RNA–Protein interactions for RNA: ENST00000592546.5

RFX2-222, Transcript of regulatory factor X2, human

APPRIS ALT1 TSL 2 BASIC

Gene RFX2, Length 2,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-222	ENST00000592546	CTPS2	Q9NRF8	586 aa		13.51	□□□□□ -0.25
RFX2-222	ENST00000592546	TDP1	Q9NUW8	608 aa		13.51	□□□□□ -0.25
RFX2-222	ENST00000592546	NLGN3	Q9NZ94	848 aa		13.51	□□□□□ -0.25
RFX2-222	ENST00000592546	ACSL5	Q9ULC5	683 aa		13.51	□□□□□ -0.25
RFX2-222	ENST00000592546	WNT6	Q9Y6F9	365 aa		13.51	□□□□□ -0.25
RFX2-222	ENST00000592546	CARNS1	A5YM72	827 aa		13.5	□□□□□ -0.25
RFX2-222	ENST00000592546	EPPIN	O95925	133 aa		13.5	□□□□□ -0.25
RFX2-222	ENST00000592546	MMP15	P51511	669 aa		13.5	□□□□□ -0.25
RFX2-222	ENST00000592546	MANF	P55145	182 aa	Known RBP	13.5	□□□□□ -0.25
RFX2-222	ENST00000592546	ERVFC1	P60507	584 aa		13.5	□□□□□ -0.25
RFX2-222	ENST00000592546	TBPL1	P62380	186 aa		13.5	□□□□□ -0.25
RFX2-222	ENST00000592546	DGCR2	P98153	550 aa		13.5	□□□□□ -0.25
RFX2-222	ENST00000592546	BDH1	Q02338	343 aa		13.5	□□□□□ -0.25
RFX2-222	ENST00000592546	GRIN2C	Q14957	1233 aa		13.5	□□□□□ -0.25
RFX2-222	ENST00000592546	SYTL3	Q4VX76	610 aa		13.5	□□□□□ -0.25
RFX2-222	ENST00000592546	TCTE1	Q5JU00	501 aa		13.5	□□□□□ -0.25
RFX2-222	ENST00000592546	TMEM159	Q96B96	161 aa		13.5	□□□□□ -0.25
RFX2-222	ENST00000592546	DPYSL5	Q9BPU6	564 aa		13.5	□□□□□ -0.25
RFX2-222	ENST00000592546	EFCAB11	Q9BUY7	163 aa		13.5	□□□□□ -0.25
RFX2-222	ENST00000592546	TMEM106C	Q9BVX2	250 aa		13.5	□□□□□ -0.25
RFX2-222	ENST00000592546	ACTR6	Q9GZN1	396 aa		13.5	□□□□□ -0.25
RFX2-222	ENST00000592546	SPRTN	Q9H040	489 aa	Predicted RBP	13.5	□□□□□ -0.25
RFX2-222	ENST00000592546	BRD7	Q9NPI1	651 aa		13.5	□□□□□ -0.25
RFX2-222	ENST00000592546	SIRT3	Q9NTG7	399 aa	Predicted RBP	13.5	□□□□□ -0.25
RFX2-222	ENST00000592546	SLC9A8	Q9Y2E8	581 aa		13.5	□□□□□ -0.25
RFX2-222	ENST00000592546	HRH3	Q9Y5N1	445 aa		13.5	□□□□□ -0.25
RFX2-222	ENST00000592546		A0A0G2JK05	382 aa		13.5	□□□□□ -0.25
RFX2-222	ENST00000592546	PI15	O43692	258 aa		13.5	□□□□□ -0.25
RFX2-222	ENST00000592546	RGS11	O94810	467 aa		13.5	□□□□□ -0.25
RFX2-222	ENST00000592546	WDPCP	O95876	746 aa		13.5	□□□□□ -0.25
RFX2-222	ENST00000592546	CH25H	O95992	272 aa		13.5	□□□□□ -0.25
RFX2-222	ENST00000592546	NMB	P08949	121 aa		13.5	□□□□□ -0.25
RFX2-222	ENST00000592546	ANKRD34C	P0C6C1	535 aa		13.5	□□□□□ -0.25
RFX2-222	ENST00000592546	C1GALT1C1L	P0DN25	315 aa		13.5	□□□□□ -0.25
RFX2-222	ENST00000592546	NPPB	P16860	134 aa		13.5	□□□□□ -0.25
RFX2-222	ENST00000592546	SYN1	P17600	705 aa		13.5	□□□□□ -0.25
RFX2-222	ENST00000592546	C4BPB	P20851	252 aa		13.5	□□□□□ -0.25
RFX2-222	ENST00000592546	METAP1	P53582	386 aa		13.5	□□□□□ -0.25
RFX2-222	ENST00000592546	NTHL1	P78549	312 aa		13.5	□□□□□ -0.25
RFX2-222	ENST00000592546	CNTN1	Q12860	1018 aa		13.5	□□□□□ -0.25
RFX2-222	ENST00000592546	TMEM115	Q12893	351 aa	Predicted RBP	13.5	□□□□□ -0.25
RFX2-222	ENST00000592546	STK11	Q15831	433 aa		13.5	□□□□□ -0.25
RFX2-222	ENST00000592546	TMEM44	Q2T9K0	475 aa		13.5	□□□□□ -0.25
RFX2-222	ENST00000592546	RNASE12	Q5GAN4	147 aa	Known RBP	13.5	□□□□□ -0.25
RFX2-222	ENST00000592546	FAM27D1	Q5T7N8	215 aa		13.5	□□□□□ -0.25
RFX2-222	ENST00000592546	ASPG	Q86U10	573 aa		13.5	□□□□□ -0.25
RFX2-222	ENST00000592546	TRAM1L1	Q8N609	369 aa		13.5	□□□□□ -0.25
RFX2-222	ENST00000592546	ZNF480	Q8WV37	535 aa		13.5	□□□□□ -0.25
RFX2-222	ENST00000592546	CXorf58	Q96LI9	332 aa		13.5	□□□□□ -0.25
RFX2-222	ENST00000592546	C7orf50	Q9BRJ6	194 aa	Known RBP	13.5	□□□□□ -0.25
RFX2-222	ENST00000592546	JAM3	Q9BX67	310 aa		13.5	□□□□□ -0.25
RFX2-222	ENST00000592546	BEX1	Q9HBH7	125 aa		13.5	□□□□□ -0.25
RFX2-222	ENST00000592546	OR6C2	Q9NZP2	312 aa		13.5	□□□□□ -0.25
RFX2-222	ENST00000592546	EMC3	Q9P0I2	261 aa		13.5	□□□□□ -0.25
RFX2-222	ENST00000592546	SLC9B1P1	A6NJY1	282 aa		13.49	□□□□□ -0.25
RFX2-222	ENST00000592546	SURF4	O15260	269 aa		13.49	□□□□□ -0.25
RFX2-222	ENST00000592546	LINC00271	P0C7V0	271 aa		13.49	□□□□□ -0.25
RFX2-222	ENST00000592546	PPM1A	P35813	382 aa		13.49	□□□□□ -0.25
RFX2-222	ENST00000592546	B2M	P61769	119 aa		13.49	□□□□□ -0.25
RFX2-222	ENST00000592546	MEF2A	Q02078	507 aa	Predicted RBP	13.49	□□□□□ -0.25
RFX2-222	ENST00000592546	DHODH	Q02127	395 aa		13.49	□□□□□ -0.25
RFX2-222	ENST00000592546	TSPAN31	Q12999	210 aa		13.49	□□□□□ -0.25
RFX2-222	ENST00000592546	TSTA3	Q13630	321 aa	Predicted RBP	13.49	□□□□□ -0.25
RFX2-222	ENST00000592546	TMEM220	Q6QAJ8	160 aa		13.49	□□□□□ -0.25
RFX2-222	ENST00000592546	RASSF6	Q6ZTQ3	369 aa		13.49	□□□□□ -0.25
RFX2-222	ENST00000592546	BBS1	Q8NFJ9	593 aa		13.49	□□□□□ -0.25
RFX2-222	ENST00000592546	GNPDA2	Q8TDQ7	276 aa		13.49	□□□□□ -0.25
RFX2-222	ENST00000592546	SMPDL3A	Q92484	453 aa		13.49	□□□□□ -0.25
RFX2-222	ENST00000592546	GLYATL1	Q969I3	302 aa		13.49	□□□□□ -0.25
RFX2-222	ENST00000592546	NEUROD4	Q9HD90	331 aa		13.49	□□□□□ -0.25
RFX2-222	ENST00000592546	CD93	Q9NPY3	652 aa		13.49	□□□□□ -0.25
RFX2-222	ENST00000592546	ZNF275	Q9NSD4	429 aa	Predicted RBP	13.49	□□□□□ -0.25
RFX2-222	ENST00000592546	CNIH4	Q9P003	139 aa		13.49	□□□□□ -0.25
RFX2-222	ENST00000592546	SPATA2	Q9UM82	520 aa		13.49	□□□□□ -0.25
RFX2-222	ENST00000592546	SLC5A10	A0PJK1	596 aa		13.49	□□□□□ -0.25
RFX2-222	ENST00000592546	NUPL2	O15504	423 aa	Known RBP	13.49	□□□□□ -0.25
RFX2-222	ENST00000592546	PEX14	O75381	377 aa		13.49	□□□□□ -0.25
RFX2-222	ENST00000592546	UBL3	O95164	117 aa		13.49	□□□□□ -0.25
RFX2-222	ENST00000592546	MT-ND4	P03905	459 aa		13.49	□□□□□ -0.25
RFX2-222	ENST00000592546	ADH1A	P07327	375 aa		13.49	□□□□□ -0.25
RFX2-222	ENST00000592546	CXCL2	P19875	107 aa		13.49	□□□□□ -0.25
RFX2-222	ENST00000592546	DRD5	P21918	477 aa		13.49	□□□□□ -0.25
RFX2-222	ENST00000592546	HTR1F	P30939	366 aa		13.49	□□□□□ -0.25
RFX2-222	ENST00000592546	TRIM23	P36406	574 aa		13.49	□□□□□ -0.25
RFX2-222	ENST00000592546	ZSWIM7	Q19AV6	140 aa		13.49	□□□□□ -0.25
RFX2-222	ENST00000592546	SLC30A6	Q6NXT4	461 aa		13.49	□□□□□ -0.25
RFX2-222	ENST00000592546	LRFN4	Q6PJG9	635 aa		13.49	□□□□□ -0.25
RFX2-222	ENST00000592546	FAM198B	Q6UWH4	519 aa		13.49	□□□□□ -0.25
RFX2-222	ENST00000592546	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	13.49	□□□□□ -0.25
RFX2-222	ENST00000592546	OR4Q3	Q8NH05	313 aa		13.49	□□□□□ -0.25
RFX2-222	ENST00000592546	HAVCR2	Q8TDQ0	301 aa		13.49	□□□□□ -0.25
RFX2-222	ENST00000592546	FAIM2	Q9BWQ8	316 aa		13.49	□□□□□ -0.25
RFX2-222	ENST00000592546	DDX31	Q9H8H2	851 aa	Known RBP	13.49	□□□□□ -0.25
RFX2-222	ENST00000592546		J3QRE1	110 aa		13.48	□□□□□ -0.25
RFX2-222	ENST00000592546	WNT1	P04628	370 aa		13.48	□□□□□ -0.25
RFX2-222	ENST00000592546	ATP6V1E1	P36543	226 aa		13.48	□□□□□ -0.25
RFX2-222	ENST00000592546	MLLT1	Q03111	559 aa	Predicted RBP	13.48	□□□□□ -0.25
RFX2-222	ENST00000592546	HSPB3	Q12988	150 aa		13.48	□□□□□ -0.25
RFX2-222	ENST00000592546	SLC22A10	Q63ZE4	541 aa		13.48	□□□□□ -0.25
RFX2-222	ENST00000592546	SIRT6	Q8N6T7	355 aa		13.48	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms