RNA–Protein interactions for RNA: ENST00000577483.1

SSH2-205, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,630 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-205ENST00000577483 ZFP3Q96NJ6 502 aa11.44□□□□□ -0.58
SSH2-205ENST00000577483 STACQ99469 402 aa11.44□□□□□ -0.58
SSH2-205ENST00000577483 DUSP26Q9BV47 211 aa11.44□□□□□ -0.58
SSH2-205ENST00000577483 PTGES2Q9H7Z7 377 aa11.44□□□□□ -0.58
SSH2-205ENST00000577483 AKTIPQ9H8T0 292 aa11.44□□□□□ -0.58
SSH2-205ENST00000577483 SLC24A3Q9HC58 644 aa11.44□□□□□ -0.58
SSH2-205ENST00000577483 ASIC5Q9NY37 505 aa11.44□□□□□ -0.58
SSH2-205ENST00000577483 NOP53Q9NZM5 478 aaKnown RBP11.44□□□□□ -0.58
SSH2-205ENST00000577483 HAO1Q9UJM8 370 aa11.44□□□□□ -0.58
SSH2-205ENST00000577483 ITGB1BP2Q9UKP3 347 aa11.44□□□□□ -0.58
SSH2-205ENST00000577483 EIF3LQ9Y262 564 aaKnown RBP11.44□□□□□ -0.58
SSH2-205ENST00000577483 VDAC3Q9Y277 283 aa11.44□□□□□ -0.58
SSH2-205ENST00000577483 ACTL7BQ9Y614 415 aa11.44□□□□□ -0.58
SSH2-205ENST00000577483 KCNE3Q9Y6H6 103 aa11.44□□□□□ -0.58
SSH2-205ENST00000577483 MED13LQ71F56 2210 aa11.44□□□□□ -0.58
SSH2-205ENST00000577483 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.43□□□□□ -0.58
SSH2-205ENST00000577483 SEC14L5O43304 696 aa11.43□□□□□ -0.58
SSH2-205ENST00000577483 NDUFB5O43674 189 aa11.43□□□□□ -0.58
SSH2-205ENST00000577483 CTAG2O75638 210 aa11.43□□□□□ -0.58
SSH2-205ENST00000577483 TNFSF13O75888 250 aa11.43□□□□□ -0.58
SSH2-205ENST00000577483 PEPDP12955 493 aa11.43□□□□□ -0.58
SSH2-205ENST00000577483 DDX5P17844 614 aaKnown RBP11.43□□□□□ -0.58
SSH2-205ENST00000577483 CCT3P49368 545 aaKnown RBP11.43□□□□□ -0.58
SSH2-205ENST00000577483 RPL14P50914 215 aaKnown RBP11.43□□□□□ -0.58
SSH2-205ENST00000577483 CLDN8P56748 225 aa11.43□□□□□ -0.58
SSH2-205ENST00000577483 HBA1P69905 142 aa11.43□□□□□ -0.58
SSH2-205ENST00000577483 POU6F2P78424 691 aaPredicted RBP11.43□□□□□ -0.58
SSH2-205ENST00000577483 CD226Q15762 336 aa11.43□□□□□ -0.58
SSH2-205ENST00000577483 FLYWCH1Q4VC44 716 aa11.43□□□□□ -0.58
SSH2-205ENST00000577483 CDC73Q6P1J9 531 aa11.43□□□□□ -0.58
SSH2-205ENST00000577483 CLECL1Q8IZS7 167 aa11.43□□□□□ -0.58
SSH2-205ENST00000577483 ZNF845Q96IR2 970 aaPredicted RBP11.43□□□□□ -0.58
SSH2-205ENST00000577483 SFXN3Q9BWM7 321 aa11.43□□□□□ -0.58
SSH2-205ENST00000577483 BTBD2Q9BX70 525 aa11.43□□□□□ -0.58
SSH2-205ENST00000577483 BHLHE41Q9C0J9 482 aaPredicted RBP11.43□□□□□ -0.58
SSH2-205ENST00000577483 PIGUQ9H490 435 aa11.43□□□□□ -0.58
SSH2-205ENST00000577483 KCNK9Q9NPC2 374 aa11.43□□□□□ -0.58
SSH2-205ENST00000577483 DUSP22Q9NRW4 184 aa11.43□□□□□ -0.58
SSH2-205ENST00000577483 ATAD3AQ9NVI7 634 aa11.43□□□□□ -0.58
SSH2-205ENST00000577483 NPIPA5A0A0B4J1W7 369 aa11.42□□□□□ -0.58
SSH2-205ENST00000577483 NPIPA7E9PJI5 369 aa11.42□□□□□ -0.58
SSH2-205ENST00000577483 NPIPA8P0DM63 369 aa11.42□□□□□ -0.58
SSH2-205ENST00000577483 WDR4P57081 412 aaKnown RBP11.42□□□□□ -0.58
SSH2-205ENST00000577483 BST1Q10588 318 aa11.42□□□□□ -0.58
SSH2-205ENST00000577483 MAD2L1Q13257 205 aaPredicted RBP11.42□□□□□ -0.58
SSH2-205ENST00000577483 OR4F3Q6IEY1 312 aa11.42□□□□□ -0.58
SSH2-205ENST00000577483 LUZP2Q86TE4 346 aa11.42□□□□□ -0.58
SSH2-205ENST00000577483 GGNQ86UU5 652 aa11.42□□□□□ -0.58
SSH2-205ENST00000577483 CLEC4FQ8N1N0 589 aa11.42□□□□□ -0.58
SSH2-205ENST00000577483 OR56A1Q8NGH5 318 aa11.42□□□□□ -0.58
SSH2-205ENST00000577483 SMPDL3BQ92485 455 aa11.42□□□□□ -0.58
SSH2-205ENST00000577483 FIG4Q92562 907 aa11.42□□□□□ -0.58
SSH2-205ENST00000577483 CHMP6Q96FZ7 201 aa11.42□□□□□ -0.58
SSH2-205ENST00000577483 PIGQQ9BRB3 760 aa11.42□□□□□ -0.58
SSH2-205ENST00000577483 GPATCH1Q9BRR8 931 aaKnown RBP11.42□□□□□ -0.58
SSH2-205ENST00000577483 PINK1Q9BXM7 581 aa11.42□□□□□ -0.58
SSH2-205ENST00000577483 ACTRT3Q9BYD9 372 aa11.42□□□□□ -0.58
SSH2-205ENST00000577483 NUF2Q9BZD4 464 aa11.42□□□□□ -0.58
SSH2-205ENST00000577483 SERHL2Q9H4I8 314 aa11.42□□□□□ -0.58
SSH2-205ENST00000577483 NEUROD4Q9HD90 331 aa11.42□□□□□ -0.58
SSH2-205ENST00000577483 PNPOQ9NVS9 261 aa11.42□□□□□ -0.58
SSH2-205ENST00000577483 GIN1Q9NXP7 522 aa11.42□□□□□ -0.58
SSH2-205ENST00000577483 GALNT8Q9NY28 637 aa11.42□□□□□ -0.58
SSH2-205ENST00000577483 FOXD3Q9UJU5 478 aaPredicted RBP11.42□□□□□ -0.58
SSH2-205ENST00000577483 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.42□□□□□ -0.58
SSH2-205ENST00000577483 TEP1Q99973 2627 aaKnown RBP11.42□□□□□ -0.58
SSH2-205ENST00000577483 AKAP6Q13023 2319 aa11.42□□□□□ -0.58
SSH2-205ENST00000577483 SPG11Q96JI7 2443 aa11.42□□□□□ -0.58
SSH2-205ENST00000577483 A0A1W2PNV4 684 aa11.42□□□□□ -0.58
SSH2-205ENST00000577483 FAM221AA4D161 298 aa11.42□□□□□ -0.58
SSH2-205ENST00000577483 SLC22A20A6NK97 555 aa11.42□□□□□ -0.58
SSH2-205ENST00000577483 ANKRD28O15084 1053 aa11.42□□□□□ -0.58
SSH2-205ENST00000577483 CFLARO15519 480 aa11.42□□□□□ -0.58
SSH2-205ENST00000577483 MYZAPP0CAP1 466 aa11.42□□□□□ -0.58
SSH2-205ENST00000577483 RNF144AP50876 292 aaPredicted RBP11.42□□□□□ -0.58
SSH2-205ENST00000577483 RPS26P62854 115 aaKnown RBP11.42□□□□□ -0.58
SSH2-205ENST00000577483 STX3Q13277 289 aa11.42□□□□□ -0.58
SSH2-205ENST00000577483 TESK1Q15569 626 aa11.42□□□□□ -0.58
SSH2-205ENST00000577483 SMU1Q2TAY7 513 aa11.42□□□□□ -0.58
SSH2-205ENST00000577483 PGS1Q32NB8 556 aa11.42□□□□□ -0.58
SSH2-205ENST00000577483 PLPPR5Q32ZL2 321 aa11.42□□□□□ -0.58
SSH2-205ENST00000577483 LSM12Q3MHD2 195 aaKnown RBP11.42□□□□□ -0.58
SSH2-205ENST00000577483 GLYR1Q49A26 553 aaPredicted RBP11.42□□□□□ -0.58
SSH2-205ENST00000577483 DCST2Q5T1A1 773 aa11.42□□□□□ -0.58
SSH2-205ENST00000577483 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.42□□□□□ -0.585e-6■□□□□ 9
SSH2-205ENST00000577483 VWA1Q6PCB0 445 aa11.42□□□□□ -0.58
SSH2-205ENST00000577483 PIP4P2Q8N4L2 257 aa11.42□□□□□ -0.58
SSH2-205ENST00000577483 MEIOBQ8N635 442 aa11.42□□□□□ -0.58
SSH2-205ENST00000577483 NATD1Q8N6N6 113 aa11.42□□□□□ -0.58
SSH2-205ENST00000577483 ANKRD42Q8N9B4 389 aa11.42□□□□□ -0.58
SSH2-205ENST00000577483 OR5D16Q8NGK9 328 aa11.42□□□□□ -0.58
SSH2-205ENST00000577483 GOT1L1Q8NHS2 421 aaPredicted RBP11.42□□□□□ -0.58
SSH2-205ENST00000577483 LINC01560Q8TB33 94 aa11.42□□□□□ -0.58
SSH2-205ENST00000577483 SFXN5Q8TD22 340 aa11.42□□□□□ -0.58
SSH2-205ENST00000577483 LRRC46Q96FV0 321 aa11.42□□□□□ -0.58
SSH2-205ENST00000577483 SH3YL1Q96HL8 342 aaPredicted RBP11.42□□□□□ -0.58
SSH2-205ENST00000577483 PRPF18Q99633 342 aaKnown RBP11.42□□□□□ -0.58
SSH2-205ENST00000577483 UBQLN4Q9NRR5 601 aa11.42□□□□□ -0.58
SSH2-205ENST00000577483 F8P00451 2351 aa11.41□□□□□ -0.58
SSH2-205ENST00000577483 A0A1W2PQD3 144 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms