST00000593919 SPAARA0A1B0GVQ0 90 aa12.23□□□□□ -0.45
VRK3-205ENST00000593919 J3KTA2 159 aa12.23□□□□□ -0.45
VRK3-205ENST00000593919 ADAMDEC1O15204 470 aa12.23□□□□□ -0.45
VRK3-205ENST00000593919 DPM1O60762 260 aa12.23□□□□□ -0.45
VRK3-205ENST00000593919 KCNK2O95069 426 aa12.23□□□□□ -0.45
VRK3-205ENST00000593919 AK1P00568 194 aa12.23□□□□□ -0.45
VRK3-205ENST00000593919 FTH1P19P0C7X4 201 aa12.23□□□□□ -0.45
VRK3-205ENST00000593919 EMP2P54851 167 aa12.23□□□□□ -0.45
VRK3-205ENST00000593919 CDH12P55289 794 aa12.23□□□□□ -0.45
VRK3-205ENST00000593919 PUM1Q14671 1186 aaKnown RBP eCLIP12.23□□□□□ -0.45
VRK3-205ENST00000593919 C3orf38Q5JPI3 329 aa12.23□□□□□ -0.45
VRK3-205ENST00000593919 FAM69BQ5VUD6 431 aa12.23□□□□□ -0.45
VRK3-205ENST00000593919 COMTD1Q86VU5 262 aa12.23□□□□□ -0.45
VRK3-205ENST00000593919 GIPC3Q8TF64 312 aa12.23□□□□□ -0.45
VRK3-205ENST00000593919 PROX1Q92786 737 aa12.23□□□□□ -0.45
VRK3-205ENST00000593919 NODALQ96S42 347 aa12.23□□□□□ -0.45
VRK3-205ENST00000593919 ZPBPQ9BS86 351 aa12.23□□□□□ -0.45
VRK3-205ENST00000593919 SPATA5L1Q9BVQ7 753 aa12.23□□□□□ -0.45
VRK3-205ENST00000593919 DDA1Q9BW61 102 aa12.23□□□□□ -0.45
VRK3-205ENST00000593919 TIMMDC1Q9NPL8 285 aa12.23□□□□□ -0.45
VRK3-205ENST00000593919 GPN3Q9UHW5 284 aaPredicted RBP12.23□□□□□ -0.45
VRK3-205ENST00000593919 PTPRBP23467 1997 aa12.23□□□□□ -0.45
VRK3-205ENST00000593919 PROB1E7EW31 1015 aa12.23□□□□□ -0.45
VRK3-205ENST00000593919 STX11O75558 287 aa12.23□□□□□ -0.45
VRK3-205ENST00000593919 SEC14L2O76054 403 aa12.23□□□□□ -0.45
VRK3-205ENST00000593919 DKK1O94907 266 aa12.23□□□□□ -0.45
VRK3-205ENST00000593919 SOX30O94993 753 aa12.23□□□□□ -0.45
VRK3-205ENST00000593919 ALPPP05187 535 aa12.23□□□□□ -0.45
VRK3-205ENST00000593919 CCDC159P0C7I6 412 aa12.23□□□□□ -0.45
VRK3-205ENST00000593919 CDK4P11802 303 aa12.23□□□□□ -0.45
VRK3-205ENST00000593919 GSSP48637 474 aa12.23□□□□□ -0.45
VRK3-205ENST00000593919 RPS6KA3P51812 740 aa12.23□□□□□ -0.45
VRK3-205ENST00000593919 NUP107P57740 925 aa12.23□□□□□ -0.45
VRK3-205ENST00000593919 NPRL3Q12980 569 aa12.23□□□□□ -0.45
VRK3-205ENST00000593919 EIF3IQ13347 325 aaKnown RBP12.23□□□□□ -0.45
VRK3-205ENST00000593919 GPR68Q15743 365 aa12.23□□□□□ -0.45
VRK3-205ENST00000593919 ASCL5Q7RTU5 278 aa12.23□□□□□ -0.45
VRK3-205ENST00000593919 VRK2Q86Y07 508 aa12.23□□□□□ -0.45
VRK3-205ENST00000593919 METTL21AQ8WXB1 218 aa12.23□□□□□ -0.45
VRK3-205ENST00000593919 ZNF566Q969W8 418 aa12.23□□□□□ -0.45
VRK3-205ENST00000593919 ART5Q96L15 291 aa12.23□□□□□ -0.45
VRK3-205ENST00000593919 ZNF354BQ96LW1 612 aa12.23□□□□□ -0.45
VRK3-205ENST00000593919 SLC46A1Q96NT5 459 aa12.23□□□□□ -0.45
VRK3-205ENST00000593919 ZNF300Q96RE9 604 aaPredicted RBP12.23□□□□□ -0.45
VRK3-205ENST00000593919 ZNF347Q96SE7 839 aa12.23□□□□□ -0.45
VRK3-205ENST00000593919 DOK1Q99704 481 aa12.23□□□□□ -0.45
VRK3-205ENST00000593919 NUDT9Q9BW91 350 aa12.23□□□□□ -0.45
VRK3-205ENST00000593919 RASSF1Q9NS23 344 aa12.23□□□□□ -0.45
VRK3-205ENST00000593919 THSD1Q9NS62 852 aa12.23□□□□□ -0.45
VRK3-205ENST00000593919 NXT1Q9UKK6 140 aaKnown RBP12.23□□□□□ -0.45
VRK3-205ENST00000593919 NDRG4Q9ULP0 352 aaKnown RBP12.23□□□□□ -0.45
VRK3-205ENST00000593919 CENPVL1A0A0U1RR11 272 aa12.22□□□□□ -0.45
VRK3-205ENST00000593919 A0A1W2PPW3 197 aa12.22□□□□□ -0.45
VRK3-205ENST00000593919 C9orf172C9J069 976 aa12.22□□□□□ -0.45
VRK3-205ENST00000593919 C9J4A7 227 aa12.22□□□□□ -0.45
VRK3-205ENST00000593919 PRKNO60260 465 aaPredicted RBP12.22□□□□□ -0.45
VRK3-205ENST00000593919 BRINP1O60477 761 aa12.22□□□□□ -0.45
VRK3-205ENST00000593919 EPPINO95925 133 aa12.22□□□□□ -0.45
VRK3-205ENST00000593919 RFX3P48380 749 aa12.22□□□□□ -0.45
VRK3-205ENST00000593919 LIMK1P53667 647 aa12.22□□□□□ -0.45
VRK3-205ENST00000593919 RPP38P78345 283 aaKnown RBP12.22□□□□□ -0.45
VRK3-205ENST00000593919 KCNC4Q03721 635 aa12.22□□□□□ -0.45
VRK3-205ENST00000593919 NCF4Q15080 339 aa12.22□□□□□ -0.45
VRK3-205ENST00000593919 EXOC3L2Q2M3D2 409 aa12.22□□□□□ -0.45
VRK3-205ENST00000593919 ZNF311Q5JNZ3 666 aa12.22□□□□□ -0.45
VRK3-205ENST00000593919 ZAR1Q86SH2 424 aa12.22□□□□□ -0.45
VRK3-205ENST00000593919 ZNF619Q8N2I2 560 aa12.22□□□□□ -0.45
VRK3-205ENST00000593919 AMER2Q8N7J2 671 aa12.22□□□□□ -0.45
VRK3-205ENST00000593919 ZSCAN1Q8NBB4 408 aa12.22□□□□□ -0.45
VRK3-205ENST00000593919 OR10G2Q8NGC3 310 aa12.22□□□□□ -0.45
VRK3-205ENST00000593919 OR1N1Q8NGS0 311 aa12.22□□□□□ -0.45
VRK3-205ENST00000593919 FEVQ99581 238 aa12.22□□□□□ -0.45
VRK3-205ENST00000593919 WFDC6Q9BQY6 131 aa12.22□□□□□ -0.45
VRK3-205ENST00000593919 PINK1Q9BXM7 581 aa12.22□□□□□ -0.45
VRK3-205ENST00000593919 SAP130Q9H0E3 1048 aa12.22□□□□□ -0.45
VRK3-205ENST00000593919 MTHFD2LQ9H903 347 aaPredicted RBP12.22□□□□□ -0.45
VRK3-205ENST00000593919 Q9N2J8 555 aa12.22□□□□□ -0.45
VRK3-205ENST00000593919 ERVK-18Q9QC07 812 aa12.22□□□□□ -0.45
VRK3-205ENST00000593919 COPS7AQ9UBW8 275 aa12.22□□□□□ -0.45
VRK3-205ENST00000593919 WARS2Q9UGM6 360 aaKnown RBP12.22□□□□□ -0.45
VRK3-205ENST00000593919 ASPMQ8IZT6 3477 aa12.22□□□□□ -0.45
VRK3-205ENST00000593919 CELSR3Q9NYQ7 3312 aa12.22□□□□□ -0.45
VRK3-205ENST00000593919 NPIPA5A0A0B4J1W7 369 aa12.21□□□□□ -0.45
VRK3-205ENST00000593919 NPIPA7E9PJI5 369 aa12.21□□□□□ -0.45
VRK3-205ENST00000593919 KIAA0513O60268 411 aa12.21□□□□□ -0.45
VRK3-205ENST00000593919 FAM20BO75063 409 aa12.21□□□□□ -0.45
VRK3-205ENST00000593919 DLGAP3O95886 979 aa12.21□□□□□ -0.45
VRK3-205ENST00000593919 IFNW1P05000 195 aa12.21□□□□□ -0.45
VRK3-205ENST00000593919 NPIPA8P0DM63 369 aa12.21□□□□□ -0.45
VRK3-205ENST00000593919 ITGA2P17301 1181 aa12.21□□□□□ -0.45
VRK3-205ENST00000593919 TRHRP34981 398 aaPredicted RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms