RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 JMJD1CQ15652 2540 aa21.45■■□□□ 1.02
LSM4-202ENST00000593564 TLN2Q9Y4G6 2542 aa21.45■■□□□ 1.02
LSM4-202ENST00000593564 C7orf72A4D263 438 aa21.44■■□□□ 1.02
LSM4-202ENST00000593564 SLC28A1O00337 649 aa21.44■■□□□ 1.02
LSM4-202ENST00000593564 NDUFB5O43674 189 aa21.44■■□□□ 1.02
LSM4-202ENST00000593564 TBX19O60806 448 aa21.44■■□□□ 1.02
LSM4-202ENST00000593564 LY6G6DO95868 133 aa21.44■■□□□ 1.02
LSM4-202ENST00000593564 PPP3CBP16298 524 aa21.44■■□□□ 1.02
LSM4-202ENST00000593564 IL11P20809 199 aa21.44■■□□□ 1.02
LSM4-202ENST00000593564 CCT5P48643 541 aa21.44■■□□□ 1.02
LSM4-202ENST00000593564 EXOC3L2Q2M3D2 409 aa21.44■■□□□ 1.02
LSM4-202ENST00000593564 ANKRD26P1Q6NSI1 321 aa21.44■■□□□ 1.02
LSM4-202ENST00000593564 WDR75Q8IWA0 830 aaKnown RBP21.44■■□□□ 1.02
LSM4-202ENST00000593564 OR4C3Q8NH37 302 aa21.44■■□□□ 1.02
LSM4-202ENST00000593564 OR10D3Q8NH80 312 aa21.44■■□□□ 1.02
LSM4-202ENST00000593564 ZFP28Q8NHY6 868 aa21.44■■□□□ 1.02
LSM4-202ENST00000593564 PPP1R14CQ8TAE6 165 aa21.44■■□□□ 1.02
LSM4-202ENST00000593564 ZBED6CLQ96FA7 236 aaPredicted RBP21.44■■□□□ 1.02
LSM4-202ENST00000593564 PERPQ96FX8 193 aa21.44■■□□□ 1.02
LSM4-202ENST00000593564 FCRL1Q96LA6 429 aa21.44■■□□□ 1.02
LSM4-202ENST00000593564 CCT7Q99832 543 aa21.44■■□□□ 1.02
LSM4-202ENST00000593564 BDH2Q9BUT1 245 aa21.44■■□□□ 1.02
LSM4-202ENST00000593564 LRTM1Q9HBL6 345 aa21.44■■□□□ 1.02
LSM4-202ENST00000593564 OXSMQ9NWU1 459 aa21.44■■□□□ 1.02
LSM4-202ENST00000593564 PTGDR2Q9Y5Y4 395 aa21.44■■□□□ 1.02
LSM4-202ENST00000593564 GIMAP1-GIMAP5A0A087WTJ2 511 aa21.43■■□□□ 1.02
LSM4-202ENST00000593564 RGS14O43566 566 aa21.43■■□□□ 1.02
LSM4-202ENST00000593564 SS18L1O75177 396 aaPredicted RBP21.43■■□□□ 1.02
LSM4-202ENST00000593564 PLGP00747 810 aaPredicted RBP21.43■■□□□ 1.02
LSM4-202ENST00000593564 THBDP07204 575 aa21.43■■□□□ 1.02
LSM4-202ENST00000593564 CRHR1P34998 444 aa21.43■■□□□ 1.02
LSM4-202ENST00000593564 FRKP42685 505 aaPredicted RBP21.43■■□□□ 1.02
LSM4-202ENST00000593564 CTBP2P56545 445 aa21.43■■□□□ 1.02
LSM4-202ENST00000593564 CTU2Q2VPK5 515 aaKnown RBP21.43■■□□□ 1.02
LSM4-202ENST00000593564 ZNF385BQ569K4 471 aa21.43■■□□□ 1.02
LSM4-202ENST00000593564 CLEC6AQ6EIG7 209 aa21.43■■□□□ 1.02
LSM4-202ENST00000593564 PPP4R4Q6NUP7 873 aa21.43■■□□□ 1.02
LSM4-202ENST00000593564 CEP112Q8N8E3 955 aa21.43■■□□□ 1.02
LSM4-202ENST00000593564 FAM110BQ8TC76 370 aa21.43■■□□□ 1.02
LSM4-202ENST00000593564 ACTRT2Q8TDY3 377 aa21.43■■□□□ 1.02
LSM4-202ENST00000593564 SLC9A6Q92581 669 aa21.43■■□□□ 1.02
LSM4-202ENST00000593564 ZBTB8AQ96BR9 441 aa21.43■■□□□ 1.02
LSM4-202ENST00000593564 PPCDCQ96CD2 204 aa21.43■■□□□ 1.02
LSM4-202ENST00000593564 GIMAP5Q96F15 307 aa21.43■■□□□ 1.02
LSM4-202ENST00000593564 MS4A4EQ96PG1 132 aa21.43■■□□□ 1.02
LSM4-202ENST00000593564 GSX2Q9BZM3 304 aa21.43■■□□□ 1.02
LSM4-202ENST00000593564 REEP4Q9H6H4 257 aa21.43■■□□□ 1.02
LSM4-202ENST00000593564 MCTS1Q9ULC4 181 aaKnown RBP21.43■■□□□ 1.02
LSM4-202ENST00000593564 RAI1Q7Z5J4 1906 aaPredicted RBP21.43■■□□□ 1.02
LSM4-202ENST00000593564 UQCRHLA0A096LP55 91 aa21.42■■□□□ 1.02
LSM4-202ENST00000593564 A0A1W2PRB8 838 aa21.42■■□□□ 1.02
LSM4-202ENST00000593564 ADAMDEC1O15204 470 aa21.42■■□□□ 1.02
LSM4-202ENST00000593564 DSCAMO60469 2012 aa21.42■■□□□ 1.02
LSM4-202ENST00000593564 ACP2P11117 423 aa21.42■■□□□ 1.02
LSM4-202ENST00000593564 CPA3P15088 417 aa21.42■■□□□ 1.02
LSM4-202ENST00000593564 SDC1P18827 310 aa21.42■■□□□ 1.02
LSM4-202ENST00000593564 PSMA4P25789 261 aaKnown RBP21.42■■□□□ 1.02
LSM4-202ENST00000593564 PRKAG1P54619 331 aa21.42■■□□□ 1.02
LSM4-202ENST00000593564 RAC1P63000 192 aa21.42■■□□□ 1.02
LSM4-202ENST00000593564 BEX5Q5H9J7 111 aa21.42■■□□□ 1.02
LSM4-202ENST00000593564 STAC2Q6ZMT1 411 aa21.42■■□□□ 1.02
LSM4-202ENST00000593564 RNF165Q6ZSG1 346 aa21.42■■□□□ 1.02
LSM4-202ENST00000593564 GALNT10Q86SR1 603 aa21.42■■□□□ 1.02
LSM4-202ENST00000593564 NUP43Q8NFH3 380 aa21.42■■□□□ 1.02
LSM4-202ENST00000593564 OR6Y1Q8NGX8 325 aa21.42■■□□□ 1.02
LSM4-202ENST00000593564 GLRX2Q9NS18 164 aa21.42■■□□□ 1.02
LSM4-202ENST00000593564 ACSS1Q9NUB1 689 aaPredicted RBP21.42■■□□□ 1.02
LSM4-202ENST00000593564 MED17Q9NVC6 651 aa21.42■■□□□ 1.02
LSM4-202ENST00000593564 CLEC4AQ9UMR7 237 aa21.42■■□□□ 1.02
LSM4-202ENST00000593564 ZANQ9Y493 2812 aa21.42■■□□□ 1.02
LSM4-202ENST00000593564 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP21.41■■□□□ 1.02
LSM4-202ENST00000593564 KLF4O43474 513 aa21.41■■□□□ 1.02
LSM4-202ENST00000593564 AKAP10O43572 662 aa21.41■■□□□ 1.02
LSM4-202ENST00000593564 KCNK2O95069 426 aa21.41■■□□□ 1.02
LSM4-202ENST00000593564 NEFHP12036 1026 aa21.41■■□□□ 1.02
LSM4-202ENST00000593564 LCN1P31025 176 aa21.41■■□□□ 1.02
LSM4-202ENST00000593564 MANFP55145 182 aaKnown RBP21.41■■□□□ 1.02
LSM4-202ENST00000593564 SLC18A2Q05940 514 aa21.41■■□□□ 1.02
LSM4-202ENST00000593564 PDE7AQ13946 482 aa21.41■■□□□ 1.02
LSM4-202ENST00000593564 PLPPR5Q32ZL2 321 aa21.41■■□□□ 1.02
LSM4-202ENST00000593564 CPTPQ5TA50 214 aa21.41■■□□□ 1.02
LSM4-202ENST00000593564 LIPMQ5VYY2 423 aa21.41■■□□□ 1.02
LSM4-202ENST00000593564 MFSD12Q6NUT3 480 aa21.41■■□□□ 1.02
LSM4-202ENST00000593564 Q6ZSR9 355 aa21.41■■□□□ 1.02
LSM4-202ENST00000593564 ESPNLQ6ZVH7 1005 aa21.41■■□□□ 1.02
LSM4-202ENST00000593564 PLEKHM3Q6ZWE6 761 aa21.41■■□□□ 1.02
LSM4-202ENST00000593564 ZAR1Q86SH2 424 aa21.41■■□□□ 1.02
LSM4-202ENST00000593564 MISPQ8IVT2 679 aa21.41■■□□□ 1.02
LSM4-202ENST00000593564 GATSQ8NAP1 163 aa21.41■■□□□ 1.02
LSM4-202ENST00000593564 SLC16A11Q8NCK7 471 aa21.41■■□□□ 1.02
LSM4-202ENST00000593564 IGFBPL1Q8WX77 278 aa21.41■■□□□ 1.02
LSM4-202ENST00000593564 TSSK3Q96PN8 268 aa21.41■■□□□ 1.02
LSM4-202ENST00000593564 NPAS1Q99742 590 aa21.41■■□□□ 1.02
LSM4-202ENST00000593564 FANCFQ9NPI8 374 aa21.41■■□□□ 1.02
LSM4-202ENST00000593564 UBQLN4Q9NRR5 601 aa21.41■■□□□ 1.02
LSM4-202ENST00000593564 SH3BP4Q9P0V3 963 aa21.41■■□□□ 1.02
LSM4-202ENST00000593564 CSPG4Q6UVK1 2322 aa21.41■■□□□ 1.02
LSM4-202ENST00000593564 AZIN1O14977 448 aa21.4■■□□□ 1.02
LSM4-202ENST00000593564 CXCL13O43927 109 aa21.4■■□□□ 1.02
LSM4-202ENST00000593564 SYNGR4O95473 234 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms