RNA–Protein interactions for RNA: ENST00000592234.5

CIRBP-237, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-237ENST00000592234 RNF122Q9H9V4 155 aa16.52■□□□□ 0.24
CIRBP-237ENST00000592234 BEX4Q9NWD9 120 aaPredicted RBP16.52■□□□□ 0.24
CIRBP-237ENST00000592234 KLHL28Q9NXS3 571 aa16.52■□□□□ 0.24
CIRBP-237ENST00000592234 ZNF226Q9NYT6 803 aa16.52■□□□□ 0.24
CIRBP-237ENST00000592234 C6orf203Q9P0P8 240 aaPredicted RBP16.52■□□□□ 0.24
CIRBP-237ENST00000592234 ZNF175Q9Y473 711 aa16.52■□□□□ 0.24
CIRBP-237ENST00000592234 AP4B1Q9Y6B7 739 aa16.52■□□□□ 0.24
CIRBP-237ENST00000592234 NAV3Q8IVL0 2385 aa16.52■□□□□ 0.23
CIRBP-237ENST00000592234 NIPBLQ6KC79 2804 aaeCLIP16.51■□□□□ 0.232e-6■■■■□ 25.1
CIRBP-237ENST00000592234 NPIPB8E9PQR5 432 aa16.51■□□□□ 0.23
CIRBP-237ENST00000592234 LSM1O15116 133 aaKnown RBP16.51■□□□□ 0.23
CIRBP-237ENST00000592234 EMC8O43402 210 aa16.51■□□□□ 0.23
CIRBP-237ENST00000592234 LYPLA1O75608 230 aaPredicted RBP16.51■□□□□ 0.23
CIRBP-237ENST00000592234 IGKV1D-16P01601 117 aa16.51■□□□□ 0.23
CIRBP-237ENST00000592234 ETV4P43268 484 aa16.51■□□□□ 0.23
CIRBP-237ENST00000592234 PCYT1AP49585 367 aa16.51■□□□□ 0.23
CIRBP-237ENST00000592234 MANFP55145 182 aaKnown RBP16.51■□□□□ 0.23
CIRBP-237ENST00000592234 FGFBP1Q14512 234 aa16.51■□□□□ 0.23
CIRBP-237ENST00000592234 SGCBQ16585 318 aa16.51■□□□□ 0.23
CIRBP-237ENST00000592234 UGT3A2Q3SY77 523 aa16.51■□□□□ 0.23
CIRBP-237ENST00000592234 APOOLQ6UXV4 268 aa16.51■□□□□ 0.23
CIRBP-237ENST00000592234 EXOC3L1Q86VI1 746 aa16.51■□□□□ 0.23
CIRBP-237ENST00000592234 NUDCD3Q8IVD9 361 aa16.51■□□□□ 0.23
CIRBP-237ENST00000592234 METTL25Q8N6Q8 603 aa16.51■□□□□ 0.23
CIRBP-237ENST00000592234 NUP43Q8NFH3 380 aa16.51■□□□□ 0.23
CIRBP-237ENST00000592234 CEP70Q8NHQ1 597 aa16.51■□□□□ 0.23
CIRBP-237ENST00000592234 SLC9A6Q92581 669 aa16.51■□□□□ 0.23
CIRBP-237ENST00000592234 PPCDCQ96CD2 204 aa16.51■□□□□ 0.23
CIRBP-237ENST00000592234 ZBED6CLQ96FA7 236 aaPredicted RBP16.51■□□□□ 0.23
CIRBP-237ENST00000592234 ZNF764Q96H86 408 aaPredicted RBP16.51■□□□□ 0.23
CIRBP-237ENST00000592234 CCT7Q99832 543 aa16.51■□□□□ 0.23
CIRBP-237ENST00000592234 SLC39A3Q9BRY0 314 aa16.51■□□□□ 0.23
CIRBP-237ENST00000592234 MED18Q9BUE0 208 aa16.51■□□□□ 0.23
CIRBP-237ENST00000592234 REEP4Q9H6H4 257 aa16.51■□□□□ 0.23
CIRBP-237ENST00000592234 ELOVL5Q9NYP7 299 aa16.51■□□□□ 0.23
CIRBP-237ENST00000592234 SH3BP4Q9P0V3 963 aa16.51■□□□□ 0.23
CIRBP-237ENST00000592234 STOML1Q9UBI4 398 aa16.51■□□□□ 0.23
CIRBP-237ENST00000592234 ZDHHC2Q9UIJ5 367 aa16.51■□□□□ 0.23
CIRBP-237ENST00000592234 VDAC3Q9Y277 283 aa16.51■□□□□ 0.23
CIRBP-237ENST00000592234 DSCAMO60469 2012 aa16.5■□□□□ 0.23
CIRBP-237ENST00000592234 IGLV3-32A0A0A0MS00 114 aa16.5■□□□□ 0.23
CIRBP-237ENST00000592234 SHISA8B8ZZ34 492 aa16.5■□□□□ 0.23
CIRBP-237ENST00000592234 PEX11AO75192 247 aa16.5■□□□□ 0.23
CIRBP-237ENST00000592234 NKX2-2O95096 273 aa16.5■□□□□ 0.23
CIRBP-237ENST00000592234 FGF4P08620 206 aa16.5■□□□□ 0.23
CIRBP-237ENST00000592234 HOXC12P31275 282 aa16.5■□□□□ 0.23
CIRBP-237ENST00000592234 SERPINB4P48594 390 aa16.5■□□□□ 0.23
CIRBP-237ENST00000592234 ZNF385BQ569K4 471 aa16.5■□□□□ 0.23
CIRBP-237ENST00000592234 PPP4R4Q6NUP7 873 aa16.5■□□□□ 0.23
CIRBP-237ENST00000592234 GALNT10Q86SR1 603 aa16.5■□□□□ 0.23
CIRBP-237ENST00000592234 CDRT4Q8N9R6 151 aa16.5■□□□□ 0.23
CIRBP-237ENST00000592234 ZNF395Q9H8N7 513 aaPredicted RBP16.5■□□□□ 0.23
CIRBP-237ENST00000592234 KCNK9Q9NPC2 374 aa16.5■□□□□ 0.23
CIRBP-237ENST00000592234 PROCRQ9UNN8 238 aa16.5■□□□□ 0.23
CIRBP-237ENST00000592234 ARID1AO14497 2285 aa16.5■□□□□ 0.23
CIRBP-237ENST00000592234 NUP214P35658 2090 aaPredicted RBP16.5■□□□□ 0.23
CIRBP-237ENST00000592234 UQCRHLA0A096LP55 91 aa16.49■□□□□ 0.23
CIRBP-237ENST00000592234 EIF1AYO14602 144 aaKnown RBP16.49■□□□□ 0.23
CIRBP-237ENST00000592234 NDUFB5O43674 189 aa16.49■□□□□ 0.23
CIRBP-237ENST00000592234 ITM2AO43736 263 aa16.49■□□□□ 0.23
CIRBP-237ENST00000592234 TBX19O60806 448 aa16.49■□□□□ 0.23
CIRBP-237ENST00000592234 OXSR1O95747 527 aaPredicted RBP16.49■□□□□ 0.23
CIRBP-237ENST00000592234 CGAP01215 116 aa16.49■□□□□ 0.23
CIRBP-237ENST00000592234 CD8BP10966 210 aa16.49■□□□□ 0.23
CIRBP-237ENST00000592234 FCGR2AP12318 317 aa16.49■□□□□ 0.23
CIRBP-237ENST00000592234 EFNA1P20827 205 aaPredicted RBP16.49■□□□□ 0.23
CIRBP-237ENST00000592234 UGT2B10P36537 528 aa16.49■□□□□ 0.23
CIRBP-237ENST00000592234 MAP3K8P41279 467 aa16.49■□□□□ 0.23
CIRBP-237ENST00000592234 NKX6-1P78426 367 aaPredicted RBP16.49■□□□□ 0.23
CIRBP-237ENST00000592234 OCRLQ01968 901 aa16.49■□□□□ 0.23
CIRBP-237ENST00000592234 CHI3L2Q15782 390 aa16.49■□□□□ 0.23
CIRBP-237ENST00000592234 RNF165Q6ZSG1 346 aa16.49■□□□□ 0.23
CIRBP-237ENST00000592234 ZNF610Q8N9Z0 462 aa16.49■□□□□ 0.23
CIRBP-237ENST00000592234 FBXO30Q8TB52 745 aa16.49■□□□□ 0.23
CIRBP-237ENST00000592234 HOXB13Q92826 284 aaPredicted RBP16.49■□□□□ 0.23
CIRBP-237ENST00000592234 PIK3IP1Q96FE7 263 aa16.49■□□□□ 0.23
CIRBP-237ENST00000592234 FCRL1Q96LA6 429 aa16.49■□□□□ 0.23
CIRBP-237ENST00000592234 C3orf30Q96M34 536 aa16.49■□□□□ 0.23
CIRBP-237ENST00000592234 MS4A4EQ96PG1 132 aa16.49■□□□□ 0.23
CIRBP-237ENST00000592234 C1orf50Q9BV19 199 aa16.49■□□□□ 0.23
CIRBP-237ENST00000592234 PRRG4Q9BZD6 226 aa16.49■□□□□ 0.23
CIRBP-237ENST00000592234 HHATLQ9HCP6 504 aa16.49■□□□□ 0.23
CIRBP-237ENST00000592234 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.48■□□□□ 0.23
CIRBP-237ENST00000592234 ALG1L2C9J202 215 aa16.48■□□□□ 0.23
CIRBP-237ENST00000592234 C16orf97H3BN30 126 aa16.48■□□□□ 0.23
CIRBP-237ENST00000592234 SIAH2O43255 324 aa16.48■□□□□ 0.23
CIRBP-237ENST00000592234 AQP8O94778 261 aa16.48■□□□□ 0.23
CIRBP-237ENST00000592234 HSPA4LO95757 839 aa16.48■□□□□ 0.23
CIRBP-237ENST00000592234 ACP2P11117 423 aa16.48■□□□□ 0.23
CIRBP-237ENST00000592234 BCKDHAP12694 445 aa16.48■□□□□ 0.23
CIRBP-237ENST00000592234 ZNF17P17021 662 aa16.48■□□□□ 0.23
CIRBP-237ENST00000592234 HOXB4P17483 251 aaPredicted RBP16.48■□□□□ 0.23
CIRBP-237ENST00000592234 CRYGSP22914 178 aa16.48■□□□□ 0.23
CIRBP-237ENST00000592234 CCKARP32238 428 aa16.48■□□□□ 0.23
CIRBP-237ENST00000592234 FRKP42685 505 aaPredicted RBP16.48■□□□□ 0.23
CIRBP-237ENST00000592234 EIF1AXP47813 144 aaKnown RBP16.48■□□□□ 0.23
CIRBP-237ENST00000592234 TMEM44Q2T9K0 475 aa16.48■□□□□ 0.23
CIRBP-237ENST00000592234 SHEQ5VZ18 495 aa16.48■□□□□ 0.23
CIRBP-237ENST00000592234 FIGNL1Q6PIW4 674 aa16.48■□□□□ 0.23
CIRBP-237ENST00000592234 FAM214BQ7L5A3 538 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms