RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 TTMPQ5BVD1 217 aa10.18□□□□□ -0.78
SMAD4-211ENST00000590499 C1orf185Q5T7R7 199 aa10.18□□□□□ -0.78
SMAD4-211ENST00000590499 ZNF585AQ6P3V2 769 aa10.18□□□□□ -0.78
SMAD4-211ENST00000590499 B3GNT6Q6ZMB0 384 aa10.18□□□□□ -0.78
SMAD4-211ENST00000590499 SEM1Q6ZVN7 128 aa10.18□□□□□ -0.78
SMAD4-211ENST00000590499 ACAD11Q709F0 780 aa10.18□□□□□ -0.78
SMAD4-211ENST00000590499 YRDCQ86U90 279 aaKnown RBP10.18□□□□□ -0.78
SMAD4-211ENST00000590499 FADS6Q8N9I5 356 aa10.18□□□□□ -0.78
SMAD4-211ENST00000590499 ACBD4Q8NC06 268 aa10.18□□□□□ -0.78
SMAD4-211ENST00000590499 FBXO30Q8TB52 745 aa10.18□□□□□ -0.78
SMAD4-211ENST00000590499 SFXN5Q8TD22 340 aa10.18□□□□□ -0.78
SMAD4-211ENST00000590499 GPR151Q8TDV0 419 aa10.18□□□□□ -0.78
SMAD4-211ENST00000590499 RND1Q92730 232 aa10.18□□□□□ -0.78
SMAD4-211ENST00000590499 SDCCAG3Q96C92 435 aa10.18□□□□□ -0.78
SMAD4-211ENST00000590499 RMND5BQ96G75 393 aaPredicted RBP10.18□□□□□ -0.78
SMAD4-211ENST00000590499 C16orf58Q96GQ5 468 aa10.18□□□□□ -0.78
SMAD4-211ENST00000590499 PRPF18Q99633 342 aaKnown RBP10.18□□□□□ -0.78
SMAD4-211ENST00000590499 SH3GL2Q99962 352 aa10.18□□□□□ -0.78
SMAD4-211ENST00000590499 UGT2B28Q9BY64 529 aa10.18□□□□□ -0.78
SMAD4-211ENST00000590499 ZCCHC3Q9NUD5 404 aaKnown RBP10.18□□□□□ -0.78
SMAD4-211ENST00000590499 GPATCH2Q9NW75 528 aa10.18□□□□□ -0.78
SMAD4-211ENST00000590499 RNF6Q9Y252 685 aa10.18□□□□□ -0.78
SMAD4-211ENST00000590499 SLC6A5Q9Y345 797 aa10.18□□□□□ -0.78
SMAD4-211ENST00000590499 MRPS18CQ9Y3D5 142 aaKnown RBP10.18□□□□□ -0.78
SMAD4-211ENST00000590499 ANKHD1Q8IWZ3 2542 aaKnown RBP10.17□□□□□ -0.78
SMAD4-211ENST00000590499 CSMD2Q7Z408 3487 aa10.17□□□□□ -0.78
SMAD4-211ENST00000590499 IGLV3-32A0A0A0MS00 114 aa10.17□□□□□ -0.78
SMAD4-211ENST00000590499 KDM4EB2RXH2 506 aaPredicted RBP10.17□□□□□ -0.78
SMAD4-211ENST00000590499 C19orf84I3L1E1 186 aa10.17□□□□□ -0.78
SMAD4-211ENST00000590499 RNASET2O00584 256 aaKnown RBP10.17□□□□□ -0.78
SMAD4-211ENST00000590499 SCO2O43819 266 aa10.17□□□□□ -0.78
SMAD4-211ENST00000590499 KCNK2O95069 426 aa10.17□□□□□ -0.78
SMAD4-211ENST00000590499 KCNH1O95259 989 aa10.17□□□□□ -0.78
SMAD4-211ENST00000590499 UTS2O95399 124 aa10.17□□□□□ -0.78
SMAD4-211ENST00000590499 HMGN2P05204 90 aaKnown RBP10.17□□□□□ -0.78
SMAD4-211ENST00000590499 NGFRP08138 427 aa10.17□□□□□ -0.78
SMAD4-211ENST00000590499 PTGER4P35408 488 aa10.17□□□□□ -0.78
SMAD4-211ENST00000590499 CCT3P49368 545 aaKnown RBP10.17□□□□□ -0.78
SMAD4-211ENST00000590499 PRIM2P49643 509 aa10.17□□□□□ -0.78
SMAD4-211ENST00000590499 PSMD4P55036 377 aaKnown RBP10.17□□□□□ -0.78
SMAD4-211ENST00000590499 GFRA1P56159 465 aa10.17□□□□□ -0.78
SMAD4-211ENST00000590499 HBA1P69905 142 aa10.17□□□□□ -0.78
SMAD4-211ENST00000590499 PHC1P78364 1004 aa10.17□□□□□ -0.78
SMAD4-211ENST00000590499 PMPCAQ10713 525 aa10.17□□□□□ -0.78
SMAD4-211ENST00000590499 LASP1Q14847 261 aaKnown RBP10.17□□□□□ -0.78
SMAD4-211ENST00000590499 GRAMD1BQ3KR37 738 aa10.17□□□□□ -0.78
SMAD4-211ENST00000590499 LSM12Q3MHD2 195 aaKnown RBP10.17□□□□□ -0.78
SMAD4-211ENST00000590499 ACSF3Q4G176 576 aaPredicted RBP10.17□□□□□ -0.78
SMAD4-211ENST00000590499 ATG16L1Q676U5 607 aa10.17□□□□□ -0.78
SMAD4-211ENST00000590499 SP5Q6BEB4 398 aaPredicted RBP10.17□□□□□ -0.78
SMAD4-211ENST00000590499 OR5M10Q6IEU7 315 aa10.17□□□□□ -0.78
SMAD4-211ENST00000590499 OR4F3Q6IEY1 312 aa10.17□□□□□ -0.78
SMAD4-211ENST00000590499 APOOLQ6UXV4 268 aa10.17□□□□□ -0.78
SMAD4-211ENST00000590499 SZRD1Q7Z422 152 aa10.17□□□□□ -0.78
SMAD4-211ENST00000590499 MAVSQ7Z434 540 aa10.17□□□□□ -0.78
SMAD4-211ENST00000590499 ZAR1Q86SH2 424 aa10.17□□□□□ -0.78
SMAD4-211ENST00000590499 MED12LQ86YW9 2145 aa10.17□□□□□ -0.78
SMAD4-211ENST00000590499 CCDC71Q8IV32 467 aaPredicted RBP10.17□□□□□ -0.78
SMAD4-211ENST00000590499 TRIM42Q8IWZ5 723 aa10.17□□□□□ -0.78
SMAD4-211ENST00000590499 OR2M3Q8NG83 312 aa10.17□□□□□ -0.78
SMAD4-211ENST00000590499 OR8J2Q8NGG1 315 aa10.17□□□□□ -0.78
SMAD4-211ENST00000590499 OR56A1Q8NGH5 318 aa10.17□□□□□ -0.78
SMAD4-211ENST00000590499 ASB5Q8WWX0 329 aa10.17□□□□□ -0.78
SMAD4-211ENST00000590499 SLC9A6Q92581 669 aa10.17□□□□□ -0.78
SMAD4-211ENST00000590499 TESCQ96BS2 214 aa10.17□□□□□ -0.78
SMAD4-211ENST00000590499 WDYHV1Q96HA8 205 aa10.17□□□□□ -0.78
SMAD4-211ENST00000590499 MAELQ96JY0 434 aaKnown RBP10.17□□□□□ -0.78
SMAD4-211ENST00000590499 ATP6V1G3Q96LB4 118 aa10.17□□□□□ -0.78
SMAD4-211ENST00000590499 STACQ99469 402 aa10.17□□□□□ -0.78
SMAD4-211ENST00000590499 MANSC1Q9H8J5 431 aa10.17□□□□□ -0.78
SMAD4-211ENST00000590499 DUSP22Q9NRW4 184 aa10.17□□□□□ -0.78
SMAD4-211ENST00000590499 AIG1Q9NVV5 245 aa10.17□□□□□ -0.78
SMAD4-211ENST00000590499 GIN1Q9NXP7 522 aa10.17□□□□□ -0.78
SMAD4-211ENST00000590499 COQ3Q9NZJ6 369 aa10.17□□□□□ -0.78
SMAD4-211ENST00000590499 MARCOQ9UEW3 520 aaPredicted RBP10.17□□□□□ -0.78
SMAD4-211ENST00000590499 MRTO4Q9UKD2 239 aaKnown RBP10.17□□□□□ -0.78
SMAD4-211ENST00000590499 A0A0G2JNJ9 132 aa10.16□□□□□ -0.78
SMAD4-211ENST00000590499 AHRRA9YTQ3 701 aa10.16□□□□□ -0.78
SMAD4-211ENST00000590499 ALG1L2C9J202 215 aa10.16□□□□□ -0.78
SMAD4-211ENST00000590499 ZNF195O14628 629 aa10.16□□□□□ -0.78
SMAD4-211ENST00000590499 ZIC3O60481 467 aa10.16□□□□□ -0.78
SMAD4-211ENST00000590499 TOXO94900 526 aa10.16□□□□□ -0.78
SMAD4-211ENST00000590499 ACTL6AO96019 429 aa10.16□□□□□ -0.78
SMAD4-211ENST00000590499 ALOX5P09917 674 aa10.16□□□□□ -0.78
SMAD4-211ENST00000590499 EPHA3P29320 983 aa10.16□□□□□ -0.78
SMAD4-211ENST00000590499 CHRNB4P30926 498 aa10.16□□□□□ -0.78
SMAD4-211ENST00000590499 LCN1P31025 176 aa10.16□□□□□ -0.78
SMAD4-211ENST00000590499 KIR3DL1P43629 444 aa10.16□□□□□ -0.78
SMAD4-211ENST00000590499 EIF1AXP47813 144 aaKnown RBP10.16□□□□□ -0.78
SMAD4-211ENST00000590499 RFX3P48380 749 aa10.16□□□□□ -0.78
SMAD4-211ENST00000590499 B3GALT5-AS1P59052 145 aa10.16□□□□□ -0.78
SMAD4-211ENST00000590499 TFF3Q07654 80 aa10.16□□□□□ -0.78
SMAD4-211ENST00000590499 TOMM20Q15388 145 aa10.16□□□□□ -0.78
SMAD4-211ENST00000590499 CDC73Q6P1J9 531 aa10.16□□□□□ -0.78
SMAD4-211ENST00000590499 WDR75Q8IWA0 830 aaKnown RBP10.16□□□□□ -0.78
SMAD4-211ENST00000590499 PM20D2Q8IYS1 436 aa10.16□□□□□ -0.78
SMAD4-211ENST00000590499 CLECL1Q8IZS7 167 aa10.16□□□□□ -0.78
SMAD4-211ENST00000590499 COX18Q8N8Q8 333 aa10.16□□□□□ -0.78
SMAD4-211ENST00000590499 LILRB4Q8NHJ6 448 aa10.16□□□□□ -0.78
SMAD4-211ENST00000590499 ZNF75CPQ92670 426 aaPredicted RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms