RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 A0A1W2PPM1 405 aa9.12□□□□□ -0.95
VMP1-214ENST00000592106 TMEM114B3SHH9 223 aa9.12□□□□□ -0.95
VMP1-214ENST00000592106 ALG1L2C9J202 215 aa9.12□□□□□ -0.95
VMP1-214ENST00000592106 NPIPB8E9PQR5 432 aa9.12□□□□□ -0.95
VMP1-214ENST00000592106 SCDO00767 359 aa9.12□□□□□ -0.95
VMP1-214ENST00000592106 EIF1AYO14602 144 aaKnown RBP9.12□□□□□ -0.95
VMP1-214ENST00000592106 AZIN1O14977 448 aa9.12□□□□□ -0.95
VMP1-214ENST00000592106 TBX19O60806 448 aa9.12□□□□□ -0.95
VMP1-214ENST00000592106 NKX2-2O95096 273 aa9.12□□□□□ -0.95
VMP1-214ENST00000592106 OXSR1O95747 527 aaPredicted RBP9.12□□□□□ -0.95
VMP1-214ENST00000592106 NGFRP08138 427 aa9.12□□□□□ -0.95
VMP1-214ENST00000592106 INHBBP09529 407 aa9.12□□□□□ -0.95
VMP1-214ENST00000592106 MAPK1P28482 360 aa9.12□□□□□ -0.95
VMP1-214ENST00000592106 HOXC12P31275 282 aa9.12□□□□□ -0.95
VMP1-214ENST00000592106 UGT2B10P36537 528 aa9.12□□□□□ -0.95
VMP1-214ENST00000592106 HPCAL1P37235 193 aa9.12□□□□□ -0.95
VMP1-214ENST00000592106 EIF1AXP47813 144 aaKnown RBP9.12□□□□□ -0.95
VMP1-214ENST00000592106 RPL38P63173 70 aaKnown RBP9.12□□□□□ -0.95
VMP1-214ENST00000592106 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.12□□□□□ -0.95
VMP1-214ENST00000592106 GRAMD1BQ3KR37 738 aa9.12□□□□□ -0.95
VMP1-214ENST00000592106 Q5PR19 223 aa9.12□□□□□ -0.95
VMP1-214ENST00000592106 CLEC6AQ6EIG7 209 aa9.12□□□□□ -0.95
VMP1-214ENST00000592106 GTF2IRD2BQ6EKJ0 949 aa9.12□□□□□ -0.95
VMP1-214ENST00000592106 ZCCHC12Q6PEW1 402 aa9.12□□□□□ -0.95
VMP1-214ENST00000592106 LRIG3Q6UXM1 1119 aa9.12□□□□□ -0.95
VMP1-214ENST00000592106 RNF165Q6ZSG1 346 aa9.12□□□□□ -0.95
VMP1-214ENST00000592106 FAM214BQ7L5A3 538 aa9.12□□□□□ -0.95
VMP1-214ENST00000592106 ZNF551Q7Z340 670 aaPredicted RBP9.12□□□□□ -0.95
VMP1-214ENST00000592106 GTF2IRD2Q86UP8 949 aa9.12□□□□□ -0.95
VMP1-214ENST00000592106 TDRPQ86YL5 185 aa9.12□□□□□ -0.95
VMP1-214ENST00000592106 COX18Q8N8Q8 333 aa9.12□□□□□ -0.95
VMP1-214ENST00000592106 EIF1ADQ8N9N8 165 aaKnown RBP9.12□□□□□ -0.95
VMP1-214ENST00000592106 OR5M1Q8NGP8 315 aa9.12□□□□□ -0.95
VMP1-214ENST00000592106 OR6K3Q8NGY3 331 aa9.12□□□□□ -0.95
VMP1-214ENST00000592106 ZBTB8AQ96BR9 441 aa9.12□□□□□ -0.95
VMP1-214ENST00000592106 MTERF3Q96E29 417 aa9.12□□□□□ -0.95
VMP1-214ENST00000592106 GMPPAQ96IJ6 420 aaPredicted RBP9.12□□□□□ -0.95
VMP1-214ENST00000592106 WFIKKN1Q96NZ8 548 aa9.12□□□□□ -0.95
VMP1-214ENST00000592106 TXLNGYQ9BZA5 131 aa9.12□□□□□ -0.95
VMP1-214ENST00000592106 KLHL4Q9C0H6 718 aa9.12□□□□□ -0.95
VMP1-214ENST00000592106 UBTD1Q9HAC8 227 aa9.12□□□□□ -0.95
VMP1-214ENST00000592106 GLRX2Q9NS18 164 aa9.12□□□□□ -0.95
VMP1-214ENST00000592106 ACSS1Q9NUB1 689 aaPredicted RBP9.12□□□□□ -0.95
VMP1-214ENST00000592106 OXSMQ9NWU1 459 aa9.12□□□□□ -0.95
VMP1-214ENST00000592106 FLRT3Q9NZU0 649 aa9.12□□□□□ -0.95
VMP1-214ENST00000592106 SH3BP4Q9P0V3 963 aa9.12□□□□□ -0.95
VMP1-214ENST00000592106 VDAC3Q9Y277 283 aa9.12□□□□□ -0.95
VMP1-214ENST00000592106 FIS1Q9Y3D6 152 aa9.12□□□□□ -0.95
VMP1-214ENST00000592106 MED12LQ86YW9 2145 aa9.11□□□□□ -0.95
VMP1-214ENST00000592106 GXYLT2A0PJZ3 443 aa9.11□□□□□ -0.95
VMP1-214ENST00000592106 SMIM23A6NLE4 172 aa9.11□□□□□ -0.95
VMP1-214ENST00000592106 C17orf51A8MQB3 221 aa9.11□□□□□ -0.95
VMP1-214ENST00000592106 DEFB108AA8MXU0 73 aa9.11□□□□□ -0.95
VMP1-214ENST00000592106 B4DXG7 233 aa9.11□□□□□ -0.95
VMP1-214ENST00000592106 AKAP10O43572 662 aa9.11□□□□□ -0.95
VMP1-214ENST00000592106 GMFGO60234 142 aa9.11□□□□□ -0.95
VMP1-214ENST00000592106 KRT16P08779 473 aa9.11□□□□□ -0.95
VMP1-214ENST00000592106 ALOX5P09917 674 aa9.11□□□□□ -0.95
VMP1-214ENST00000592106 FAM153BP0C7A2 387 aa9.11□□□□□ -0.95
VMP1-214ENST00000592106 PABPC4LP0CB38 370 aaKnown RBP9.11□□□□□ -0.95
VMP1-214ENST00000592106 HOXB4P17483 251 aaPredicted RBP9.11□□□□□ -0.95
VMP1-214ENST00000592106 SDC1P18827 310 aa9.11□□□□□ -0.95
VMP1-214ENST00000592106 ATP6V1C1P21283 382 aa9.11□□□□□ -0.95
VMP1-214ENST00000592106 TBXA2RP21731 343 aa9.11□□□□□ -0.95
VMP1-214ENST00000592106 CCKARP32238 428 aa9.11□□□□□ -0.95
VMP1-214ENST00000592106 SERPINB4P48594 390 aa9.11□□□□□ -0.95
VMP1-214ENST00000592106 SUCLG1P53597 346 aaKnown RBP9.11□□□□□ -0.95
VMP1-214ENST00000592106 NR1H2P55055 460 aa9.11□□□□□ -0.95
VMP1-214ENST00000592106 CLDN20P56880 219 aa9.11□□□□□ -0.95
VMP1-214ENST00000592106 ACKR1Q16570 336 aa9.11□□□□□ -0.95
VMP1-214ENST00000592106 PRSS53Q2L4Q9 553 aa9.11□□□□□ -0.95
VMP1-214ENST00000592106 EXOC3L2Q2M3D2 409 aa9.11□□□□□ -0.95
VMP1-214ENST00000592106 FAM153CQ494X1 144 aa9.11□□□□□ -0.95
VMP1-214ENST00000592106 BEX5Q5H9J7 111 aa9.11□□□□□ -0.95
VMP1-214ENST00000592106 ZNF474Q6S9Z5 364 aaPredicted RBP9.11□□□□□ -0.95
VMP1-214ENST00000592106 BEND4Q6ZU67 534 aa9.11□□□□□ -0.95
VMP1-214ENST00000592106 CXorf67Q86X51 503 aaPredicted RBP9.11□□□□□ -0.95
VMP1-214ENST00000592106 DDIASQ8IXT1 998 aa9.11□□□□□ -0.95
VMP1-214ENST00000592106 GTPBP8Q8N3Z3 284 aaPredicted RBP9.11□□□□□ -0.95
VMP1-214ENST00000592106 NATD1Q8N6N6 113 aa9.11□□□□□ -0.95
VMP1-214ENST00000592106 ZNF610Q8N9Z0 462 aa9.11□□□□□ -0.95
VMP1-214ENST00000592106 ZNF527Q8NB42 609 aa9.11□□□□□ -0.95
VMP1-214ENST00000592106 PIK3R3Q92569 461 aa9.11□□□□□ -0.95
VMP1-214ENST00000592106 JADE3Q92613 823 aa9.11□□□□□ -0.95
VMP1-214ENST00000592106 CHMP6Q96FZ7 201 aa9.11□□□□□ -0.95
VMP1-214ENST00000592106 ZC3HAV1LQ96H79 300 aaKnown RBP9.11□□□□□ -0.95
VMP1-214ENST00000592106 REXO5Q96IC2 774 aaKnown RBP9.11□□□□□ -0.95
VMP1-214ENST00000592106 EGLN2Q96KS0 407 aa9.11□□□□□ -0.95
VMP1-214ENST00000592106 FCRL1Q96LA6 429 aa9.11□□□□□ -0.95
VMP1-214ENST00000592106 TSSK3Q96PN8 268 aa9.11□□□□□ -0.95
VMP1-214ENST00000592106 BDH2Q9BUT1 245 aa9.11□□□□□ -0.95
VMP1-214ENST00000592106 GSX1Q9H4S2 264 aaPredicted RBP9.11□□□□□ -0.95
VMP1-214ENST00000592106 ZFAND3Q9H8U3 227 aa9.11□□□□□ -0.95
VMP1-214ENST00000592106 EML4Q9HC35 981 aaKnown RBP9.11□□□□□ -0.95
VMP1-214ENST00000592106 ATAD3AQ9NVI7 634 aa9.11□□□□□ -0.95
VMP1-214ENST00000592106 HIVEP1P15822 2718 aa9.11□□□□□ -0.95
VMP1-214ENST00000592106 ABCA4P78363 2273 aa9.11□□□□□ -0.95
VMP1-214ENST00000592106 SPG11Q96JI7 2443 aa9.11□□□□□ -0.95
VMP1-214ENST00000592106 MPDZO75970 2070 aa9.11□□□□□ -0.95
VMP1-214ENST00000592106 MED12Q93074 2177 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms