RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 OMPP47874 163 aa21.01■□□□□ 0.95
CCDC47-204ENST00000582252 ZNF136P52737 540 aa21.01■□□□□ 0.95
CCDC47-204ENST00000582252 HSD11B2P80365 405 aa21.01■□□□□ 0.95
CCDC47-204ENST00000582252 MAT1AQ00266 395 aaKnown RBP21.01■□□□□ 0.95
CCDC47-204ENST00000582252 COL9A2Q14055 689 aaPredicted RBP21.01■□□□□ 0.95
CCDC47-204ENST00000582252 NKAIN2Q5VXU1 208 aa21.01■□□□□ 0.95
CCDC47-204ENST00000582252 PLAG1Q6DJT9 500 aa21.01■□□□□ 0.95
CCDC47-204ENST00000582252 DGAT2L6Q6ZPD8 337 aa21.01■□□□□ 0.95
CCDC47-204ENST00000582252 SHISA5Q8N114 240 aa21.01■□□□□ 0.95
CCDC47-204ENST00000582252 FAM26EQ8N5C1 309 aa21.01■□□□□ 0.95
CCDC47-204ENST00000582252 TCEANCQ8N8B7 351 aa21.01■□□□□ 0.95
CCDC47-204ENST00000582252 OR51Q1Q8NH59 317 aa21.01■□□□□ 0.95
CCDC47-204ENST00000582252 OSTF1Q92882 214 aa21.01■□□□□ 0.95
CCDC47-204ENST00000582252 SLC38A2Q96QD8 506 aa21.01■□□□□ 0.95
CCDC47-204ENST00000582252 ENAMQ9NRM1 1142 aa21.01■□□□□ 0.95
CCDC47-204ENST00000582252 SELENONQ9NZV5 590 aa21.01■□□□□ 0.95
CCDC47-204ENST00000582252 KLHL3Q9UH77 587 aa21.01■□□□□ 0.95
CCDC47-204ENST00000582252 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP21.01■□□□□ 0.95
CCDC47-204ENST00000582252 GXYLT2A0PJZ3 443 aa21.01■□□□□ 0.95
CCDC47-204ENST00000582252 ADORA3P0DMS8 318 aa21.01■□□□□ 0.95
CCDC47-204ENST00000582252 HOXC5Q00444 222 aa21.01■□□□□ 0.95
CCDC47-204ENST00000582252 MAPK14Q16539 360 aa21.01■□□□□ 0.95
CCDC47-204ENST00000582252 NKAIN4Q8IVV8 208 aa21.01■□□□□ 0.95
CCDC47-204ENST00000582252 SLC35F3Q8IY50 421 aa21.01■□□□□ 0.95
CCDC47-204ENST00000582252 CYP4Z2PQ8N1L4 340 aa21.01■□□□□ 0.95
CCDC47-204ENST00000582252 SPRTNQ9H040 489 aaPredicted RBP21.01■□□□□ 0.95
CCDC47-204ENST00000582252 RACGAP1Q9H0H5 632 aa21.01■□□□□ 0.95
CCDC47-204ENST00000582252 ARRDC1-AS1Q9H2J1 176 aa21.01■□□□□ 0.95
CCDC47-204ENST00000582252 Q9N2J8 555 aa21.01■□□□□ 0.95
CCDC47-204ENST00000582252 GMEB2Q9UKD1 530 aa21.01■□□□□ 0.95
CCDC47-204ENST00000582252 SLC7A7Q9UM01 511 aa21.01■□□□□ 0.95
CCDC47-204ENST00000582252 IRGMA1A4Y4 181 aa21■□□□□ 0.95
CCDC47-204ENST00000582252 CDC123O75794 336 aaPredicted RBP21■□□□□ 0.95
CCDC47-204ENST00000582252 OR2B3O76000 313 aa21■□□□□ 0.95
CCDC47-204ENST00000582252 CD1CP29017 333 aa21■□□□□ 0.95
CCDC47-204ENST00000582252 EMDP50402 254 aa21■□□□□ 0.95
CCDC47-204ENST00000582252 PSMD4P55036 377 aaKnown RBP21■□□□□ 0.95
CCDC47-204ENST00000582252 OR1D5P58170 312 aa21■□□□□ 0.95
CCDC47-204ENST00000582252 AQP6Q13520 282 aa21■□□□□ 0.95
CCDC47-204ENST00000582252 SPCS2Q15005 226 aa21■□□□□ 0.95
CCDC47-204ENST00000582252 NCF4Q15080 339 aa21■□□□□ 0.95
CCDC47-204ENST00000582252 GATAD2AQ86YP4 633 aa21■□□□□ 0.95
CCDC47-204ENST00000582252 RNF113BQ8IZP6 322 aaKnown RBP21■□□□□ 0.95
CCDC47-204ENST00000582252 OR4C6Q8NH72 309 aa21■□□□□ 0.95
CCDC47-204ENST00000582252 TBC1D15Q8TC07 691 aa21■□□□□ 0.95
CCDC47-204ENST00000582252 FAM46AQ96IP4 442 aaKnown RBP21■□□□□ 0.95
CCDC47-204ENST00000582252 GPA33Q99795 319 aa21■□□□□ 0.95
CCDC47-204ENST00000582252 ZNF559Q9BR84 538 aa21■□□□□ 0.95
CCDC47-204ENST00000582252 G6PC3Q9BUM1 346 aa21■□□□□ 0.95
CCDC47-204ENST00000582252 PLGRKTQ9HBL7 147 aa21■□□□□ 0.95
CCDC47-204ENST00000582252 CUTCQ9NTM9 273 aa21■□□□□ 0.95
CCDC47-204ENST00000582252 DNAJC27Q9NZQ0 273 aa21■□□□□ 0.95
CCDC47-204ENST00000582252 MMACHCQ9Y4U1 282 aa21■□□□□ 0.95
CCDC47-204ENST00000582252 TMX2-CTNND1H3BSU7 103 aa20.99■□□□□ 0.95
CCDC47-204ENST00000582252 M0R3G1 203 aa20.99■□□□□ 0.95
CCDC47-204ENST00000582252 PEX12O00623 359 aa20.99■□□□□ 0.95
CCDC47-204ENST00000582252 CLPXO76031 633 aa20.99■□□□□ 0.95
CCDC47-204ENST00000582252 SERPINB10P48595 397 aa20.99■□□□□ 0.95
CCDC47-204ENST00000582252 PSG6Q00889 435 aa20.99■□□□□ 0.95
CCDC47-204ENST00000582252 ZNF267Q14586 743 aaPredicted RBP20.99■□□□□ 0.95
CCDC47-204ENST00000582252 SNAPC1Q16533 368 aa20.99■□□□□ 0.95
CCDC47-204ENST00000582252 KMT5CQ86Y97 462 aa20.99■□□□□ 0.95
CCDC47-204ENST00000582252 CROCCP3Q8IVE0 287 aa20.99■□□□□ 0.95
CCDC47-204ENST00000582252 IQCF1Q8N6M8 205 aa20.99■□□□□ 0.95
CCDC47-204ENST00000582252 VSTM2LQ96N03 204 aa20.99■□□□□ 0.95
CCDC47-204ENST00000582252 PRODH2Q9UF12 536 aa20.99■□□□□ 0.95
CCDC47-204ENST00000582252 TGFBR3LH3BV60 316 aa20.98■□□□□ 0.95
CCDC47-204ENST00000582252 KHNYNO15037 678 aaKnown RBP20.98■□□□□ 0.95
CCDC47-204ENST00000582252 IFNA16P05015 189 aa20.98■□□□□ 0.95
CCDC47-204ENST00000582252 NR4A1P22736 598 aa20.98■□□□□ 0.95
CCDC47-204ENST00000582252 TGFBR2P37173 567 aa20.98■□□□□ 0.95
CCDC47-204ENST00000582252 OR1Q1Q15612 314 aa20.98■□□□□ 0.95
CCDC47-204ENST00000582252 MOGQ16653 247 aa20.98■□□□□ 0.95
CCDC47-204ENST00000582252 SYT16Q17RD7 645 aa20.98■□□□□ 0.95
CCDC47-204ENST00000582252 TMEM44Q2T9K0 475 aa20.98■□□□□ 0.95
CCDC47-204ENST00000582252 MRGPREQ86SM8 312 aa20.98■□□□□ 0.95
CCDC47-204ENST00000582252 KIF18BQ86Y91 864 aa20.98■□□□□ 0.95
CCDC47-204ENST00000582252 GRAMD2AQ8IUY3 354 aa20.98■□□□□ 0.95
CCDC47-204ENST00000582252 CLDN22Q8N7P3 220 aa20.98■□□□□ 0.95
CCDC47-204ENST00000582252 SLC35B4Q969S0 331 aa20.98■□□□□ 0.95
CCDC47-204ENST00000582252 TMEM80Q96HE8 168 aa20.98■□□□□ 0.95
CCDC47-204ENST00000582252 OR1F2PQ96R84 312 aa20.98■□□□□ 0.95
CCDC47-204ENST00000582252 TSSK6Q9BXA6 273 aa20.98■□□□□ 0.95
CCDC47-204ENST00000582252 TMEM27Q9HBJ8 222 aa20.98■□□□□ 0.95
CCDC47-204ENST00000582252 ST6GALNAC1Q9NSC7 600 aaPredicted RBP20.98■□□□□ 0.95
CCDC47-204ENST00000582252 FBXO34Q9NWN3 711 aa20.98■□□□□ 0.95
CCDC47-204ENST00000582252 CNIH4Q9P003 139 aa20.98■□□□□ 0.95
CCDC47-204ENST00000582252 NTNG1Q9Y2I2 539 aa20.98■□□□□ 0.95
CCDC47-204ENST00000582252 MN1Q10571 1320 aaPredicted RBP20.98■□□□□ 0.95
CCDC47-204ENST00000582252 CENPVL1A0A0U1RR11 272 aa20.98■□□□□ 0.95
CCDC47-204ENST00000582252 TMEM150CB9EJG8 249 aa20.98■□□□□ 0.95
CCDC47-204ENST00000582252 TLX2O43763 284 aaPredicted RBP20.98■□□□□ 0.95
CCDC47-204ENST00000582252 CSTF2P33240 577 aaKnown RBP eCLIP20.98■□□□□ 0.95
CCDC47-204ENST00000582252 BTG2P78543 158 aa20.98■□□□□ 0.95
CCDC47-204ENST00000582252 FUT7Q11130 342 aa20.98■□□□□ 0.95
CCDC47-204ENST00000582252 ERV3-1Q14264 604 aa20.98■□□□□ 0.95
CCDC47-204ENST00000582252 RNLSQ5VYX0 342 aa20.98■□□□□ 0.95
CCDC47-204ENST00000582252 NRMQ8IXM6 262 aa20.98■□□□□ 0.95
CCDC47-204ENST00000582252 CNPPD1Q9BV87 410 aa20.98■□□□□ 0.95
CCDC47-204ENST00000582252 GTPBP2Q9BX10 602 aaKnown RBP20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms