RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 EEF1E1-BLOC1S5C9J1V9 151 aa13.81□□□□□ -0.2
TRIM28-203ENST00000593582 SCDO00767 359 aa13.81□□□□□ -0.2
TRIM28-203ENST00000593582 EEF1E1O43324 174 aaKnown RBP13.81□□□□□ -0.2
TRIM28-203ENST00000593582 GMFGO60234 142 aa13.81□□□□□ -0.2
TRIM28-203ENST00000593582 RCBTB2O95199 551 aa13.81□□□□□ -0.2
TRIM28-203ENST00000593582 AGFG1P52594 562 aaKnown RBP13.81□□□□□ -0.2
TRIM28-203ENST00000593582 EEFSECP57772 596 aaKnown RBP13.81□□□□□ -0.2
TRIM28-203ENST00000593582 BST1Q10588 318 aa13.81□□□□□ -0.2
TRIM28-203ENST00000593582 FBXL19-AS1Q494R0 122 aa13.81□□□□□ -0.2
TRIM28-203ENST00000593582 GLYR1Q49A26 553 aaPredicted RBP13.81□□□□□ -0.2
TRIM28-203ENST00000593582 CDC73Q6P1J9 531 aa13.81□□□□□ -0.2
TRIM28-203ENST00000593582 POMZP3Q6PJE2 187 aa13.81□□□□□ -0.2
TRIM28-203ENST00000593582 GRAMD2AQ8IUY3 354 aa13.81□□□□□ -0.2
TRIM28-203ENST00000593582 UBQLNLQ8IYU4 475 aa13.81□□□□□ -0.2
TRIM28-203ENST00000593582 MEIOBQ8N635 442 aa13.81□□□□□ -0.2
TRIM28-203ENST00000593582 SFXN5Q8TD22 340 aa13.81□□□□□ -0.2
TRIM28-203ENST00000593582 ADAMTS15Q8TE58 950 aa13.81□□□□□ -0.2
TRIM28-203ENST00000593582 RNASE6Q93091 150 aaKnown RBP13.81□□□□□ -0.2
TRIM28-203ENST00000593582 SH3GL2Q99962 352 aa13.81□□□□□ -0.2
TRIM28-203ENST00000593582 SFXN3Q9BWM7 321 aa13.81□□□□□ -0.2
TRIM28-203ENST00000593582 NUF2Q9BZD4 464 aa13.81□□□□□ -0.2
TRIM28-203ENST00000593582 PIGUQ9H490 435 aa13.81□□□□□ -0.2
TRIM28-203ENST00000593582 CLCF1Q9UBD9 225 aa13.81□□□□□ -0.2
TRIM28-203ENST00000593582 ARHGAP21Q5T5U3 1957 aa13.81□□□□□ -0.2
TRIM28-203ENST00000593582 OTOGQ6ZRI0 2925 aa13.8□□□□□ -0.2
TRIM28-203ENST00000593582 OR2M5A3KFT3 312 aa13.8□□□□□ -0.2
TRIM28-203ENST00000593582 ATP6V1C1P21283 382 aa13.8□□□□□ -0.2
TRIM28-203ENST00000593582 SOAT1P35610 550 aa13.8□□□□□ -0.2
TRIM28-203ENST00000593582 KIR2DL3P43628 341 aa13.8□□□□□ -0.2
TRIM28-203ENST00000593582 KRTAP10-9P60411 292 aa13.8□□□□□ -0.2
TRIM28-203ENST00000593582 HBA1P69905 142 aa13.8□□□□□ -0.2
TRIM28-203ENST00000593582 CCNJQ5T5M9 372 aa13.8□□□□□ -0.2
TRIM28-203ENST00000593582 P4HA3Q7Z4N8 544 aa13.8□□□□□ -0.2
TRIM28-203ENST00000593582 ZAR1Q86SH2 424 aa13.8□□□□□ -0.2
TRIM28-203ENST00000593582 MISPQ8IVT2 679 aa13.8□□□□□ -0.2
TRIM28-203ENST00000593582 LRRC34Q8IZ02 419 aa13.8□□□□□ -0.2
TRIM28-203ENST00000593582 OR8J2Q8NGG1 315 aa13.8□□□□□ -0.2
TRIM28-203ENST00000593582 OR5M1Q8NGP8 315 aa13.8□□□□□ -0.2
TRIM28-203ENST00000593582 MGARPQ8TDB4 240 aa13.8□□□□□ -0.2
TRIM28-203ENST00000593582 CDS1Q92903 461 aa13.8□□□□□ -0.2
TRIM28-203ENST00000593582 INTS12Q96CB8 462 aaKnown RBP13.8□□□□□ -0.2
TRIM28-203ENST00000593582 DPY30Q9C005 99 aa13.8□□□□□ -0.2
TRIM28-203ENST00000593582 MEAF6Q9HAF1 191 aa13.8□□□□□ -0.2
TRIM28-203ENST00000593582 PNPOQ9NVS9 261 aa13.8□□□□□ -0.2
TRIM28-203ENST00000593582 GPATCH2Q9NW75 528 aa13.8□□□□□ -0.2
TRIM28-203ENST00000593582 FBXO34Q9NWN3 711 aa13.8□□□□□ -0.2
TRIM28-203ENST00000593582 STOML1Q9UBI4 398 aa13.8□□□□□ -0.2
TRIM28-203ENST00000593582 PCDHGB4Q9UN71 923 aa13.8□□□□□ -0.2
TRIM28-203ENST00000593582 ZNF337Q9Y3M9 751 aa13.8□□□□□ -0.2
TRIM28-203ENST00000593582 MED12Q93074 2177 aa13.79□□□□□ -0.2
TRIM28-203ENST00000593582 A0A087WZY1 265 aa13.79□□□□□ -0.2
TRIM28-203ENST00000593582 H3BML4 177 aa13.79□□□□□ -0.2
TRIM28-203ENST00000593582 RNASET2O00584 256 aaKnown RBP13.79□□□□□ -0.2
TRIM28-203ENST00000593582 LBPP18428 481 aa13.79□□□□□ -0.2
TRIM28-203ENST00000593582 SLC18A1P54219 525 aa13.79□□□□□ -0.2
TRIM28-203ENST00000593582 MAGOHP61326 146 aaKnown RBP13.79□□□□□ -0.2
TRIM28-203ENST00000593582 EEF1A1P68104 462 aaKnown RBP13.79□□□□□ -0.2
TRIM28-203ENST00000593582 FOXF2Q12947 444 aa13.79□□□□□ -0.2
TRIM28-203ENST00000593582 BEND6Q5SZJ8 279 aaPredicted RBP13.79□□□□□ -0.2
TRIM28-203ENST00000593582 EEF1A1P5Q5VTE0 462 aa13.79□□□□□ -0.2
TRIM28-203ENST00000593582 OR4F3Q6IEY1 312 aa13.79□□□□□ -0.2
TRIM28-203ENST00000593582 PLXDC2Q6UX71 529 aa13.79□□□□□ -0.2
TRIM28-203ENST00000593582 TMEM200AQ86VY9 491 aa13.79□□□□□ -0.2
TRIM28-203ENST00000593582 KIF18BQ86Y91 864 aa13.79□□□□□ -0.2
TRIM28-203ENST00000593582 GCNT2Q8N0V5 402 aa13.79□□□□□ -0.2
TRIM28-203ENST00000593582 GATSQ8NAP1 163 aa13.79□□□□□ -0.2
TRIM28-203ENST00000593582 ZNF527Q8NB42 609 aa13.79□□□□□ -0.2
TRIM28-203ENST00000593582 VPS37AQ8NEZ2 397 aa13.79□□□□□ -0.2
TRIM28-203ENST00000593582 OR5AK3PQ8NH89 298 aa13.79□□□□□ -0.2
TRIM28-203ENST00000593582 HOXD1Q9GZZ0 328 aa13.79□□□□□ -0.2
TRIM28-203ENST00000593582 THAP1Q9NVV9 213 aa13.79□□□□□ -0.2
TRIM28-203ENST00000593582 NKIRAS1Q9NYS0 192 aa13.79□□□□□ -0.2
TRIM28-203ENST00000593582 VDAC3Q9Y277 283 aa13.79□□□□□ -0.2
TRIM28-203ENST00000593582 AP4B1Q9Y6B7 739 aa13.79□□□□□ -0.2
TRIM28-203ENST00000593582 A0A1W2PQD3 144 aa13.78□□□□□ -0.2
TRIM28-203ENST00000593582 SLC22A20A6NK97 555 aa13.78□□□□□ -0.2
TRIM28-203ENST00000593582 SEC14L5O43304 696 aa13.78□□□□□ -0.2
TRIM28-203ENST00000593582 HCRTR2O43614 444 aa13.78□□□□□ -0.2
TRIM28-203ENST00000593582 TGM6O95932 706 aa13.78□□□□□ -0.2
TRIM28-203ENST00000593582 ZNF17P17021 662 aa13.78□□□□□ -0.2
TRIM28-203ENST00000593582 ZNF41P51814 821 aaPredicted RBP13.78□□□□□ -0.2
TRIM28-203ENST00000593582 CLNS1AP54105 237 aaKnown RBP13.78□□□□□ -0.2
TRIM28-203ENST00000593582 WDR4P57081 412 aaKnown RBP13.78□□□□□ -0.2
TRIM28-203ENST00000593582 SNTB1Q13884 538 aaKnown RBP13.78□□□□□ -0.2
TRIM28-203ENST00000593582 DCST2Q5T1A1 773 aa13.78□□□□□ -0.2
TRIM28-203ENST00000593582 ANXA8L1Q5VT79 327 aa13.78□□□□□ -0.2
TRIM28-203ENST00000593582 ATG16L1Q676U5 607 aa13.78□□□□□ -0.2
TRIM28-203ENST00000593582 OR2A2Q6IF42 318 aa13.78□□□□□ -0.2
TRIM28-203ENST00000593582 ZZZ3Q8IYH5 903 aa13.78□□□□□ -0.2
TRIM28-203ENST00000593582 CLECL1Q8IZS7 167 aa13.78□□□□□ -0.2
TRIM28-203ENST00000593582 ACTRT2Q8TDY3 377 aa13.78□□□□□ -0.2
TRIM28-203ENST00000593582 TESCQ96BS2 214 aa13.78□□□□□ -0.2
TRIM28-203ENST00000593582 SH3YL1Q96HL8 342 aaPredicted RBP13.78□□□□□ -0.2
TRIM28-203ENST00000593582 CRIM1Q9NZV1 1036 aa13.78□□□□□ -0.2
TRIM28-203ENST00000593582 JKAMPQ9P055 326 aa13.78□□□□□ -0.2
TRIM28-203ENST00000593582 RNF103-CHMP3A0A140T963 221 aa13.77□□□□□ -0.21
TRIM28-203ENST00000593582 PRSS51A0A1B0GVH4 220 aa13.77□□□□□ -0.21
TRIM28-203ENST00000593582 DUXAA6NLW8 204 aa13.77□□□□□ -0.21
TRIM28-203ENST00000593582 H0YC42 278 aa13.77□□□□□ -0.21
TRIM28-203ENST00000593582 H3BNH8 94 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms