RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 TNFAIP8L3Q5GJ75 292 aa23.51■■□□□ 1.35
NPLOC4-215ENST00000574095 LUZP2Q86TE4 346 aa23.51■■□□□ 1.35
NPLOC4-215ENST00000574095 NATD1Q8N6N6 113 aa23.51■■□□□ 1.35
NPLOC4-215ENST00000574095 CDS1Q92903 461 aa23.51■■□□□ 1.35
NPLOC4-215ENST00000574095 PIGQQ9BRB3 760 aa23.51■■□□□ 1.35
NPLOC4-215ENST00000574095 DUSP26Q9BV47 211 aa23.51■■□□□ 1.35
NPLOC4-215ENST00000574095 BTBD2Q9BX70 525 aa23.51■■□□□ 1.35
NPLOC4-215ENST00000574095 DNAJB12Q9NXW2 375 aaKnown RBP23.51■■□□□ 1.35
NPLOC4-215ENST00000574095 VDAC3Q9Y277 283 aa23.51■■□□□ 1.35
NPLOC4-215ENST00000574095 BGNP21810 368 aa23.5■■□□□ 1.35
NPLOC4-215ENST00000574095 SLC1A6P48664 564 aa23.5■■□□□ 1.35
NPLOC4-215ENST00000574095 CLDN20P56880 219 aa23.5■■□□□ 1.35
NPLOC4-215ENST00000574095 MAD2L1Q13257 205 aaPredicted RBP23.5■■□□□ 1.35
NPLOC4-215ENST00000574095 TP53BP2Q13625 1128 aa23.5■■□□□ 1.35
NPLOC4-215ENST00000574095 LSM12Q3MHD2 195 aaKnown RBP23.5■■□□□ 1.35
NPLOC4-215ENST00000574095 GLYR1Q49A26 553 aaPredicted RBP23.5■■□□□ 1.35
NPLOC4-215ENST00000574095 GOT1L1Q8NHS2 421 aaPredicted RBP23.5■■□□□ 1.35
NPLOC4-215ENST00000574095 PSMA8Q8TAA3 256 aa23.5■■□□□ 1.35
NPLOC4-215ENST00000574095 LINC01560Q8TB33 94 aa23.5■■□□□ 1.35
NPLOC4-215ENST00000574095 FAM222BQ8WU58 562 aa23.5■■□□□ 1.35
NPLOC4-215ENST00000574095 SMPDL3BQ92485 455 aa23.5■■□□□ 1.35
NPLOC4-215ENST00000574095 STACQ99469 402 aa23.5■■□□□ 1.35
NPLOC4-215ENST00000574095 GPATCH1Q9BRR8 931 aaKnown RBP23.5■■□□□ 1.35
NPLOC4-215ENST00000574095 BHLHE41Q9C0J9 482 aaPredicted RBP23.5■■□□□ 1.35
NPLOC4-215ENST00000574095 PIGUQ9H490 435 aa23.5■■□□□ 1.35
NPLOC4-215ENST00000574095 AKTIPQ9H8T0 292 aa23.5■■□□□ 1.35
NPLOC4-215ENST00000574095 RAP2CQ9Y3L5 183 aa23.5■■□□□ 1.35
NPLOC4-215ENST00000574095 CCDC168Q8NDH2 2452 aa23.5■■□□□ 1.35
NPLOC4-215ENST00000574095 TUBAL3A6NHL2 446 aa23.49■■□□□ 1.35
NPLOC4-215ENST00000574095 SLC22A20A6NK97 555 aa23.49■■□□□ 1.35
NPLOC4-215ENST00000574095 LINC01387J3KSC0 135 aa23.49■■□□□ 1.35
NPLOC4-215ENST00000574095 CFLARO15519 480 aa23.49■■□□□ 1.35
NPLOC4-215ENST00000574095 NGFRP08138 427 aa23.49■■□□□ 1.35
NPLOC4-215ENST00000574095 HPGDP15428 266 aa23.49■■□□□ 1.35
NPLOC4-215ENST00000574095 CLDN8P56748 225 aa23.49■■□□□ 1.35
NPLOC4-215ENST00000574095 EEFSECP57772 596 aaKnown RBP23.49■■□□□ 1.35
NPLOC4-215ENST00000574095 PGS1Q32NB8 556 aa23.49■■□□□ 1.35
NPLOC4-215ENST00000574095 SPDYE7PQ495Y7 208 aa23.49■■□□□ 1.35
NPLOC4-215ENST00000574095 CDC73Q6P1J9 531 aa23.49■■□□□ 1.35
NPLOC4-215ENST00000574095 KIF18BQ86Y91 864 aa23.49■■□□□ 1.35
NPLOC4-215ENST00000574095 FIG4Q92562 907 aa23.49■■□□□ 1.35
NPLOC4-215ENST00000574095 SORT1Q99523 831 aa23.49■■□□□ 1.35
NPLOC4-215ENST00000574095 RBM24Q9BX46 236 aaKnown RBP23.49■■□□□ 1.35
NPLOC4-215ENST00000574095 POLDIP3Q9BY77 421 aaKnown RBP23.49■■□□□ 1.35
NPLOC4-215ENST00000574095 ACTRT3Q9BYD9 372 aa23.49■■□□□ 1.35
NPLOC4-215ENST00000574095 ACBD3Q9H3P7 528 aa23.49■■□□□ 1.35
NPLOC4-215ENST00000574095 UBQLN4Q9NRR5 601 aa23.49■■□□□ 1.35
NPLOC4-215ENST00000574095 DUSP22Q9NRW4 184 aa23.49■■□□□ 1.35
NPLOC4-215ENST00000574095 NOP53Q9NZM5 478 aaKnown RBP23.49■■□□□ 1.35
NPLOC4-215ENST00000574095 MYZAPP0CAP1 466 aa23.48■■□□□ 1.35
NPLOC4-215ENST00000574095 RPL14P50914 215 aaKnown RBP23.48■■□□□ 1.35
NPLOC4-215ENST00000574095 OR56A1Q8NGH5 318 aa23.48■■□□□ 1.35
NPLOC4-215ENST00000574095 OR5AK3PQ8NH89 298 aa23.48■■□□□ 1.35
NPLOC4-215ENST00000574095 ADAMTS15Q8TE58 950 aa23.48■■□□□ 1.35
NPLOC4-215ENST00000574095 SH3YL1Q96HL8 342 aaPredicted RBP23.48■■□□□ 1.35
NPLOC4-215ENST00000574095 PAIP2Q9BPZ3 127 aaKnown RBP23.48■■□□□ 1.35
NPLOC4-215ENST00000574095 PINK1Q9BXM7 581 aa23.48■■□□□ 1.35
NPLOC4-215ENST00000574095 GPATCH2Q9NW75 528 aa23.48■■□□□ 1.35
NPLOC4-215ENST00000574095 GIN1Q9NXP7 522 aa23.48■■□□□ 1.35
NPLOC4-215ENST00000574095 ASIC5Q9NY37 505 aa23.48■■□□□ 1.35
NPLOC4-215ENST00000574095 EPB41L3Q9Y2J2 1087 aaPredicted RBP23.48■■□□□ 1.35
NPLOC4-215ENST00000574095 KCNE3Q9Y6H6 103 aa23.48■■□□□ 1.35
NPLOC4-215ENST00000574095 SPG11Q96JI7 2443 aa23.47■■□□□ 1.35
NPLOC4-215ENST00000574095 TNFSF12-TNFSF13A0A0A6YY99 330 aa23.47■■□□□ 1.35
NPLOC4-215ENST00000574095 A0A1W2PNV4 684 aa23.47■■□□□ 1.35
NPLOC4-215ENST00000574095 SCDO00767 359 aa23.47■■□□□ 1.35
NPLOC4-215ENST00000574095 TNFSF13O75888 250 aa23.47■■□□□ 1.35
NPLOC4-215ENST00000574095 CPA2P48052 419 aa23.47■■□□□ 1.35
NPLOC4-215ENST00000574095 TMEM44Q2T9K0 475 aa23.47■■□□□ 1.35
NPLOC4-215ENST00000574095 SMU1Q2TAY7 513 aa23.47■■□□□ 1.35
NPLOC4-215ENST00000574095 ZNF845Q96IR2 970 aaPredicted RBP23.47■■□□□ 1.35
NPLOC4-215ENST00000574095 NPAS1Q99742 590 aa23.47■■□□□ 1.35
NPLOC4-215ENST00000574095 RASSF1Q9NS23 344 aa23.47■■□□□ 1.35
NPLOC4-215ENST00000574095 GALNT8Q9NY28 637 aa23.47■■□□□ 1.35
NPLOC4-215ENST00000574095 FAF1Q9UNN5 650 aaPredicted RBP23.47■■□□□ 1.35
NPLOC4-215ENST00000574095 ACTL7BQ9Y614 415 aa23.47■■□□□ 1.35
NPLOC4-215ENST00000574095 AP4B1Q9Y6B7 739 aa23.47■■□□□ 1.35
NPLOC4-215ENST00000574095 ANKHD1Q8IWZ3 2542 aaKnown RBP23.47■■□□□ 1.35
NPLOC4-215ENST00000574095 FAM221AA4D161 298 aa23.46■■□□□ 1.35
NPLOC4-215ENST00000574095 A6NNC1 897 aa23.46■■□□□ 1.35
NPLOC4-215ENST00000574095 TNFRSF21O75509 655 aa23.46■■□□□ 1.35
NPLOC4-215ENST00000574095 TUBBP07437 444 aa23.46■■□□□ 1.35
NPLOC4-215ENST00000574095 LCN1P31025 176 aa23.46■■□□□ 1.35
NPLOC4-215ENST00000574095 C21orf58P58505 322 aa23.46■■□□□ 1.35
NPLOC4-215ENST00000574095 HBA1P69905 142 aa23.46■■□□□ 1.35
NPLOC4-215ENST00000574095 STX3Q13277 289 aa23.46■■□□□ 1.35
NPLOC4-215ENST00000574095 TESK1Q15569 626 aa23.46■■□□□ 1.35
NPLOC4-215ENST00000574095 OR4F3Q6IEY1 312 aa23.46■■□□□ 1.35
NPLOC4-215ENST00000574095 CROCCP2Q86T23 111 aa23.46■■□□□ 1.35
NPLOC4-215ENST00000574095 CLECL1Q8IZS7 167 aa23.46■■□□□ 1.35
NPLOC4-215ENST00000574095 CNEP1R1Q8N9A8 125 aa23.46■■□□□ 1.35
NPLOC4-215ENST00000574095 SFXN5Q8TD22 340 aa23.46■■□□□ 1.35
NPLOC4-215ENST00000574095 PGM2Q96G03 612 aa23.46■■□□□ 1.35
NPLOC4-215ENST00000574095 KLHDC3Q9BQ90 382 aa23.46■■□□□ 1.35
NPLOC4-215ENST00000574095 CLEC4MQ9H2X3 399 aaPredicted RBP23.46■■□□□ 1.35
NPLOC4-215ENST00000574095 PIGMQ9H3S5 423 aa23.46■■□□□ 1.35
NPLOC4-215ENST00000574095 NEUROD4Q9HD90 331 aa23.46■■□□□ 1.35
NPLOC4-215ENST00000574095 PNPOQ9NVS9 261 aa23.46■■□□□ 1.35
NPLOC4-215ENST00000574095 PACSIN3Q9UKS6 424 aa23.46■■□□□ 1.35
NPLOC4-215ENST00000574095 CELSR1Q9NYQ6 3014 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms