RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 SH2D4BQ5SQS7 431 aa13.05□□□□□ -0.32
SMARCE1-216ENST00000580419 AP1ARQ63HQ0 302 aa13.05□□□□□ -0.32
SMARCE1-216ENST00000580419 FAM214BQ7L5A3 538 aa13.05□□□□□ -0.32
SMARCE1-216ENST00000580419 MARCH3Q86UD3 253 aa13.05□□□□□ -0.32
SMARCE1-216ENST00000580419 GGNQ86UU5 652 aa13.05□□□□□ -0.32
SMARCE1-216ENST00000580419 GSPT2Q8IYD1 628 aaKnown RBP13.05□□□□□ -0.32
SMARCE1-216ENST00000580419 LRRC34Q8IZ02 419 aa13.05□□□□□ -0.32
SMARCE1-216ENST00000580419 GCNT2Q8N0V5 402 aa13.05□□□□□ -0.32
SMARCE1-216ENST00000580419 C4orf33Q8N1A6 199 aa13.05□□□□□ -0.32
SMARCE1-216ENST00000580419 LINC01560Q8TB33 94 aa13.05□□□□□ -0.32
SMARCE1-216ENST00000580419 GPR151Q8TDV0 419 aa13.05□□□□□ -0.32
SMARCE1-216ENST00000580419 TWIST2Q8WVJ9 160 aa13.05□□□□□ -0.32
SMARCE1-216ENST00000580419 NRGNQ92686 78 aa13.05□□□□□ -0.32
SMARCE1-216ENST00000580419 COQ8BQ96D53 544 aa13.05□□□□□ -0.32
SMARCE1-216ENST00000580419 PRPF18Q99633 342 aaKnown RBP13.05□□□□□ -0.32
SMARCE1-216ENST00000580419 BTBD2Q9BX70 525 aa13.05□□□□□ -0.32
SMARCE1-216ENST00000580419 HOXD1Q9GZZ0 328 aa13.05□□□□□ -0.32
SMARCE1-216ENST00000580419 PIGUQ9H490 435 aa13.05□□□□□ -0.32
SMARCE1-216ENST00000580419 GP6Q9HCN6 339 aa13.05□□□□□ -0.32
SMARCE1-216ENST00000580419 FANCFQ9NPI8 374 aa13.05□□□□□ -0.32
SMARCE1-216ENST00000580419 DLL4Q9NR61 685 aa13.05□□□□□ -0.32
SMARCE1-216ENST00000580419 PLSCR4Q9NRQ2 329 aa13.05□□□□□ -0.32
SMARCE1-216ENST00000580419 ASIC5Q9NY37 505 aa13.05□□□□□ -0.32
SMARCE1-216ENST00000580419 ZNF226Q9NYT6 803 aa13.05□□□□□ -0.32
SMARCE1-216ENST00000580419 SH3BP4Q9P0V3 963 aa13.05□□□□□ -0.32
SMARCE1-216ENST00000580419 RPH3AQ9Y2J0 694 aaPredicted RBP13.05□□□□□ -0.32
SMARCE1-216ENST00000580419 ACTL7BQ9Y614 415 aa13.05□□□□□ -0.32
SMARCE1-216ENST00000580419 ABCA2Q9BZC7 2435 aa13.05□□□□□ -0.32
SMARCE1-216ENST00000580419 DSCAMO60469 2012 aa13.05□□□□□ -0.32
SMARCE1-216ENST00000580419 SCAMP2O15127 329 aaKnown RBP13.04□□□□□ -0.32
SMARCE1-216ENST00000580419 CTIFO43310 598 aaKnown RBP13.04□□□□□ -0.32
SMARCE1-216ENST00000580419 IGKV1D-16P01601 117 aa13.04□□□□□ -0.32
SMARCE1-216ENST00000580419 ALOX5P09917 674 aa13.04□□□□□ -0.32
SMARCE1-216ENST00000580419 LINC00032P0C843 101 aa13.04□□□□□ -0.32
SMARCE1-216ENST00000580419 KLK2P20151 261 aa13.04□□□□□ -0.32
SMARCE1-216ENST00000580419 PRPS1L1P21108 318 aa13.04□□□□□ -0.32
SMARCE1-216ENST00000580419 ELK4P28324 431 aa13.04□□□□□ -0.32
SMARCE1-216ENST00000580419 ALDH3A1P30838 453 aa13.04□□□□□ -0.32
SMARCE1-216ENST00000580419 AGFG1P52594 562 aaKnown RBP13.04□□□□□ -0.32
SMARCE1-216ENST00000580419 SUCLG1P53597 346 aaKnown RBP13.04□□□□□ -0.32
SMARCE1-216ENST00000580419 SUMO3P55854 103 aaPredicted RBP13.04□□□□□ -0.32
SMARCE1-216ENST00000580419 PPP2R2AP63151 447 aa13.04□□□□□ -0.32
SMARCE1-216ENST00000580419 RPL38P63173 70 aaKnown RBP13.04□□□□□ -0.32
SMARCE1-216ENST00000580419 MAD2L1Q13257 205 aaPredicted RBP13.04□□□□□ -0.32
SMARCE1-216ENST00000580419 SNTB1Q13884 538 aaKnown RBP13.04□□□□□ -0.32
SMARCE1-216ENST00000580419 LSM12Q3MHD2 195 aaKnown RBP13.04□□□□□ -0.32
SMARCE1-216ENST00000580419 CPTPQ5TA50 214 aa13.04□□□□□ -0.32
SMARCE1-216ENST00000580419 WDR93Q6P2C0 686 aa13.04□□□□□ -0.32
SMARCE1-216ENST00000580419 ESPNLQ6ZVH7 1005 aa13.04□□□□□ -0.32
SMARCE1-216ENST00000580419 LUZP2Q86TE4 346 aa13.04□□□□□ -0.32
SMARCE1-216ENST00000580419 WDR75Q8IWA0 830 aaKnown RBP13.04□□□□□ -0.32
SMARCE1-216ENST00000580419 LRRC75A-AS1Q8N1F1 130 aa13.04□□□□□ -0.32
SMARCE1-216ENST00000580419 SLC16A11Q8NCK7 471 aa13.04□□□□□ -0.32
SMARCE1-216ENST00000580419 LRRN4CLQ8ND94 238 aa13.04□□□□□ -0.32
SMARCE1-216ENST00000580419 OR4C3Q8NH37 302 aa13.04□□□□□ -0.32
SMARCE1-216ENST00000580419 SFXN5Q8TD22 340 aa13.04□□□□□ -0.32
SMARCE1-216ENST00000580419 OR5P2Q8WZ92 322 aa13.04□□□□□ -0.32
SMARCE1-216ENST00000580419 CIDECQ96AQ7 238 aaPredicted RBP13.04□□□□□ -0.32
SMARCE1-216ENST00000580419 GMPPAQ96IJ6 420 aaPredicted RBP13.04□□□□□ -0.32
SMARCE1-216ENST00000580419 ADGRG7Q96K78 797 aa13.04□□□□□ -0.32
SMARCE1-216ENST00000580419 TSSK3Q96PN8 268 aa13.04□□□□□ -0.32
SMARCE1-216ENST00000580419 LIME1Q9H400 295 aa13.04□□□□□ -0.32
SMARCE1-216ENST00000580419 ANKZF1Q9H8Y5 726 aa13.04□□□□□ -0.32
SMARCE1-216ENST00000580419 SIRT3Q9NTG7 399 aaPredicted RBP13.04□□□□□ -0.32
SMARCE1-216ENST00000580419 FLRT3Q9NZU0 649 aa13.04□□□□□ -0.32
SMARCE1-216ENST00000580419 EIF3LQ9Y262 564 aaKnown RBP13.04□□□□□ -0.32
SMARCE1-216ENST00000580419 HEATR5AQ86XA9 2040 aa13.04□□□□□ -0.32
SMARCE1-216ENST00000580419 GXYLT2A0PJZ3 443 aa13.03□□□□□ -0.32
SMARCE1-216ENST00000580419 C16orf97H3BN30 126 aa13.03□□□□□ -0.32
SMARCE1-216ENST00000580419 CHRNGP07510 517 aa13.03□□□□□ -0.32
SMARCE1-216ENST00000580419 GUSBP08236 651 aa13.03□□□□□ -0.32
SMARCE1-216ENST00000580419 ACP2P11117 423 aa13.03□□□□□ -0.32
SMARCE1-216ENST00000580419 CRYGSP22914 178 aa13.03□□□□□ -0.32
SMARCE1-216ENST00000580419 HOXC12P31275 282 aa13.03□□□□□ -0.32
SMARCE1-216ENST00000580419 UGT2B10P36537 528 aa13.03□□□□□ -0.32
SMARCE1-216ENST00000580419 CLDN20P56880 219 aa13.03□□□□□ -0.32
SMARCE1-216ENST00000580419 KEAP1Q14145 624 aa13.03□□□□□ -0.32
SMARCE1-216ENST00000580419 DUSP5Q16690 384 aa13.03□□□□□ -0.32
SMARCE1-216ENST00000580419 ATP6AP1LQ52LC2 224 aa13.03□□□□□ -0.32
SMARCE1-216ENST00000580419 C6orf136Q5SQH8 315 aa13.03□□□□□ -0.32
SMARCE1-216ENST00000580419 SHEQ5VZ18 495 aa13.03□□□□□ -0.32
SMARCE1-216ENST00000580419 GTF2IRD2BQ6EKJ0 949 aa13.03□□□□□ -0.32
SMARCE1-216ENST00000580419 CDC73Q6P1J9 531 aa13.03□□□□□ -0.32
SMARCE1-216ENST00000580419 BHLHB9Q6PI77 547 aa13.03□□□□□ -0.32
SMARCE1-216ENST00000580419 ZNF474Q6S9Z5 364 aaPredicted RBP13.03□□□□□ -0.32
SMARCE1-216ENST00000580419 BTLAQ7Z6A9 289 aa13.03□□□□□ -0.32
SMARCE1-216ENST00000580419 GTF2IRD2Q86UP8 949 aa13.03□□□□□ -0.32
SMARCE1-216ENST00000580419 RIMKLAQ8IXN7 391 aa13.03□□□□□ -0.32
SMARCE1-216ENST00000580419 MREGQ8N565 214 aa13.03□□□□□ -0.32
SMARCE1-216ENST00000580419 ZNF527Q8NB42 609 aa13.03□□□□□ -0.32
SMARCE1-216ENST00000580419 OR56A1Q8NGH5 318 aa13.03□□□□□ -0.32
SMARCE1-216ENST00000580419 OR6K3Q8NGY3 331 aa13.03□□□□□ -0.32
SMARCE1-216ENST00000580419 FIG4Q92562 907 aa13.03□□□□□ -0.32
SMARCE1-216ENST00000580419 PIK3R3Q92569 461 aa13.03□□□□□ -0.32
SMARCE1-216ENST00000580419 FAM120BQ96EK7 910 aaKnown RBP13.03□□□□□ -0.32
SMARCE1-216ENST00000580419 PGM2Q96G03 612 aa13.03□□□□□ -0.32
SMARCE1-216ENST00000580419 ZNF845Q96IR2 970 aaPredicted RBP13.03□□□□□ -0.32
SMARCE1-216ENST00000580419 FAM111AQ96PZ2 611 aa13.03□□□□□ -0.32
SMARCE1-216ENST00000580419 PINK1Q9BXM7 581 aa13.03□□□□□ -0.32
SMARCE1-216ENST00000580419 BHLHE41Q9C0J9 482 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms