RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 LYRM4Q9HD34 91 aa6.9□□□□□ -1.3
ZNF540-206ENST00000589117 ATP13A2Q9NQ11 1180 aa6.9□□□□□ -1.3
ZNF540-206ENST00000589117 CTPS2Q9NRF8 586 aa6.9□□□□□ -1.3
ZNF540-206ENST00000589117 MKI67P46013 3256 aaKnown RBP6.9□□□□□ -1.3
ZNF540-206ENST00000589117 CDC14CA4D256 554 aa6.9□□□□□ -1.31
ZNF540-206ENST00000589117 KDM4EB2RXH2 506 aaPredicted RBP6.9□□□□□ -1.31
ZNF540-206ENST00000589117 ADAM23O75077 832 aa6.9□□□□□ -1.31
ZNF540-206ENST00000589117 CDRT1O95170 752 aa6.9□□□□□ -1.31
ZNF540-206ENST00000589117 HLA-DPB1P04440 258 aa6.9□□□□□ -1.31
ZNF540-206ENST00000589117 DBIP07108 87 aaKnown RBP6.9□□□□□ -1.31
ZNF540-206ENST00000589117 PAICSP22234 425 aaKnown RBP6.9□□□□□ -1.31
ZNF540-206ENST00000589117 HNRNPA2B1P22626 353 aaKnown RBP6.9□□□□□ -1.31
ZNF540-206ENST00000589117 AKT2P31751 481 aa6.9□□□□□ -1.31
ZNF540-206ENST00000589117 ETV5P41161 510 aa6.9□□□□□ -1.31
ZNF540-206ENST00000589117 ETV1P50549 477 aa6.9□□□□□ -1.31
ZNF540-206ENST00000589117 ILF3Q12906 894 aaKnown RBP eCLIP6.9□□□□□ -1.31
ZNF540-206ENST00000589117 DEFB134Q4QY38 66 aa6.9□□□□□ -1.31
ZNF540-206ENST00000589117 TMEM196Q5HYL7 178 aa6.9□□□□□ -1.31
ZNF540-206ENST00000589117 TYW3Q6IPR3 259 aaKnown RBP6.9□□□□□ -1.31
ZNF540-206ENST00000589117 FIGLAQ6QHK4 219 aa6.9□□□□□ -1.31
ZNF540-206ENST00000589117 CCBE1Q6UXH8 406 aaPredicted RBP6.9□□□□□ -1.31
ZNF540-206ENST00000589117 UBE2Q1Q7Z7E8 422 aa6.9□□□□□ -1.31
ZNF540-206ENST00000589117 GID4Q8IVV7 300 aa6.9□□□□□ -1.31
ZNF540-206ENST00000589117 OR2L13Q8N349 312 aa6.9□□□□□ -1.31
ZNF540-206ENST00000589117 CDRT4Q8N9R6 151 aa6.9□□□□□ -1.31
ZNF540-206ENST00000589117 FGF14Q92915 247 aa6.9□□□□□ -1.31
ZNF540-206ENST00000589117 SLC35A4Q96G79 324 aa6.9□□□□□ -1.31
ZNF540-206ENST00000589117 FAM46AQ96IP4 442 aaKnown RBP6.9□□□□□ -1.31
ZNF540-206ENST00000589117 MYADMQ96S97 322 aa6.9□□□□□ -1.31
ZNF540-206ENST00000589117 ZFYVE21Q9BQ24 234 aa6.9□□□□□ -1.31
ZNF540-206ENST00000589117 RSPO3Q9BXY4 272 aaPredicted RBP6.9□□□□□ -1.31
ZNF540-206ENST00000589117 QRSL1Q9H0R6 528 aaKnown RBP6.9□□□□□ -1.31
ZNF540-206ENST00000589117 PIGUQ9H490 435 aa6.9□□□□□ -1.31
ZNF540-206ENST00000589117 EGLN3Q9H6Z9 239 aa6.9□□□□□ -1.31
ZNF540-206ENST00000589117 MOV10Q9HCE1 1003 aaKnown RBP6.9□□□□□ -1.31
ZNF540-206ENST00000589117 TXNL4BQ9NX01 149 aaKnown RBP6.9□□□□□ -1.31
ZNF540-206ENST00000589117 NPAP1Q9NZP6 1156 aa6.9□□□□□ -1.31
ZNF540-206ENST00000589117 MSRAQ9UJ68 235 aa6.9□□□□□ -1.31
ZNF540-206ENST00000589117 DAPP1Q9UN19 280 aa6.9□□□□□ -1.31
ZNF540-206ENST00000589117 SATB2Q9UPW6 733 aa6.9□□□□□ -1.31
ZNF540-206ENST00000589117 ZNF443Q9Y2A4 671 aaPredicted RBP6.9□□□□□ -1.31
ZNF540-206ENST00000589117 GRIP1Q9Y3R0 1128 aa6.9□□□□□ -1.31
ZNF540-206ENST00000589117 KCNE3Q9Y6H6 103 aa6.9□□□□□ -1.31
ZNF540-206ENST00000589117 ALPK3Q96L96 1907 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 A0A087WV62 115 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 TRAPPC13A5PLN9 417 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 POM121BA6NF01 834 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 OR5K4A6NMS3 321 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 C2orf74A8MZ97 194 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 BTN3A3O00478 584 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 RCBTB2O95199 551 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 KLF8O95600 359 aaPredicted RBP6.89□□□□□ -1.31
ZNF540-206ENST00000589117 EPPINO95925 133 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 KRT8P05787 483 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 IFI6P09912 130 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 CPMP14384 443 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 EN2P19622 333 aaPredicted RBP6.89□□□□□ -1.31
ZNF540-206ENST00000589117 DRD1P21728 446 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 CFL1P23528 166 aaKnown RBP6.89□□□□□ -1.31
ZNF540-206ENST00000589117 FGF9P31371 208 aaPredicted RBP6.89□□□□□ -1.31
ZNF540-206ENST00000589117 SDC2P34741 201 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 OMPP47874 163 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 SKP1P63208 163 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 MRPS21P82921 87 aaKnown RBP6.89□□□□□ -1.31
ZNF540-206ENST00000589117 C19orf57Q0VDD7 668 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 CLEC12AQ5QGZ9 265 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 NXNL2Q5VZ03 156 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 FBXO42Q6P3S6 717 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 MZT2AQ6P582 158 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 XKRXQ6PP77 449 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 C8orf86Q6ZUL3 223 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 VN1R4Q7Z5H5 301 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 OOSP2Q86WS3 158 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 KLHL36Q8N4N3 616 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 GDPD1Q8N9F7 314 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 POGLUT1Q8NBL1 392 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 SLC16A11Q8NCK7 471 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 FAM83FQ8NEG4 500 aaPredicted RBP6.89□□□□□ -1.31
ZNF540-206ENST00000589117 BAHD1Q8TBE0 780 aaPredicted RBP6.89□□□□□ -1.31
ZNF540-206ENST00000589117 OR1E3Q8WZA6 343 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 RSC1A1Q92681 617 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 MRPL38Q96DV4 380 aaKnown RBP6.89□□□□□ -1.31
ZNF540-206ENST00000589117 TM4SF19Q96DZ7 209 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 CD180Q99467 661 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 ANKRA2Q9H9E1 313 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 DUSP22Q9NRW4 184 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 SEMA4GQ9NTN9 838 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 C14orf105Q9NVL8 296 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 CNIH4Q9P003 139 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 CLCA2Q9UQC9 943 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 TMEM5Q9Y2B1 443 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 PCDHGB2Q9Y5G2 931 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 FABP12A6NFH5 140 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 C4orf51C9J302 202 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 DLL1O00548 723 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 SURF4O15260 269 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 FCMRO60667 390 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 FMO6PO60774 539 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 ATP6V1G1O75348 118 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms