RNA–Protein interactions for RNA: ENST00000586538.1

ACTN4-209, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-209ENST00000586538 FOXF2Q12947 444 aa10.15□□□□□ -0.78
ACTN4-209ENST00000586538 SNTB1Q13884 538 aaKnown RBP10.15□□□□□ -0.78
ACTN4-209ENST00000586538 PON3Q15166 354 aa10.15□□□□□ -0.78
ACTN4-209ENST00000586538 GRAMD1BQ3KR37 738 aa10.15□□□□□ -0.78
ACTN4-209ENST00000586538 SPDYE7PQ495Y7 208 aa10.15□□□□□ -0.78
ACTN4-209ENST00000586538 CPTPQ5TA50 214 aa10.15□□□□□ -0.78
ACTN4-209ENST00000586538 FAM219BQ5XKK7 198 aa10.15□□□□□ -0.78
ACTN4-209ENST00000586538 MFSD12Q6NUT3 480 aa10.15□□□□□ -0.78
ACTN4-209ENST00000586538 WDR93Q6P2C0 686 aa10.15□□□□□ -0.78
ACTN4-209ENST00000586538 OR2T11Q8NH01 316 aa10.15□□□□□ -0.78
ACTN4-209ENST00000586538 LINC01560Q8TB33 94 aa10.15□□□□□ -0.78
ACTN4-209ENST00000586538 SFXN5Q8TD22 340 aa10.15□□□□□ -0.78
ACTN4-209ENST00000586538 ADAMTS15Q8TE58 950 aa10.15□□□□□ -0.78
ACTN4-209ENST00000586538 OR5P2Q8WZ92 322 aa10.15□□□□□ -0.78
ACTN4-209ENST00000586538 PIK3R3Q92569 461 aa10.15□□□□□ -0.78
ACTN4-209ENST00000586538 CAVIN3Q969G5 261 aa10.15□□□□□ -0.78
ACTN4-209ENST00000586538 REXO5Q96IC2 774 aaKnown RBP10.15□□□□□ -0.78
ACTN4-209ENST00000586538 BTBD2Q9BX70 525 aa10.15□□□□□ -0.78
ACTN4-209ENST00000586538 C12orf65Q9H3J6 166 aaKnown RBP10.15□□□□□ -0.78
ACTN4-209ENST00000586538 TUBB1Q9H4B7 451 aa10.15□□□□□ -0.78
ACTN4-209ENST00000586538 RNF122Q9H9V4 155 aa10.15□□□□□ -0.78
ACTN4-209ENST00000586538 TNFRSF12AQ9NP84 129 aa10.15□□□□□ -0.78
ACTN4-209ENST00000586538 TIGARQ9NQ88 270 aa10.15□□□□□ -0.78
ACTN4-209ENST00000586538 CCM2LQ9NUG4 571 aaPredicted RBP10.15□□□□□ -0.78
ACTN4-209ENST00000586538 PROCRQ9UNN8 238 aa10.15□□□□□ -0.78
ACTN4-209ENST00000586538 ZNF337Q9Y3M9 751 aa10.15□□□□□ -0.78
ACTN4-209ENST00000586538 SNX8Q9Y5X2 465 aa10.15□□□□□ -0.78
ACTN4-209ENST00000586538 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.14□□□□□ -0.79
ACTN4-209ENST00000586538 DUXAA6NLW8 204 aa10.14□□□□□ -0.79
ACTN4-209ENST00000586538 CTIFO43310 598 aaKnown RBP10.14□□□□□ -0.79
ACTN4-209ENST00000586538 PEX11AO75192 247 aa10.14□□□□□ -0.79
ACTN4-209ENST00000586538 KCNK2O95069 426 aa10.14□□□□□ -0.79
ACTN4-209ENST00000586538 SYNGR4O95473 234 aa10.14□□□□□ -0.79
ACTN4-209ENST00000586538 AK1P00568 194 aa10.14□□□□□ -0.79
ACTN4-209ENST00000586538 TUBBP07437 444 aa10.14□□□□□ -0.79
ACTN4-209ENST00000586538 CHRNGP07510 517 aa10.14□□□□□ -0.79
ACTN4-209ENST00000586538 CD99P14209 185 aa10.14□□□□□ -0.79
ACTN4-209ENST00000586538 POU2F1P14859 743 aa10.14□□□□□ -0.79
ACTN4-209ENST00000586538 PPP3CBP16298 524 aa10.14□□□□□ -0.79
ACTN4-209ENST00000586538 ELK4P28324 431 aa10.14□□□□□ -0.79
ACTN4-209ENST00000586538 CD79BP40259 229 aa10.14□□□□□ -0.79
ACTN4-209ENST00000586538 SUMO3P55854 103 aaPredicted RBP10.14□□□□□ -0.79
ACTN4-209ENST00000586538 CLDN15P56746 228 aa10.14□□□□□ -0.79
ACTN4-209ENST00000586538 VSNL1P62760 191 aa10.14□□□□□ -0.79
ACTN4-209ENST00000586538 PRSS53Q2L4Q9 553 aa10.14□□□□□ -0.79
ACTN4-209ENST00000586538 ZNF385BQ569K4 471 aa10.14□□□□□ -0.79
ACTN4-209ENST00000586538 XKR7Q5GH72 579 aa10.14□□□□□ -0.79
ACTN4-209ENST00000586538 ANKRD26P1Q6NSI1 321 aa10.14□□□□□ -0.79
ACTN4-209ENST00000586538 CDC73Q6P1J9 531 aa10.14□□□□□ -0.79
ACTN4-209ENST00000586538 ESPNLQ6ZVH7 1005 aa10.14□□□□□ -0.79
ACTN4-209ENST00000586538 FAM214BQ7L5A3 538 aa10.14□□□□□ -0.79
ACTN4-209ENST00000586538 STK32CQ86UX6 486 aa10.14□□□□□ -0.79
ACTN4-209ENST00000586538 GTPBP8Q8N3Z3 284 aaPredicted RBP10.14□□□□□ -0.79
ACTN4-209ENST00000586538 LRRN4CLQ8ND94 238 aa10.14□□□□□ -0.79
ACTN4-209ENST00000586538 OR2W6PQ8NHA6 318 aa10.14□□□□□ -0.79
ACTN4-209ENST00000586538 CLHC1Q8NHS4 586 aa10.14□□□□□ -0.79
ACTN4-209ENST00000586538 PSMA8Q8TAA3 256 aa10.14□□□□□ -0.79
ACTN4-209ENST00000586538 FAM110BQ8TC76 370 aa10.14□□□□□ -0.79
ACTN4-209ENST00000586538 AGR3Q8TD06 166 aa10.14□□□□□ -0.79
ACTN4-209ENST00000586538 TUBGCP3Q96CW5 907 aa10.14□□□□□ -0.79
ACTN4-209ENST00000586538 FAM120BQ96EK7 910 aaKnown RBP10.14□□□□□ -0.79
ACTN4-209ENST00000586538 GIMAP5Q96F15 307 aa10.14□□□□□ -0.79
ACTN4-209ENST00000586538 PGM2Q96G03 612 aa10.14□□□□□ -0.79
ACTN4-209ENST00000586538 GMPPAQ96IJ6 420 aaPredicted RBP10.14□□□□□ -0.79
ACTN4-209ENST00000586538 MED18Q9BUE0 208 aa10.14□□□□□ -0.79
ACTN4-209ENST00000586538 TMEM109Q9BVC6 243 aa10.14□□□□□ -0.79
ACTN4-209ENST00000586538 ACTRT3Q9BYD9 372 aa10.14□□□□□ -0.79
ACTN4-209ENST00000586538 BHLHE41Q9C0J9 482 aaPredicted RBP10.14□□□□□ -0.79
ACTN4-209ENST00000586538 PIGUQ9H490 435 aa10.14□□□□□ -0.79
ACTN4-209ENST00000586538 SSU72Q9NP77 194 aaKnown RBP10.14□□□□□ -0.79
ACTN4-209ENST00000586538 NOP53Q9NZM5 478 aaKnown RBP10.14□□□□□ -0.79
ACTN4-209ENST00000586538 BAIAP2L1Q9UHR4 511 aa10.14□□□□□ -0.79
ACTN4-209ENST00000586538 PCDHGB4Q9UN71 923 aa10.14□□□□□ -0.79
ACTN4-209ENST00000586538 VDAC3Q9Y277 283 aa10.14□□□□□ -0.79
ACTN4-209ENST00000586538 TESMINQ9Y4I5 508 aa10.14□□□□□ -0.79
ACTN4-209ENST00000586538 PTGDR2Q9Y5Y4 395 aa10.14□□□□□ -0.79
ACTN4-209ENST00000586538 GXYLT2A0PJZ3 443 aa10.13□□□□□ -0.79
ACTN4-209ENST00000586538 C16orf97H3BN30 126 aa10.13□□□□□ -0.79
ACTN4-209ENST00000586538 EIF1AYO14602 144 aaKnown RBP10.13□□□□□ -0.79
ACTN4-209ENST00000586538 TM9SF1O15321 606 aa10.13□□□□□ -0.79
ACTN4-209ENST00000586538 RGS16O15492 202 aaPredicted RBP10.13□□□□□ -0.79
ACTN4-209ENST00000586538 CFLARO15519 480 aa10.13□□□□□ -0.79
ACTN4-209ENST00000586538 SPAG7O75391 227 aa10.13□□□□□ -0.79
ACTN4-209ENST00000586538 SLU7O95391 586 aaKnown RBP10.13□□□□□ -0.79
ACTN4-209ENST00000586538 TGM6O95932 706 aa10.13□□□□□ -0.79
ACTN4-209ENST00000586538 AGR2O95994 175 aa10.13□□□□□ -0.79
ACTN4-209ENST00000586538 HMGN2P05204 90 aaKnown RBP10.13□□□□□ -0.79
ACTN4-209ENST00000586538 BPGMP07738 259 aa10.13□□□□□ -0.79
ACTN4-209ENST00000586538 ACP2P11117 423 aa10.13□□□□□ -0.79
ACTN4-209ENST00000586538 ADH6P28332 368 aa10.13□□□□□ -0.79
ACTN4-209ENST00000586538 EIF1AXP47813 144 aaKnown RBP10.13□□□□□ -0.79
ACTN4-209ENST00000586538 CCT3P49368 545 aaKnown RBP10.13□□□□□ -0.79
ACTN4-209ENST00000586538 CTBP2P56545 445 aa10.13□□□□□ -0.79
ACTN4-209ENST00000586538 RAC1P63000 192 aa10.13□□□□□ -0.79
ACTN4-209ENST00000586538 LASP1Q14847 261 aaKnown RBP10.13□□□□□ -0.79
ACTN4-209ENST00000586538 DUSP5Q16690 384 aa10.13□□□□□ -0.79
ACTN4-209ENST00000586538 UGT3A2Q3SY77 523 aa10.13□□□□□ -0.79
ACTN4-209ENST00000586538 KRT71Q3SY84 523 aa10.13□□□□□ -0.79
ACTN4-209ENST00000586538 C6orf136Q5SQH8 315 aa10.13□□□□□ -0.79
ACTN4-209ENST00000586538 IL23RQ5VWK5 629 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms