RNA–Protein interactions for RNA: ENST00000584168.5

CDK5RAP3-232, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 2,684 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-232ENST00000584168 PLSCR2Q9NRY7 297 aa11.15□□□□□ -0.62
CDK5RAP3-232ENST00000584168 RBM22Q9NW64 420 aaKnown RBP eCLIP11.15□□□□□ -0.62
CDK5RAP3-232ENST00000584168 PLEKHB1Q9UF11 243 aaPredicted RBP11.15□□□□□ -0.62
CDK5RAP3-232ENST00000584168 GIMAP2Q9UG22 337 aa11.15□□□□□ -0.62
CDK5RAP3-232ENST00000584168 NPFFR2Q9Y5X5 522 aa11.15□□□□□ -0.62
CDK5RAP3-232ENST00000584168 ZFP37Q9Y6Q3 630 aaPredicted RBP11.15□□□□□ -0.62
CDK5RAP3-232ENST00000584168 MBTPS2O43462 519 aa11.15□□□□□ -0.62
CDK5RAP3-232ENST00000584168 HCRTR2O43614 444 aa11.15□□□□□ -0.62
CDK5RAP3-232ENST00000584168 PRAMEF2O60811 474 aa11.15□□□□□ -0.62
CDK5RAP3-232ENST00000584168 CDRT1O95170 752 aa11.15□□□□□ -0.62
CDK5RAP3-232ENST00000584168 HLA-DQB2P05538 268 aa11.15□□□□□ -0.62
CDK5RAP3-232ENST00000584168 IFNGR1P15260 489 aa11.15□□□□□ -0.62
CDK5RAP3-232ENST00000584168 ZNF14P17017 642 aaPredicted RBP11.15□□□□□ -0.62
CDK5RAP3-232ENST00000584168 NFYAP23511 347 aaPredicted RBP11.15□□□□□ -0.62
CDK5RAP3-232ENST00000584168 S100A11P31949 105 aa11.15□□□□□ -0.62
CDK5RAP3-232ENST00000584168 THBS2P35442 1172 aa11.15□□□□□ -0.62
CDK5RAP3-232ENST00000584168 DAPP51397 102 aa11.15□□□□□ -0.62
CDK5RAP3-232ENST00000584168 SLC9A5Q14940 896 aa11.15□□□□□ -0.62
CDK5RAP3-232ENST00000584168 CNIH2Q6PI25 160 aa11.15□□□□□ -0.62
CDK5RAP3-232ENST00000584168 C11orf88Q6PI97 169 aa11.15□□□□□ -0.62
CDK5RAP3-232ENST00000584168 PAPD4Q6PIY7 484 aaKnown RBP11.15□□□□□ -0.62
CDK5RAP3-232ENST00000584168 GDPGP1Q6ZNW5 385 aa11.15□□□□□ -0.62
CDK5RAP3-232ENST00000584168 LDB1Q86U70 411 aaPredicted RBP11.15□□□□□ -0.62
CDK5RAP3-232ENST00000584168 ARHGAP12Q8IWW6 846 aa11.15□□□□□ -0.62
CDK5RAP3-232ENST00000584168 PGBD5Q8N414 524 aa11.15□□□□□ -0.62
CDK5RAP3-232ENST00000584168 C2orf15Q8WU43 125 aaKnown RBP11.15□□□□□ -0.62
CDK5RAP3-232ENST00000584168 EXT2Q93063 718 aa11.15□□□□□ -0.62
CDK5RAP3-232ENST00000584168 ZNF707Q96C28 371 aaPredicted RBP11.15□□□□□ -0.62
CDK5RAP3-232ENST00000584168 HMCESQ96FZ2 354 aa11.15□□□□□ -0.62
CDK5RAP3-232ENST00000584168 GAL3ST4Q96RP7 486 aa11.15□□□□□ -0.62
CDK5RAP3-232ENST00000584168 MAPKAP1Q9BPZ7 522 aa11.15□□□□□ -0.62
CDK5RAP3-232ENST00000584168 SOSTQ9BQB4 213 aa11.15□□□□□ -0.62
CDK5RAP3-232ENST00000584168 SPON2Q9BUD6 331 aa11.15□□□□□ -0.62
CDK5RAP3-232ENST00000584168 SLC25A32Q9H2D1 315 aa11.15□□□□□ -0.62
CDK5RAP3-232ENST00000584168 PRO1933Q9H354 126 aa11.15□□□□□ -0.62
CDK5RAP3-232ENST00000584168 AKTIPQ9H8T0 292 aa11.15□□□□□ -0.62
CDK5RAP3-232ENST00000584168 LIMD1Q9UGP4 676 aa11.15□□□□□ -0.62
CDK5RAP3-232ENST00000584168 PTGDR2Q9Y5Y4 395 aa11.15□□□□□ -0.62
CDK5RAP3-232ENST00000584168 MCRIP1C9JLW8 97 aa11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 C5orf67F2Z3F1 127 aa11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 AP4M1O00189 453 aa11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 ITGB1BP1O14713 200 aa11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 MATN3O15232 486 aa11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 SMAD6O43541 496 aaKnown RBP11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 TMEM127O75204 238 aa11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 NPSP0C0P6 89 aa11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 PPP3CBP16298 524 aa11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 GGT1P19440 569 aa11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 AGAP20933 346 aa11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 NPBWR1P48145 328 aa11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 SELENOPP49908 381 aa11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 ZP1P60852 638 aa11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 EMX2Q04743 252 aa11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 UBXN2BQ14CS0 331 aa11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 TEAD2Q15562 447 aa11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 FAM69AQ5T7M9 428 aa11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 ACSM5Q6NUN0 579 aa11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 STOML3Q8TAV4 291 aa11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 C22orf15Q8WYQ4 148 aa11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 TAPBPLQ9BX59 468 aa11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 SLC46A2Q9BY10 475 aa11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 POLDIP3Q9BY77 421 aaKnown RBP11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 TSPAN10Q9H1Z9 355 aaPredicted RBP11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 GPR83Q9NYM4 423 aa11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 SLC9A8Q9Y2E8 581 aa11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 COL6A3P12111 3177 aa11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 TMEM72A0PK05 275 aa11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 MATN4O95460 622 aa11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 CD3GP09693 182 aa11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 TACR2P21452 398 aa11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 OR1E1P30953 314 aa11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 SDC2P34741 201 aa11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 SURF2Q15527 256 aaPredicted RBP11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 PAGE3Q5JUK9 113 aa11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 ZNF678Q5SXM1 525 aa11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 HECTD2Q5U5R9 776 aa11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 UQCC3Q6UW78 93 aa11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 CCDC117Q8IWD4 279 aaPredicted RBP11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 CDK20Q8IZL9 346 aa11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 CLDN22Q8N7P3 220 aa11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 OR8J2Q8NGG1 315 aa11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 OR13C3Q8NGS6 347 aa11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 C9orf43Q8TAL5 461 aaPredicted RBP11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 ACOT11Q8WXI4 607 aaPredicted RBP11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 RAB24Q969Q5 203 aa11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 BARD1Q99728 777 aaKnown RBP11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 SPATA5L1Q9BVQ7 753 aa11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 EGLN1Q9GZT9 426 aa11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 EXOSC3Q9NQT5 275 aaKnown RBP11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 CFAP97Q9P2B7 532 aa11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 CLEC4EQ9ULY5 219 aa11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 POFUT2Q9Y2G5 429 aa11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 CHST2Q9Y4C5 530 aa11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 DNAJC15Q9Y5T4 150 aa11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 COL4A4P53420 1690 aaPredicted RBP11.14□□□□□ -0.63
CDK5RAP3-232ENST00000584168 A0A1W2PRB8 838 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 CCL22O00626 93 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms