RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 AQP7O14520 342 aa11.63□□□□□ -0.55
TRAPPC1-206ENST00000573989 BCKDKO14874 412 aa11.63□□□□□ -0.55
TRAPPC1-206ENST00000573989 H6PDO95479 791 aa11.63□□□□□ -0.55
TRAPPC1-206ENST00000573989 NPPAP01160 153 aa11.63□□□□□ -0.55
TRAPPC1-206ENST00000573989 STSP08842 583 aa11.63□□□□□ -0.55
TRAPPC1-206ENST00000573989 DPP4P27487 766 aa11.63□□□□□ -0.55
TRAPPC1-206ENST00000573989 CRISP3P54108 245 aa11.63□□□□□ -0.55
TRAPPC1-206ENST00000573989 GTDC1Q4AE62 458 aa11.63□□□□□ -0.55
TRAPPC1-206ENST00000573989 COX20Q5RI15 118 aa11.63□□□□□ -0.55
TRAPPC1-206ENST00000573989 OR5M10Q6IEU7 315 aa11.63□□□□□ -0.55
TRAPPC1-206ENST00000573989 LRRC74BQ6ZQY2 392 aa11.63□□□□□ -0.55
TRAPPC1-206ENST00000573989 ZAR1Q86SH2 424 aa11.63□□□□□ -0.55
TRAPPC1-206ENST00000573989 ZNF619Q8N2I2 560 aa11.63□□□□□ -0.55
TRAPPC1-206ENST00000573989 FAM83FQ8NEG4 500 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC1-206ENST00000573989 OR14L1PQ8NHC6 308 aa11.63□□□□□ -0.55
TRAPPC1-206ENST00000573989 RP9Q8TA86 221 aaKnown RBP11.63□□□□□ -0.55
TRAPPC1-206ENST00000573989 NEIL3Q8TAT5 605 aa11.63□□□□□ -0.55
TRAPPC1-206ENST00000573989 CGREF1Q99674 301 aa11.63□□□□□ -0.55
TRAPPC1-206ENST00000573989 DSN1Q9H410 356 aa11.63□□□□□ -0.55
TRAPPC1-206ENST00000573989 TAS2R10Q9NYW0 307 aa11.63□□□□□ -0.55
TRAPPC1-206ENST00000573989 VAPAQ9P0L0 249 aa11.63□□□□□ -0.55
TRAPPC1-206ENST00000573989 ACAD8Q9UKU7 415 aa11.63□□□□□ -0.55
TRAPPC1-206ENST00000573989 MKLN1Q9UL63 735 aa11.63□□□□□ -0.55
TRAPPC1-206ENST00000573989 GMEB1Q9Y692 573 aa11.63□□□□□ -0.55
TRAPPC1-206ENST00000573989 PCNX3Q9H6A9 2034 aa11.62□□□□□ -0.55
TRAPPC1-206ENST00000573989 IGLV3-32A0A0A0MS00 114 aa11.62□□□□□ -0.55
TRAPPC1-206ENST00000573989 C15orf38-AP3S2A0A0A6YYH1 394 aa11.62□□□□□ -0.55
TRAPPC1-206ENST00000573989 TRGV8A0A0C4DH27 118 aa11.62□□□□□ -0.55
TRAPPC1-206ENST00000573989 C5orf58C9J3I9 102 aa11.62□□□□□ -0.55
TRAPPC1-206ENST00000573989 NPIPA2E9PIF3 369 aa11.62□□□□□ -0.55
TRAPPC1-206ENST00000573989 NPIPA3F8WFD2 350 aa11.62□□□□□ -0.55
TRAPPC1-206ENST00000573989 KIAA0513O60268 411 aa11.62□□□□□ -0.55
TRAPPC1-206ENST00000573989 TPOP07202 933 aa11.62□□□□□ -0.55
TRAPPC1-206ENST00000573989 CELA3AP09093 270 aa11.62□□□□□ -0.55
TRAPPC1-206ENST00000573989 ETFAP13804 333 aa11.62□□□□□ -0.55
TRAPPC1-206ENST00000573989 HOXB9P17482 250 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC1-206ENST00000573989 MVDP53602 400 aa11.62□□□□□ -0.55
TRAPPC1-206ENST00000573989 PER3P56645 1201 aa11.62□□□□□ -0.55
TRAPPC1-206ENST00000573989 HSF1Q00613 529 aa11.62□□□□□ -0.55
TRAPPC1-206ENST00000573989 SF3B4Q15427 424 aaKnown RBP eCLIP11.62□□□□□ -0.55
TRAPPC1-206ENST00000573989 ZNF141Q15928 474 aa11.62□□□□□ -0.55
TRAPPC1-206ENST00000573989 TRMT5Q32P41 509 aaKnown RBP11.62□□□□□ -0.55
TRAPPC1-206ENST00000573989 KLHL26Q53HC5 615 aa11.62□□□□□ -0.55
TRAPPC1-206ENST00000573989 PDZK1Q5T2W1 519 aa11.62□□□□□ -0.55
TRAPPC1-206ENST00000573989 WLSQ5T9L3 541 aa11.62□□□□□ -0.55
TRAPPC1-206ENST00000573989 AP1ARQ63HQ0 302 aa11.62□□□□□ -0.55
TRAPPC1-206ENST00000573989 TYW3Q6IPR3 259 aaKnown RBP11.62□□□□□ -0.55
TRAPPC1-206ENST00000573989 MTFR2Q6P444 385 aa11.62□□□□□ -0.55
TRAPPC1-206ENST00000573989 AAGABQ6PD74 315 aa11.62□□□□□ -0.55
TRAPPC1-206ENST00000573989 APOOLQ6UXV4 268 aa11.62□□□□□ -0.55
TRAPPC1-206ENST00000573989 DLEU7Q6UYE1 221 aa11.62□□□□□ -0.55
TRAPPC1-206ENST00000573989 Q6ZPB1 254 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC1-206ENST00000573989 MTDHQ86UE4 582 aaKnown RBP11.62□□□□□ -0.55
TRAPPC1-206ENST00000573989 IFNEQ86WN2 208 aa11.62□□□□□ -0.55
TRAPPC1-206ENST00000573989 METTL25Q8N6Q8 603 aa11.62□□□□□ -0.55
TRAPPC1-206ENST00000573989 FADS6Q8N9I5 356 aa11.62□□□□□ -0.55
TRAPPC1-206ENST00000573989 B4GALNT2Q8NHY0 566 aa11.62□□□□□ -0.55
TRAPPC1-206ENST00000573989 FAM57AQ8TBR7 257 aa11.62□□□□□ -0.55
TRAPPC1-206ENST00000573989 SH3GL1Q99961 368 aa11.62□□□□□ -0.55
TRAPPC1-206ENST00000573989 THUMPD3Q9BV44 507 aaKnown RBP11.62□□□□□ -0.55
TRAPPC1-206ENST00000573989 OR2B2Q9GZK3 357 aa11.62□□□□□ -0.55
TRAPPC1-206ENST00000573989 SAP130Q9H0E3 1048 aa11.62□□□□□ -0.55
TRAPPC1-206ENST00000573989 MTHFD2LQ9H903 347 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC1-206ENST00000573989 GID8Q9NWU2 228 aa11.62□□□□□ -0.55
TRAPPC1-206ENST00000573989 FAM53CQ9NYF3 392 aa11.62□□□□□ -0.55
TRAPPC1-206ENST00000573989 SLC25A37Q9NYZ2 338 aa11.62□□□□□ -0.55
TRAPPC1-206ENST00000573989 MED11Q9P086 117 aa11.62□□□□□ -0.55
TRAPPC1-206ENST00000573989 SLAMF8Q9P0V8 285 aa11.62□□□□□ -0.55
TRAPPC1-206ENST00000573989 STOML1Q9UBI4 398 aa11.62□□□□□ -0.55
TRAPPC1-206ENST00000573989 SUCOQ9UBS9 1254 aaKnown RBP11.62□□□□□ -0.55
TRAPPC1-206ENST00000573989 FBXL2Q9UKC9 423 aa11.62□□□□□ -0.55
TRAPPC1-206ENST00000573989 SLC5A6Q9Y289 635 aa11.62□□□□□ -0.55
TRAPPC1-206ENST00000573989 ZNF835Q9Y2P0 537 aa11.62□□□□□ -0.55
TRAPPC1-206ENST00000573989 ARL2BPQ9Y2Y0 163 aa11.62□□□□□ -0.55
TRAPPC1-206ENST00000573989 HIVEP3Q5T1R4 2406 aa11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 HELZ2Q9BYK8 2649 aaKnown RBP11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 A0A087WZY1 265 aa11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 TRBV5-3A0A0A0MS03 114 aa11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 NPIPA5A0A0B4J1W7 369 aa11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 A0A0G2JPF8 293 aa11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 LOC100653049A0A140TA62 436 aa11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 SERINC4A6NH21 518 aa11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 FIGNL2A6NMB9 653 aa11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 HNRNPCL2B2RXH8 293 aa11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 HNRNPCL3B7ZW38 293 aa11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 NPIPA7E9PJI5 369 aa11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 NPIPB9F8W1W9 429 aa11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 LINC01387J3KSC0 135 aa11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 MRASO14807 208 aa11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 HCRTR2O43614 444 aa11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 EIF4E2O60573 245 aaKnown RBP11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 FCMRO60667 390 aa11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 HNRNPCL1O60812 293 aaKnown RBP11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 UGT2B17O75795 530 aa11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 DCTN3O75935 186 aa11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 KRT34O76011 436 aa11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 ACTL6AO96019 429 aa11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 BCHEP06276 602 aa11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 NPIPA8P0DM63 369 aa11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 HNRNPCL4P0DMR1 293 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms