RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	CCNJ	Q5T5M9	372 aa		12.05	□□□□□ -0.48
SREBF1-223	ENST00000584760	AAGAB	Q6PD74	315 aa		12.05	□□□□□ -0.48
SREBF1-223	ENST00000584760	ENPP6	Q6UWR7	440 aa		12.05	□□□□□ -0.48
SREBF1-223	ENST00000584760	ADGRE4P	Q86SQ3	457 aa		12.05	□□□□□ -0.48
SREBF1-223	ENST00000584760	RELL2	Q8NC24	303 aa	Predicted RBP	12.05	□□□□□ -0.48
SREBF1-223	ENST00000584760	TNIP2	Q8NFZ5	429 aa		12.05	□□□□□ -0.48
SREBF1-223	ENST00000584760	OR4C3	Q8NH37	302 aa		12.05	□□□□□ -0.48
SREBF1-223	ENST00000584760	OR5AK3P	Q8NH89	298 aa		12.05	□□□□□ -0.48
SREBF1-223	ENST00000584760	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	12.05	□□□□□ -0.48
SREBF1-223	ENST00000584760	ZPLD1	Q8TCW7	415 aa		12.05	□□□□□ -0.48
SREBF1-223	ENST00000584760	DUSP19	Q8WTR2	217 aa		12.05	□□□□□ -0.48
SREBF1-223	ENST00000584760	CDS1	Q92903	461 aa		12.05	□□□□□ -0.48
SREBF1-223	ENST00000584760	ARL8A	Q96BM9	186 aa		12.05	□□□□□ -0.48
SREBF1-223	ENST00000584760	TESC	Q96BS2	214 aa		12.05	□□□□□ -0.48
SREBF1-223	ENST00000584760	MOAP1	Q96BY2	351 aa		12.05	□□□□□ -0.48
SREBF1-223	ENST00000584760	C1GALT1C1	Q96EU7	318 aa		12.05	□□□□□ -0.48
SREBF1-223	ENST00000584760	ZNF559	Q9BR84	538 aa		12.05	□□□□□ -0.48
SREBF1-223	ENST00000584760	BTBD2	Q9BX70	525 aa		12.05	□□□□□ -0.48
SREBF1-223	ENST00000584760	ACTRT3	Q9BYD9	372 aa		12.05	□□□□□ -0.48
SREBF1-223	ENST00000584760	DPY30	Q9C005	99 aa		12.05	□□□□□ -0.48
SREBF1-223	ENST00000584760	SERHL2	Q9H4I8	314 aa		12.05	□□□□□ -0.48
SREBF1-223	ENST00000584760	MED11	Q9P086	117 aa		12.05	□□□□□ -0.48
SREBF1-223	ENST00000584760	MARCO	Q9UEW3	520 aa	Predicted RBP	12.05	□□□□□ -0.48
SREBF1-223	ENST00000584760	RPH3A	Q9Y2J0	694 aa	Predicted RBP	12.05	□□□□□ -0.48
SREBF1-223	ENST00000584760	HSPB2	A8KAH6	182 aa		12.04	□□□□□ -0.48
SREBF1-223	ENST00000584760		H0Y3Z8	333 aa		12.04	□□□□□ -0.48
SREBF1-223	ENST00000584760	KLF11	O14901	512 aa		12.04	□□□□□ -0.48
SREBF1-223	ENST00000584760	CFLAR	O15519	480 aa		12.04	□□□□□ -0.48
SREBF1-223	ENST00000584760	SCN2B	O60939	215 aa		12.04	□□□□□ -0.48
SREBF1-223	ENST00000584760	KRT16	P08779	473 aa		12.04	□□□□□ -0.48
SREBF1-223	ENST00000584760	SOAT1	P35610	550 aa		12.04	□□□□□ -0.48
SREBF1-223	ENST00000584760	STAR	P49675	285 aa		12.04	□□□□□ -0.48
SREBF1-223	ENST00000584760	ZNF136	P52737	540 aa		12.04	□□□□□ -0.48
SREBF1-223	ENST00000584760	PHC1	P78364	1004 aa		12.04	□□□□□ -0.48
SREBF1-223	ENST00000584760	POU6F2	P78424	691 aa	Predicted RBP	12.04	□□□□□ -0.48
SREBF1-223	ENST00000584760	RCAN2	Q14206	197 aa		12.04	□□□□□ -0.48
SREBF1-223	ENST00000584760	HSPB2	Q16082	182 aa		12.04	□□□□□ -0.48
SREBF1-223	ENST00000584760	DPY19L1	Q2PZI1	675 aa		12.04	□□□□□ -0.48
SREBF1-223	ENST00000584760	SLC25A35	Q3KQZ1	300 aa		12.04	□□□□□ -0.48
SREBF1-223	ENST00000584760	SPDYE7P	Q495Y7	208 aa		12.04	□□□□□ -0.48
SREBF1-223	ENST00000584760	SPANXN4	Q5MJ08	99 aa		12.04	□□□□□ -0.48
SREBF1-223	ENST00000584760	ATG16L1	Q676U5	607 aa		12.04	□□□□□ -0.48
SREBF1-223	ENST00000584760	POMZP3	Q6PJE2	187 aa		12.04	□□□□□ -0.48
SREBF1-223	ENST00000584760	MAVS	Q7Z434	540 aa		12.04	□□□□□ -0.48
SREBF1-223	ENST00000584760	WDR75	Q8IWA0	830 aa	Known RBP	12.04	□□□□□ -0.48
SREBF1-223	ENST00000584760	TEX37	Q96LM6	180 aa		12.04	□□□□□ -0.48
SREBF1-223	ENST00000584760	TRIB1	Q96RU8	372 aa		12.04	□□□□□ -0.48
SREBF1-223	ENST00000584760	TUBA1C	Q9BQE3	449 aa		12.04	□□□□□ -0.48
SREBF1-223	ENST00000584760	MANSC1	Q9H8J5	431 aa		12.04	□□□□□ -0.48
SREBF1-223	ENST00000584760	CALHM2	Q9HA72	323 aa		12.04	□□□□□ -0.48
SREBF1-223	ENST00000584760	AIG1	Q9NVV5	245 aa		12.04	□□□□□ -0.48
SREBF1-223	ENST00000584760	CLCF1	Q9UBD9	225 aa		12.04	□□□□□ -0.48
SREBF1-223	ENST00000584760	FAF1	Q9UNN5	650 aa	Predicted RBP	12.04	□□□□□ -0.48
SREBF1-223	ENST00000584760	HEATR5A	Q86XA9	2040 aa		12.03	□□□□□ -0.48
SREBF1-223	ENST00000584760	RNF103-CHMP3	A0A140T963	221 aa		12.03	□□□□□ -0.48
SREBF1-223	ENST00000584760	TRPC5OS	A6NMA1	111 aa		12.03	□□□□□ -0.48
SREBF1-223	ENST00000584760		E9PBE3	544 aa		12.03	□□□□□ -0.48
SREBF1-223	ENST00000584760	NDUFB5	O43674	189 aa		12.03	□□□□□ -0.48
SREBF1-223	ENST00000584760	HK1	P19367	917 aa		12.03	□□□□□ -0.48
SREBF1-223	ENST00000584760	EPHA3	P29320	983 aa		12.03	□□□□□ -0.48
SREBF1-223	ENST00000584760	CLNS1A	P54105	237 aa	Known RBP	12.03	□□□□□ -0.48
SREBF1-223	ENST00000584760	RPS26	P62854	115 aa	Known RBP	12.03	□□□□□ -0.48
SREBF1-223	ENST00000584760	MYBPH	Q13203	477 aa		12.03	□□□□□ -0.48
SREBF1-223	ENST00000584760	TMEM44	Q2T9K0	475 aa		12.03	□□□□□ -0.48
SREBF1-223	ENST00000584760	DCST2	Q5T1A1	773 aa		12.03	□□□□□ -0.48
SREBF1-223	ENST00000584760	RAET1L	Q5VY80	246 aa		12.03	□□□□□ -0.48
SREBF1-223	ENST00000584760	ANKRD46	Q86W74	232 aa		12.03	□□□□□ -0.48
SREBF1-223	ENST00000584760	TGIF2LY	Q8IUE0	185 aa		12.03	□□□□□ -0.48
SREBF1-223	ENST00000584760	DMRTC2	Q8IXT2	367 aa	Predicted RBP	12.03	□□□□□ -0.48
SREBF1-223	ENST00000584760	CLEC4F	Q8N1N0	589 aa		12.03	□□□□□ -0.48
SREBF1-223	ENST00000584760	C9orf106	Q8NAJ2	232 aa		12.03	□□□□□ -0.48
SREBF1-223	ENST00000584760	GATS	Q8NAP1	163 aa		12.03	□□□□□ -0.48
SREBF1-223	ENST00000584760	OR5D16	Q8NGK9	328 aa		12.03	□□□□□ -0.48
SREBF1-223	ENST00000584760	CHMP6	Q96FZ7	201 aa		12.03	□□□□□ -0.48
SREBF1-223	ENST00000584760	MAEL	Q96JY0	434 aa	Known RBP	12.03	□□□□□ -0.48
SREBF1-223	ENST00000584760	OR7D2	Q96RA2	312 aa		12.03	□□□□□ -0.48
SREBF1-223	ENST00000584760	UCN2	Q96RP3	112 aa		12.03	□□□□□ -0.48
SREBF1-223	ENST00000584760	WDR55	Q9H6Y2	383 aa	Predicted RBP	12.03	□□□□□ -0.48
SREBF1-223	ENST00000584760	PTGES2	Q9H7Z7	377 aa		12.03	□□□□□ -0.48
SREBF1-223	ENST00000584760	UBQLN4	Q9NRR5	601 aa		12.03	□□□□□ -0.48
SREBF1-223	ENST00000584760	KCNE3	Q9Y6H6	103 aa		12.03	□□□□□ -0.48
SREBF1-223	ENST00000584760	ANKHD1	Q8IWZ3	2542 aa	Known RBP	12.02	□□□□□ -0.48
SREBF1-223	ENST00000584760	GOLGA8Q	A0A0J9YX86	632 aa		12.02	□□□□□ -0.49
SREBF1-223	ENST00000584760	PRSS51	A0A1B0GVH4	220 aa		12.02	□□□□□ -0.49
SREBF1-223	ENST00000584760		A0A1W2PQD3	144 aa		12.02	□□□□□ -0.49
SREBF1-223	ENST00000584760	OR2M5	A3KFT3	312 aa		12.02	□□□□□ -0.49
SREBF1-223	ENST00000584760	FAM221A	A4D161	298 aa		12.02	□□□□□ -0.49
SREBF1-223	ENST00000584760	GOLGA8O	A6NCC3	632 aa		12.02	□□□□□ -0.49
SREBF1-223	ENST00000584760	CLCA1	A8K7I4	914 aa		12.02	□□□□□ -0.49
SREBF1-223	ENST00000584760	NPIPB9	F8W1W9	429 aa		12.02	□□□□□ -0.49
SREBF1-223	ENST00000584760	GOLGA8N	F8WBI6	632 aa		12.02	□□□□□ -0.49
SREBF1-223	ENST00000584760	SLCO1B7	G3V0H7	640 aa		12.02	□□□□□ -0.49
SREBF1-223	ENST00000584760	ZNF195	O14628	629 aa		12.02	□□□□□ -0.49
SREBF1-223	ENST00000584760	HCRTR2	O43614	444 aa		12.02	□□□□□ -0.49
SREBF1-223	ENST00000584760	SOX30	O94993	753 aa		12.02	□□□□□ -0.49
SREBF1-223	ENST00000584760	IL2RA	P01589	272 aa		12.02	□□□□□ -0.49
SREBF1-223	ENST00000584760	KIT	P10721	976 aa		12.02	□□□□□ -0.49
SREBF1-223	ENST00000584760	H2AFX	P16104	143 aa	Predicted RBP	12.02	□□□□□ -0.49
SREBF1-223	ENST00000584760	KLK2	P20151	261 aa		12.02	□□□□□ -0.49
SREBF1-223	ENST00000584760	BMP5	P22003	454 aa		12.02	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 24 ms