RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 MED11Q9P086 117 aa8.33□□□□□ -1.08
NPLOC4-210ENST00000572824 C6orf203Q9P0P8 240 aaPredicted RBP8.33□□□□□ -1.08
NPLOC4-210ENST00000572824 VPS29Q9UBQ0 182 aa8.33□□□□□ -1.08
NPLOC4-210ENST00000572824 GIMAP2Q9UG22 337 aa8.33□□□□□ -1.08
NPLOC4-210ENST00000572824 MTRF1LQ9UGC7 380 aaKnown RBP8.33□□□□□ -1.08
NPLOC4-210ENST00000572824 MCM8Q9UJA3 840 aa8.33□□□□□ -1.08
NPLOC4-210ENST00000572824 ZNF180Q9UJW8 692 aa8.33□□□□□ -1.08
NPLOC4-210ENST00000572824 IKBKGQ9Y6K9 419 aa8.33□□□□□ -1.08
NPLOC4-210ENST00000572824 JMJD1CQ15652 2540 aa8.33□□□□□ -1.08
NPLOC4-210ENST00000572824 A0A087WUV0 522 aaPredicted RBP8.32□□□□□ -1.08
NPLOC4-210ENST00000572824 A0A1W2PNV4 684 aa8.32□□□□□ -1.08
NPLOC4-210ENST00000572824 GNG14A0A1W2PPG7 69 aa8.32□□□□□ -1.08
NPLOC4-210ENST00000572824 TUBAL3A6NHL2 446 aa8.32□□□□□ -1.08
NPLOC4-210ENST00000572824 TO15178 435 aa8.32□□□□□ -1.08
NPLOC4-210ENST00000572824 SEC14L5O43304 696 aa8.32□□□□□ -1.08
NPLOC4-210ENST00000572824 RIPK2O43353 540 aa8.32□□□□□ -1.08
NPLOC4-210ENST00000572824 OPN1LWP04000 364 aa8.32□□□□□ -1.08
NPLOC4-210ENST00000572824 SNRPAP09012 282 aaKnown RBP8.32□□□□□ -1.08
NPLOC4-210ENST00000572824 HMOX2P30519 316 aa8.32□□□□□ -1.08
NPLOC4-210ENST00000572824 PPICP45877 212 aa8.32□□□□□ -1.08
NPLOC4-210ENST00000572824 RFX3P48380 749 aa8.32□□□□□ -1.08
NPLOC4-210ENST00000572824 SERPINB9P50453 376 aa8.32□□□□□ -1.08
NPLOC4-210ENST00000572824 CLDN20P56880 219 aa8.32□□□□□ -1.08
NPLOC4-210ENST00000572824 FAM27E3Q08E93 113 aa8.32□□□□□ -1.08
NPLOC4-210ENST00000572824 CSTF3Q12996 717 aaKnown RBP8.32□□□□□ -1.08
NPLOC4-210ENST00000572824 RASA2Q15283 850 aa8.32□□□□□ -1.08
NPLOC4-210ENST00000572824 WHAMMP3Q1A5X7 153 aa8.32□□□□□ -1.08
NPLOC4-210ENST00000572824 CLEC6AQ6EIG7 209 aa8.32□□□□□ -1.08
NPLOC4-210ENST00000572824 SLC30A6Q6NXT4 461 aa8.32□□□□□ -1.08
NPLOC4-210ENST00000572824 METTL2BQ6P1Q9 378 aaKnown RBP8.32□□□□□ -1.08
NPLOC4-210ENST00000572824 GALNT18Q6P9A2 607 aa8.32□□□□□ -1.08
NPLOC4-210ENST00000572824 ZNF550Q7Z398 422 aa8.32□□□□□ -1.08
NPLOC4-210ENST00000572824 NUP54Q7Z3B4 507 aa8.32□□□□□ -1.08
NPLOC4-210ENST00000572824 IFNEQ86WN2 208 aa8.32□□□□□ -1.08
NPLOC4-210ENST00000572824 PLCZ1Q86YW0 608 aa8.32□□□□□ -1.08
NPLOC4-210ENST00000572824 CIARTQ8N365 385 aaPredicted RBP8.32□□□□□ -1.08
NPLOC4-210ENST00000572824 CLHC1Q8NHS4 586 aa8.32□□□□□ -1.08
NPLOC4-210ENST00000572824 METTL6Q8TCB7 284 aa8.32□□□□□ -1.08
NPLOC4-210ENST00000572824 FAM222BQ8WU58 562 aa8.32□□□□□ -1.08
NPLOC4-210ENST00000572824 GFM2Q969S9 779 aaKnown RBP8.32□□□□□ -1.08
NPLOC4-210ENST00000572824 CIDECQ96AQ7 238 aaPredicted RBP8.32□□□□□ -1.08
NPLOC4-210ENST00000572824 MTBPQ96DY7 904 aa8.32□□□□□ -1.08
NPLOC4-210ENST00000572824 ARSGQ96EG1 525 aa8.32□□□□□ -1.08
NPLOC4-210ENST00000572824 SLC35A4Q96G79 324 aa8.32□□□□□ -1.08
NPLOC4-210ENST00000572824 SFXN2Q96NB2 322 aa8.32□□□□□ -1.08
NPLOC4-210ENST00000572824 TXLNGYQ9BZA5 131 aa8.32□□□□□ -1.08
NPLOC4-210ENST00000572824 DSN1Q9H410 356 aa8.32□□□□□ -1.08
NPLOC4-210ENST00000572824 GLIPR2Q9H4G4 154 aa8.32□□□□□ -1.08
NPLOC4-210ENST00000572824 MID1IP1Q9NPA3 183 aa8.32□□□□□ -1.08
NPLOC4-210ENST00000572824 AHSPQ9NZD4 102 aa8.32□□□□□ -1.08
NPLOC4-210ENST00000572824 DKKL1Q9UK85 242 aa8.32□□□□□ -1.08
NPLOC4-210ENST00000572824 SNX6Q9UNH7 406 aa8.32□□□□□ -1.08
NPLOC4-210ENST00000572824 PCDHGB3Q9Y5G1 929 aa8.32□□□□□ -1.08
NPLOC4-210ENST00000572824 SONP18583 2426 aaKnown RBP8.32□□□□□ -1.08
NPLOC4-210ENST00000572824 CADP27708 2225 aa8.31□□□□□ -1.08
NPLOC4-210ENST00000572824 OR6C70A6NIJ9 312 aa8.31□□□□□ -1.08
NPLOC4-210ENST00000572824 SMIM23A6NLE4 172 aa8.31□□□□□ -1.08
NPLOC4-210ENST00000572824 CAPN14A8MX76 684 aa8.31□□□□□ -1.08
NPLOC4-210ENST00000572824 DEFB108AA8MXU0 73 aa8.31□□□□□ -1.08
NPLOC4-210ENST00000572824 TMEM233B4DJY2 109 aa8.31□□□□□ -1.08
NPLOC4-210ENST00000572824 ACOX3O15254 700 aa8.31□□□□□ -1.08
NPLOC4-210ENST00000572824 ANXA4P09525 319 aaPredicted RBP8.31□□□□□ -1.08
NPLOC4-210ENST00000572824 RHOXF2BP0C7M4 288 aa8.31□□□□□ -1.08
NPLOC4-210ENST00000572824 COL6A2P12110 1019 aa8.31□□□□□ -1.08
NPLOC4-210ENST00000572824 CD53P19397 219 aa8.31□□□□□ -1.08
NPLOC4-210ENST00000572824 DRD5P21918 477 aa8.31□□□□□ -1.08
NPLOC4-210ENST00000572824 ATP5F1P24539 256 aaPredicted RBP8.31□□□□□ -1.08
NPLOC4-210ENST00000572824 DNASE1P24855 282 aa8.31□□□□□ -1.08
NPLOC4-210ENST00000572824 DPP4P27487 766 aa8.31□□□□□ -1.08
NPLOC4-210ENST00000572824 SRD5A2P31213 254 aa8.31□□□□□ -1.08
NPLOC4-210ENST00000572824 EVI2BP34910 448 aa8.31□□□□□ -1.08
NPLOC4-210ENST00000572824 NCBP2P52298 156 aaKnown RBP eCLIP8.31□□□□□ -1.08
NPLOC4-210ENST00000572824 PRKAA2P54646 552 aa8.31□□□□□ -1.08
NPLOC4-210ENST00000572824 ACSM2AQ08AH3 577 aa8.31□□□□□ -1.08
NPLOC4-210ENST00000572824 KIR3DS1Q14943 382 aa8.31□□□□□ -1.08
NPLOC4-210ENST00000572824 DAZAP2Q15038 168 aaPredicted RBP8.31□□□□□ -1.08
NPLOC4-210ENST00000572824 ACSM2BQ68CK6 577 aa8.31□□□□□ -1.08
NPLOC4-210ENST00000572824 FAM71E1Q6IPT2 247 aa8.31□□□□□ -1.08
NPLOC4-210ENST00000572824 TMEM81Q6P7N7 255 aa8.31□□□□□ -1.08
NPLOC4-210ENST00000572824 ZNF474Q6S9Z5 364 aaPredicted RBP8.31□□□□□ -1.08
NPLOC4-210ENST00000572824 SH2D5Q6ZV89 423 aa8.31□□□□□ -1.08
NPLOC4-210ENST00000572824 ZNF551Q7Z340 670 aaPredicted RBP8.31□□□□□ -1.08
NPLOC4-210ENST00000572824 MARCH3Q86UD3 253 aa8.31□□□□□ -1.08
NPLOC4-210ENST00000572824 EXOC3L1Q86VI1 746 aa8.31□□□□□ -1.08
NPLOC4-210ENST00000572824 CXorf67Q86X51 503 aaPredicted RBP8.31□□□□□ -1.08
NPLOC4-210ENST00000572824 PM20D2Q8IYS1 436 aa8.31□□□□□ -1.08
NPLOC4-210ENST00000572824 FAM9CQ8IZT9 166 aa8.31□□□□□ -1.08
NPLOC4-210ENST00000572824 CCNYL1Q8N7R7 359 aa8.31□□□□□ -1.08
NPLOC4-210ENST00000572824 GATSQ8NAP1 163 aa8.31□□□□□ -1.08
NPLOC4-210ENST00000572824 MYRIPQ8NFW9 859 aa8.31□□□□□ -1.08
NPLOC4-210ENST00000572824 OR2M3Q8NG83 312 aa8.31□□□□□ -1.08
NPLOC4-210ENST00000572824 OR2T11Q8NH01 316 aa8.31□□□□□ -1.08
NPLOC4-210ENST00000572824 ZPLD1Q8TCW7 415 aa8.31□□□□□ -1.08
NPLOC4-210ENST00000572824 SMPDL3BQ92485 455 aa8.31□□□□□ -1.08
NPLOC4-210ENST00000572824 PIK3R3Q92569 461 aa8.31□□□□□ -1.08
NPLOC4-210ENST00000572824 SLC9A6Q92581 669 aa8.31□□□□□ -1.08
NPLOC4-210ENST00000572824 ANP32BQ92688 251 aaKnown RBP8.31□□□□□ -1.08
NPLOC4-210ENST00000572824 NINJ1Q92982 152 aa8.31□□□□□ -1.08
NPLOC4-210ENST00000572824 ZC3HAV1LQ96H79 300 aaKnown RBP8.31□□□□□ -1.08
NPLOC4-210ENST00000572824 RHOXF2Q9BQY4 288 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms