RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 EEF1E1O43324 174 aaKnown RBP5.64□□□□□ -1.51
NUP88-212ENST00000576708 REM1O75628 298 aa5.64□□□□□ -1.51
NUP88-212ENST00000576708 ESRRBO95718 433 aa5.64□□□□□ -1.51
NUP88-212ENST00000576708 ATP1B1P05026 303 aa5.64□□□□□ -1.51
NUP88-212ENST00000576708 IL3P08700 152 aa5.64□□□□□ -1.51
NUP88-212ENST00000576708 TMIGD3P0DMS9 266 aaPredicted RBP5.64□□□□□ -1.51
NUP88-212ENST00000576708 CSNK2A2P19784 350 aaPredicted RBP5.64□□□□□ -1.51
NUP88-212ENST00000576708 KLK2P20151 261 aa5.64□□□□□ -1.51
NUP88-212ENST00000576708 CTSSP25774 331 aa5.64□□□□□ -1.51
NUP88-212ENST00000576708 GCAP28676 217 aa5.64□□□□□ -1.51
NUP88-212ENST00000576708 ECHS1P30084 290 aa5.64□□□□□ -1.51
NUP88-212ENST00000576708 TIMP3P35625 211 aa5.64□□□□□ -1.51
NUP88-212ENST00000576708 HSD17B3P37058 310 aa5.64□□□□□ -1.51
NUP88-212ENST00000576708 TMED10P49755 219 aaKnown RBP5.64□□□□□ -1.51
NUP88-212ENST00000576708 EMDP50402 254 aa5.64□□□□□ -1.51
NUP88-212ENST00000576708 SCAND1P57086 179 aa5.64□□□□□ -1.51
NUP88-212ENST00000576708 RAE1P78406 368 aaKnown RBP5.64□□□□□ -1.51
NUP88-212ENST00000576708 BTKQ06187 659 aa5.64□□□□□ -1.51
NUP88-212ENST00000576708 CKAP4Q07065 602 aaKnown RBP5.64□□□□□ -1.51
NUP88-212ENST00000576708 TOP3AQ13472 1001 aaPredicted RBP5.64□□□□□ -1.51
NUP88-212ENST00000576708 FBXL19-AS1Q494R0 122 aa5.64□□□□□ -1.51
NUP88-212ENST00000576708 GGTA1PQ4G0N0 100 aa5.64□□□□□ -1.51
NUP88-212ENST00000576708 FLYWCH1Q4VC44 716 aa5.64□□□□□ -1.51
NUP88-212ENST00000576708 CT83Q5H943 113 aa5.64□□□□□ -1.51
NUP88-212ENST00000576708 NHSL2Q5HYW2 709 aa5.64□□□□□ -1.51
NUP88-212ENST00000576708 C6orf163Q5TEZ5 329 aa5.64□□□□□ -1.51
NUP88-212ENST00000576708 NSUN5P2Q63ZY6 315 aa5.64□□□□□ -1.51
NUP88-212ENST00000576708 METTL2BQ6P1Q9 378 aaKnown RBP5.64□□□□□ -1.51
NUP88-212ENST00000576708 LARP4Q71RC2 724 aaKnown RBP eCLIP5.64□□□□□ -1.51
NUP88-212ENST00000576708 CXXC5Q7LFL8 322 aaKnown RBP5.64□□□□□ -1.51
NUP88-212ENST00000576708 PAGE2Q7Z2X7 111 aa5.64□□□□□ -1.51
NUP88-212ENST00000576708 NUP54Q7Z3B4 507 aa5.64□□□□□ -1.51
NUP88-212ENST00000576708 LUZP2Q86TE4 346 aa5.64□□□□□ -1.51
NUP88-212ENST00000576708 TGIF2LYQ8IUE0 185 aa5.64□□□□□ -1.51
NUP88-212ENST00000576708 PM20D2Q8IYS1 436 aa5.64□□□□□ -1.51
NUP88-212ENST00000576708 CDYL2Q8N8U2 506 aa5.64□□□□□ -1.51
NUP88-212ENST00000576708 WDSUB1Q8N9V3 476 aa5.64□□□□□ -1.51
NUP88-212ENST00000576708 OR4N2Q8NGD1 307 aa5.64□□□□□ -1.51
NUP88-212ENST00000576708 OR1J4Q8NGS1 313 aa5.64□□□□□ -1.51
NUP88-212ENST00000576708 OR9A2Q8NGT5 310 aa5.64□□□□□ -1.51
NUP88-212ENST00000576708 OR14L1PQ8NHC6 308 aa5.64□□□□□ -1.51
NUP88-212ENST00000576708 MBD3L2Q8NHZ7 208 aaPredicted RBP5.64□□□□□ -1.51
NUP88-212ENST00000576708 FAM222BQ8WU58 562 aa5.64□□□□□ -1.51
NUP88-212ENST00000576708 TMBIM1Q969X1 311 aa5.64□□□□□ -1.51
NUP88-212ENST00000576708 CTHRC1Q96CG8 243 aa5.64□□□□□ -1.51
NUP88-212ENST00000576708 HSPBAP1Q96EW2 488 aa5.64□□□□□ -1.51
NUP88-212ENST00000576708 RMND5BQ96G75 393 aaPredicted RBP5.64□□□□□ -1.51
NUP88-212ENST00000576708 KCNA7Q96RP8 456 aa5.64□□□□□ -1.51
NUP88-212ENST00000576708 SECISBP2Q96T21 854 aaKnown RBP5.64□□□□□ -1.51
NUP88-212ENST00000576708 FOXC2Q99958 501 aa5.64□□□□□ -1.51
NUP88-212ENST00000576708 MRPL57Q9BQC6 102 aaKnown RBP5.64□□□□□ -1.51
NUP88-212ENST00000576708 OSBPL11Q9BXB4 747 aa5.64□□□□□ -1.51
NUP88-212ENST00000576708 FUT8Q9BYC5 575 aa5.64□□□□□ -1.51
NUP88-212ENST00000576708 CXXC4Q9H2H0 198 aa5.64□□□□□ -1.51
NUP88-212ENST00000576708 MRPL46Q9H2W6 279 aaKnown RBP5.64□□□□□ -1.51
NUP88-212ENST00000576708 ZCCHC4Q9H5U6 513 aa5.64□□□□□ -1.51
NUP88-212ENST00000576708 BARX1Q9HBU1 254 aaPredicted RBP5.64□□□□□ -1.51
NUP88-212ENST00000576708 PFDN4Q9NQP4 134 aa5.64□□□□□ -1.51
NUP88-212ENST00000576708 C14orf119Q9NWQ9 140 aa5.64□□□□□ -1.51
NUP88-212ENST00000576708 KLRF1Q9NZS2 232 aa5.64□□□□□ -1.51
NUP88-212ENST00000576708 TMEM216Q9P0N5 145 aa5.64□□□□□ -1.51
NUP88-212ENST00000576708 MTRF1LQ9UGC7 380 aaKnown RBP5.64□□□□□ -1.51
NUP88-212ENST00000576708 FBXL2Q9UKC9 423 aa5.64□□□□□ -1.51
NUP88-212ENST00000576708 UTS2RQ9UKP6 389 aa5.64□□□□□ -1.51
NUP88-212ENST00000576708 PCDHGB3Q9Y5G1 929 aa5.64□□□□□ -1.51
NUP88-212ENST00000576708 IKBKGQ9Y6K9 419 aa5.64□□□□□ -1.51
NUP88-212ENST00000576708 FREM3P0C091 2139 aa5.63□□□□□ -1.51
NUP88-212ENST00000576708 PRRC2AP48634 2157 aaKnown RBP5.63□□□□□ -1.51
NUP88-212ENST00000576708 TUBAL3A6NHL2 446 aa5.63□□□□□ -1.51
NUP88-212ENST00000576708 GOLGA6L10A6NI86 522 aa5.63□□□□□ -1.51
NUP88-212ENST00000576708 CD8B2A6NJW9 211 aa5.63□□□□□ -1.51
NUP88-212ENST00000576708 CLCA1A8K7I4 914 aa5.63□□□□□ -1.51
NUP88-212ENST00000576708 H0Y3Z8 333 aa5.63□□□□□ -1.51
NUP88-212ENST00000576708 GOLGA8RI6L899 631 aa5.63□□□□□ -1.51
NUP88-212ENST00000576708 PCDH7O60245 1069 aa5.63□□□□□ -1.51
NUP88-212ENST00000576708 SUPT7LO94864 414 aa5.63□□□□□ -1.51
NUP88-212ENST00000576708 TGM6O95932 706 aa5.63□□□□□ -1.51
NUP88-212ENST00000576708 OTCP00480 354 aa5.63□□□□□ -1.51
NUP88-212ENST00000576708 CT45A8P0DMV1 189 aa5.63□□□□□ -1.51
NUP88-212ENST00000576708 CT45A9P0DMV2 189 aa5.63□□□□□ -1.51
NUP88-212ENST00000576708 CYP4B1P13584 511 aa5.63□□□□□ -1.51
NUP88-212ENST00000576708 NAGAP17050 411 aa5.63□□□□□ -1.51
NUP88-212ENST00000576708 DRD5P21918 477 aa5.63□□□□□ -1.51
NUP88-212ENST00000576708 DNASE1P24855 282 aa5.63□□□□□ -1.51
NUP88-212ENST00000576708 PPICP45877 212 aa5.63□□□□□ -1.51
NUP88-212ENST00000576708 SERPINB9P50453 376 aa5.63□□□□□ -1.51
NUP88-212ENST00000576708 DGKQP52824 942 aa5.63□□□□□ -1.51
NUP88-212ENST00000576708 MANFP55145 182 aaKnown RBP5.63□□□□□ -1.51
NUP88-212ENST00000576708 RPP38P78345 283 aaKnown RBP5.63□□□□□ -1.51
NUP88-212ENST00000576708 HMGCS1Q01581 520 aa5.63□□□□□ -1.51
NUP88-212ENST00000576708 DAZAP2Q15038 168 aaPredicted RBP5.63□□□□□ -1.51
NUP88-212ENST00000576708 CT45A2Q5DJT8 189 aa5.63□□□□□ -1.51
NUP88-212ENST00000576708 ZNF628Q5EBL2 1059 aa5.63□□□□□ -1.51
NUP88-212ENST00000576708 ZNF678Q5SXM1 525 aa5.63□□□□□ -1.51
NUP88-212ENST00000576708 SLC30A6Q6NXT4 461 aa5.63□□□□□ -1.51
NUP88-212ENST00000576708 NPSR1Q6W5P4 371 aa5.63□□□□□ -1.51
NUP88-212ENST00000576708 GCNT2Q8N0V5 402 aa5.63□□□□□ -1.51
NUP88-212ENST00000576708 BCL6BQ8N143 479 aaPredicted RBP5.63□□□□□ -1.51
NUP88-212ENST00000576708 KLHL36Q8N4N3 616 aa5.63□□□□□ -1.51
NUP88-212ENST00000576708 MMGT1Q8N4V1 131 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms