RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 CNOT4O95628 575 aaKnown RBP7.06□□□□□ -1.28
PPP4R1-225ENST00000583438 KLK1P06870 262 aa7.06□□□□□ -1.28
PPP4R1-225ENST00000583438 SBK3P0C264 359 aa7.06□□□□□ -1.28
PPP4R1-225ENST00000583438 CT45A8P0DMV1 189 aa7.06□□□□□ -1.28
PPP4R1-225ENST00000583438 CT45A9P0DMV2 189 aa7.06□□□□□ -1.28
PPP4R1-225ENST00000583438 CYP4B1P13584 511 aa7.06□□□□□ -1.28
PPP4R1-225ENST00000583438 CHN1P15882 459 aa7.06□□□□□ -1.28
PPP4R1-225ENST00000583438 STMN1P16949 149 aa7.06□□□□□ -1.28
PPP4R1-225ENST00000583438 UGT2B10P36537 528 aa7.06□□□□□ -1.28
PPP4R1-225ENST00000583438 FEN1P39748 380 aaKnown RBP7.06□□□□□ -1.28
PPP4R1-225ENST00000583438 GP5P40197 560 aa7.06□□□□□ -1.28
PPP4R1-225ENST00000583438 PEX19P40855 299 aa7.06□□□□□ -1.28
PPP4R1-225ENST00000583438 BUD31P41223 144 aaPredicted RBP7.06□□□□□ -1.28
PPP4R1-225ENST00000583438 SLC6A8P48029 635 aa7.06□□□□□ -1.28
PPP4R1-225ENST00000583438 RAP1GDS1P52306 607 aa7.06□□□□□ -1.28
PPP4R1-225ENST00000583438 CLDN20P56880 219 aa7.06□□□□□ -1.28
PPP4R1-225ENST00000583438 ATP6V0D1P61421 351 aa7.06□□□□□ -1.28
PPP4R1-225ENST00000583438 SIRPAP78324 504 aa7.06□□□□□ -1.28
PPP4R1-225ENST00000583438 DR1Q01658 176 aa7.06□□□□□ -1.28
PPP4R1-225ENST00000583438 TGM3Q08188 693 aa7.06□□□□□ -1.28
PPP4R1-225ENST00000583438 ZNF844Q08AG5 666 aa7.06□□□□□ -1.28
PPP4R1-225ENST00000583438 TBL3Q12788 808 aaKnown RBP7.06□□□□□ -1.28
PPP4R1-225ENST00000583438 RCN2Q14257 317 aa7.06□□□□□ -1.28
PPP4R1-225ENST00000583438 ACKR1Q16570 336 aa7.06□□□□□ -1.28
PPP4R1-225ENST00000583438 PFKFB4Q16877 469 aa7.06□□□□□ -1.28
PPP4R1-225ENST00000583438 CT45A2Q5DJT8 189 aa7.06□□□□□ -1.28
PPP4R1-225ENST00000583438 PAGE2BQ5JRK9 111 aa7.06□□□□□ -1.28
PPP4R1-225ENST00000583438 ZDHHC24Q6UX98 284 aa7.06□□□□□ -1.28
PPP4R1-225ENST00000583438 DND1Q8IYX4 353 aaKnown RBP7.06□□□□□ -1.28
PPP4R1-225ENST00000583438 CDYL2Q8N8U2 506 aa7.06□□□□□ -1.28
PPP4R1-225ENST00000583438 SRFBP1Q8NEF9 429 aaKnown RBP7.06□□□□□ -1.28
PPP4R1-225ENST00000583438 TMBIM1Q969X1 311 aa7.06□□□□□ -1.28
PPP4R1-225ENST00000583438 ZC3HAV1LQ96H79 300 aaKnown RBP7.06□□□□□ -1.28
PPP4R1-225ENST00000583438 LCORQ96JN0 433 aaPredicted RBP7.06□□□□□ -1.28
PPP4R1-225ENST00000583438 ART5Q96L15 291 aa7.06□□□□□ -1.28
PPP4R1-225ENST00000583438 SECISBP2Q96T21 854 aaKnown RBP7.06□□□□□ -1.28
PPP4R1-225ENST00000583438 CCL19Q99731 98 aa7.06□□□□□ -1.28
PPP4R1-225ENST00000583438 PIP5K1AQ99755 562 aa7.06□□□□□ -1.28
PPP4R1-225ENST00000583438 CAPS2Q9BXY5 557 aa7.06□□□□□ -1.28
PPP4R1-225ENST00000583438 METTL7AQ9H8H3 244 aa7.06□□□□□ -1.28
PPP4R1-225ENST00000583438 BARX1Q9HBU1 254 aaPredicted RBP7.06□□□□□ -1.28
PPP4R1-225ENST00000583438 SAYSD1Q9NPB0 183 aa7.06□□□□□ -1.28
PPP4R1-225ENST00000583438 LYARQ9NX58 379 aaKnown RBP7.06□□□□□ -1.28
PPP4R1-225ENST00000583438 PACSIN3Q9UKS6 424 aa7.06□□□□□ -1.28
PPP4R1-225ENST00000583438 NUP214P35658 2090 aaPredicted RBP7.05□□□□□ -1.28
PPP4R1-225ENST00000583438 A0A096LNT2 108 aa7.05□□□□□ -1.28
PPP4R1-225ENST00000583438 GOLGA6L10A0A0M3HER8 536 aa7.05□□□□□ -1.28
PPP4R1-225ENST00000583438 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.05□□□□□ -1.28
PPP4R1-225ENST00000583438 TP53I11O14683 189 aa7.05□□□□□ -1.28
PPP4R1-225ENST00000583438 NDUFS7O75251 213 aa7.05□□□□□ -1.28
PPP4R1-225ENST00000583438 ERAL1O75616 437 aaKnown RBP7.05□□□□□ -1.28
PPP4R1-225ENST00000583438 ACTL6AO96019 429 aa7.05□□□□□ -1.28
PPP4R1-225ENST00000583438 ALDOAP04075 364 aaKnown RBP7.05□□□□□ -1.28
PPP4R1-225ENST00000583438 TSPAN8P19075 237 aa7.05□□□□□ -1.28
PPP4R1-225ENST00000583438 NT5EP21589 574 aa7.05□□□□□ -1.28
PPP4R1-225ENST00000583438 CPA2P48052 419 aa7.05□□□□□ -1.28
PPP4R1-225ENST00000583438 MTNR1BP49286 362 aa7.05□□□□□ -1.28
PPP4R1-225ENST00000583438 XKP51811 444 aa7.05□□□□□ -1.28
PPP4R1-225ENST00000583438 RAE1P78406 368 aaKnown RBP7.05□□□□□ -1.28
PPP4R1-225ENST00000583438 TNK1Q13470 666 aa7.05□□□□□ -1.28
PPP4R1-225ENST00000583438 CUL3Q13618 768 aa7.05□□□□□ -1.28
PPP4R1-225ENST00000583438 GTF2H2Q13888 395 aa7.05□□□□□ -1.28
PPP4R1-225ENST00000583438 SLMAPQ14BN4 828 aa7.05□□□□□ -1.28
PPP4R1-225ENST00000583438 HIST2H2ACQ16777 129 aaPredicted RBP7.05□□□□□ -1.28
PPP4R1-225ENST00000583438 ZNF628Q5EBL2 1059 aa7.05□□□□□ -1.28
PPP4R1-225ENST00000583438 TECRLQ5HYJ1 363 aa7.05□□□□□ -1.28
PPP4R1-225ENST00000583438 HIST2H2AA3Q6FI13 130 aa7.05□□□□□ -1.28
PPP4R1-225ENST00000583438 SLC48A1Q6P1K1 146 aa7.05□□□□□ -1.28
PPP4R1-225ENST00000583438 GTF2H2CQ6P1K8 395 aa7.05□□□□□ -1.28
PPP4R1-225ENST00000583438 PRSS57Q6UWY2 283 aa7.05□□□□□ -1.28
PPP4R1-225ENST00000583438 LCNL1Q6ZST4 164 aa7.05□□□□□ -1.28
PPP4R1-225ENST00000583438 COMMD6Q7Z4G1 85 aa7.05□□□□□ -1.28
PPP4R1-225ENST00000583438 NUDT13Q86X67 352 aa7.05□□□□□ -1.28
PPP4R1-225ENST00000583438 MYLK4Q86YV6 388 aaPredicted RBP7.05□□□□□ -1.28
PPP4R1-225ENST00000583438 UBQLNLQ8IYU4 475 aa7.05□□□□□ -1.28
PPP4R1-225ENST00000583438 TAGAPQ8N103 731 aa7.05□□□□□ -1.28
PPP4R1-225ENST00000583438 FADS6Q8N9I5 356 aa7.05□□□□□ -1.28
PPP4R1-225ENST00000583438 C17orf47Q8NEP4 570 aa7.05□□□□□ -1.28
PPP4R1-225ENST00000583438 OR52R1Q8NGF1 315 aa7.05□□□□□ -1.28
PPP4R1-225ENST00000583438 OR14L1PQ8NHC6 308 aa7.05□□□□□ -1.28
PPP4R1-225ENST00000583438 SPATA3Q8NHX4 192 aa7.05□□□□□ -1.28
PPP4R1-225ENST00000583438 FNDC9Q8TBE3 224 aa7.05□□□□□ -1.28
PPP4R1-225ENST00000583438 NEUROG1Q92886 237 aa7.05□□□□□ -1.28
PPP4R1-225ENST00000583438 TM4SF18Q96CE8 201 aa7.05□□□□□ -1.28
PPP4R1-225ENST00000583438 RAX2Q96IS3 184 aa7.05□□□□□ -1.28
PPP4R1-225ENST00000583438 NAP1L3Q99457 506 aaPredicted RBP7.05□□□□□ -1.28
PPP4R1-225ENST00000583438 CPNE1Q99829 537 aa7.05□□□□□ -1.28
PPP4R1-225ENST00000583438 KRTAP4-8Q9BYQ9 185 aa7.05□□□□□ -1.28
PPP4R1-225ENST00000583438 DPH5Q9H2P9 285 aa7.05□□□□□ -1.28
PPP4R1-225ENST00000583438 ZNF701Q9NV72 531 aaPredicted RBP7.05□□□□□ -1.28
PPP4R1-225ENST00000583438 MS4A12Q9NXJ0 267 aa7.05□□□□□ -1.28
PPP4R1-225ENST00000583438 TAS2R10Q9NYW0 307 aa7.05□□□□□ -1.28
PPP4R1-225ENST00000583438 PCTPQ9UKL6 214 aa7.05□□□□□ -1.28
PPP4R1-225ENST00000583438 SPACA6W5XKT8 324 aa7.05□□□□□ -1.28
PPP4R1-225ENST00000583438 ARFGEF3Q5TH69 2177 aa7.05□□□□□ -1.28
PPP4R1-225ENST00000583438 TENM1Q9UKZ4 2725 aa7.04□□□□□ -1.28
PPP4R1-225ENST00000583438 EFCAB8A8MWE9 144 aa7.04□□□□□ -1.28
PPP4R1-225ENST00000583438 FOXE1O00358 373 aaPredicted RBP7.04□□□□□ -1.28
PPP4R1-225ENST00000583438 TO15178 435 aa7.04□□□□□ -1.28
PPP4R1-225ENST00000583438 RAD51CO43502 376 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms