RNA–Protein interactions for RNA: ENST00000577524.5

ARHGAP28-208, Transcript of Rho GTPase activating protein 28, human

TSL 5

Gene ARHGAP28, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGAP28-208	ENST00000577524	ATG16L1	Q676U5	607 aa		4.91	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	GTF2IRD2B	Q6EKJ0	949 aa		4.91	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	MFSD12	Q6NUT3	480 aa		4.91	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	LUZP2	Q86TE4	346 aa		4.91	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	GTF2IRD2	Q86UP8	949 aa		4.91	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	LIX1L	Q8IVB5	337 aa		4.91	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	WDR75	Q8IWA0	830 aa	Known RBP	4.91	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	ZZZ3	Q8IYH5	903 aa		4.91	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	ZNF295-AS1	Q8N0V1	137 aa		4.91	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	TMCO5A	Q8N6Q1	288 aa		4.91	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	GOLGA6L1	Q8N7Z2	621 aa		4.91	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	C9orf106	Q8NAJ2	232 aa		4.91	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	GATS	Q8NAP1	163 aa		4.91	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	OR2M3	Q8NG83	312 aa		4.91	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	OR7A2P	Q8NGA2	310 aa		4.91	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	B4GALNT2	Q8NHY0	566 aa		4.91	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	4.91	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	PHOSPHO1	Q8TCT1	267 aa		4.91	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	FAM120B	Q96EK7	910 aa	Known RBP	4.91	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	C1GALT1C1	Q96EU7	318 aa		4.91	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	FCRL1	Q96LA6	429 aa		4.91	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	PPP1R36	Q96LQ0	422 aa		4.91	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	STAC	Q99469	402 aa		4.91	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	SLC39A3	Q9BRY0	314 aa		4.91	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	DUSP26	Q9BV47	211 aa		4.91	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	BTBD2	Q9BX70	525 aa		4.91	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	PINK1	Q9BXM7	581 aa		4.91	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	ACTRT3	Q9BYD9	372 aa		4.91	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	BHLHE41	Q9C0J9	482 aa	Predicted RBP	4.91	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	PIGU	Q9H490	435 aa		4.91	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	CACYBP	Q9HB71	228 aa	Known RBP	4.91	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	TIGAR	Q9NQ88	270 aa		4.91	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	EXD2	Q9NVH0	621 aa		4.91	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	PAQR5	Q9NXK6	330 aa	Predicted RBP	4.91	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	ZDHHC2	Q9UIJ5	367 aa		4.91	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	MCTS1	Q9ULC4	181 aa	Known RBP	4.91	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	VDAC3	Q9Y277	283 aa		4.91	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	EMC9	Q9Y3B6	208 aa		4.91	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	RAP2C	Q9Y3L5	183 aa		4.91	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	CCL27	Q9Y4X3	112 aa		4.91	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	ACTL7B	Q9Y614	415 aa		4.91	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	AP4B1	Q9Y6B7	739 aa		4.91	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	OR2M5	A3KFT3	312 aa		4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	TRPC5OS	A6NMA1	111 aa		4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	GJE1	A6NN92	205 aa		4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	ALG1L2	C9J202	215 aa		4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	SLCO1B7	G3V0H7	640 aa		4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	EIF1AY	O14602	144 aa	Known RBP	4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	HCRTR2	O43614	444 aa		4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	FADS1	O60427	444 aa		4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	ZIC3	O60481	467 aa		4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	TNFRSF21	O75509	655 aa		4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	CYP7B1	O75881	506 aa		4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	KCNK2	O95069	426 aa		4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	GOSR1	O95249	250 aa		4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	PSMG1	O95456	288 aa		4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	CPSF4	O95639	269 aa	Known RBP	4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	OXSR1	O95747	527 aa	Predicted RBP	4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	C6orf47	O95873	294 aa		4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	AK1	P00568	194 aa		4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	HMGN2	P05204	90 aa	Known RBP	4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	NGFR	P08138	427 aa		4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	PABPC4L	P0CB38	370 aa	Known RBP	4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	ACP2	P11117	423 aa		4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	LAMP1	P11279	417 aa		4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	G6PD	P11413	515 aa		4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	CREB1	P16220	341 aa		4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	ZNF708	P17019	499 aa		4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	IGFBP2	P18065	325 aa		4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	TBXA2R	P21731	343 aa		4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	BGN	P21810	368 aa		4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	DNASE1	P24855	282 aa		4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	S100A3	P33764	101 aa		4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	SOX18	P35713	384 aa		4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	CHI3L1	P36222	383 aa	Predicted RBP	4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	EIF1	P41567	113 aa	Known RBP	4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	FRK	P42685	505 aa	Predicted RBP	4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	EIF1AX	P47813	144 aa	Known RBP	4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	LHX2	P50458	406 aa		4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	CCR4	P51679	360 aa		4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	ZNF136	P52737	540 aa		4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	GFRA1	P56159	465 aa		4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	CLDN15	P56746	228 aa		4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	CLDN8	P56748	225 aa		4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	SIRPA	P78324	504 aa		4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	SORD	Q00796	357 aa		4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	TFF3	Q07654	80 aa		4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	SNTB1	Q13884	538 aa	Known RBP	4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	PTGR1	Q14914	329 aa		4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	DUSP5	Q16690	384 aa		4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	PRSS53	Q2L4Q9	553 aa		4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	DPY19L1	Q2PZI1	675 aa		4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	GRAMD1B	Q3KR37	738 aa		4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	UGT3A2	Q3SY77	523 aa		4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	ZNF385B	Q569K4	471 aa		4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	XKR7	Q5GH72	579 aa		4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	DCST1	Q5T197	706 aa		4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	DCST2	Q5T1A1	773 aa		4.9	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	NXN	Q6DKJ4	435 aa		4.9	□□□□□ -1.63

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