RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 TIA1P31483 386 aaKnown RBP eCLIP17.66■□□□□ 0.42
CCDC40-206ENST00000572083 HTR6P50406 440 aa17.66■□□□□ 0.42
CCDC40-206ENST00000572083 PSMD4P55036 377 aaKnown RBP17.66■□□□□ 0.42
CCDC40-206ENST00000572083 PRR5P85299 388 aa17.66■□□□□ 0.42
CCDC40-206ENST00000572083 GUCY2DQ02846 1103 aa17.66■□□□□ 0.42
CCDC40-206ENST00000572083 CAV1Q03135 178 aa17.66■□□□□ 0.42
CCDC40-206ENST00000572083 ACSM2AQ08AH3 577 aa17.66■□□□□ 0.42
CCDC40-206ENST00000572083 C2orf54Q08AI8 447 aa17.66■□□□□ 0.42
CCDC40-206ENST00000572083 ZNHIT3Q15649 155 aaPredicted RBP17.66■□□□□ 0.42
CCDC40-206ENST00000572083 ACSM2BQ68CK6 577 aa17.66■□□□□ 0.42
CCDC40-206ENST00000572083 GTPBP8Q8N3Z3 284 aaPredicted RBP17.66■□□□□ 0.42
CCDC40-206ENST00000572083 GATSQ8NAP1 163 aa17.66■□□□□ 0.42
CCDC40-206ENST00000572083 ABHD3Q8WU67 409 aa17.66■□□□□ 0.42
CCDC40-206ENST00000572083 ROBO4Q8WZ75 1007 aa17.66■□□□□ 0.42
CCDC40-206ENST00000572083 RHNO1Q9BSD3 238 aa17.66■□□□□ 0.42
CCDC40-206ENST00000572083 HDHD5Q9BXW7 423 aa17.66■□□□□ 0.42
CCDC40-206ENST00000572083 MRTO4Q9UKD2 239 aaKnown RBP17.66■□□□□ 0.42
CCDC40-206ENST00000572083 SNX8Q9Y5X2 465 aa17.66■□□□□ 0.42
CCDC40-206ENST00000572083 A0A096LNT2 108 aa17.65■□□□□ 0.42
CCDC40-206ENST00000572083 FAM234BA2RU67 622 aa17.65■□□□□ 0.42
CCDC40-206ENST00000572083 RAMP1O60894 148 aa17.65■□□□□ 0.42
CCDC40-206ENST00000572083 KRT6AP02538 564 aa17.65■□□□□ 0.42
CCDC40-206ENST00000572083 KRT6BP04259 564 aa17.65■□□□□ 0.42
CCDC40-206ENST00000572083 MAGEA12P43365 314 aa17.65■□□□□ 0.42
CCDC40-206ENST00000572083 KRT6CP48668 564 aa17.65■□□□□ 0.42
CCDC40-206ENST00000572083 RAC1P63000 192 aa17.65■□□□□ 0.42
CCDC40-206ENST00000572083 TSNAXIP1Q2TAA8 658 aa17.65■□□□□ 0.42
CCDC40-206ENST00000572083 TMEM249Q2WGJ8 235 aa17.65■□□□□ 0.42
CCDC40-206ENST00000572083 SPIN4Q56A73 249 aa17.65■□□□□ 0.42
CCDC40-206ENST00000572083 SFRP5Q5T4F7 317 aa17.65■□□□□ 0.42
CCDC40-206ENST00000572083 UBAP2Q5T6F2 1119 aaKnown RBP17.65■□□□□ 0.42
CCDC40-206ENST00000572083 SEZ6L2Q6UXD5 910 aa17.65■□□□□ 0.42
CCDC40-206ENST00000572083 ESPNLQ6ZVH7 1005 aa17.65■□□□□ 0.42
CCDC40-206ENST00000572083 NUFIP2Q7Z417 695 aaKnown RBP17.65■□□□□ 0.42
CCDC40-206ENST00000572083 OR2L13Q8N349 312 aa17.65■□□□□ 0.42
CCDC40-206ENST00000572083 BANPQ8N9N5 519 aa17.65■□□□□ 0.42
CCDC40-206ENST00000572083 HSD17B8Q92506 261 aa17.65■□□□□ 0.42
CCDC40-206ENST00000572083 PIK3R3Q92569 461 aa17.65■□□□□ 0.42
CCDC40-206ENST00000572083 KCNK17Q96T54 332 aa17.65■□□□□ 0.42
CCDC40-206ENST00000572083 LMF2Q9BU23 707 aaKnown RBP17.65■□□□□ 0.42
CCDC40-206ENST00000572083 KCNF1Q9H3M0 494 aa17.65■□□□□ 0.42
CCDC40-206ENST00000572083 UTP11Q9Y3A2 253 aaKnown RBP17.65■□□□□ 0.42
CCDC40-206ENST00000572083 A0A087WZY1 265 aa17.64■□□□□ 0.41
CCDC40-206ENST00000572083 A0A1W2PRB8 838 aa17.64■□□□□ 0.41
CCDC40-206ENST00000572083 DPRXA6NFQ7 191 aa17.64■□□□□ 0.41
CCDC40-206ENST00000572083 NDUFB5O43674 189 aa17.64■□□□□ 0.41
CCDC40-206ENST00000572083 ANXA4P09525 319 aaPredicted RBP17.64■□□□□ 0.41
CCDC40-206ENST00000572083 SBK3P0C264 359 aa17.64■□□□□ 0.41
CCDC40-206ENST00000572083 DDCP20711 480 aa17.64■□□□□ 0.41
CCDC40-206ENST00000572083 ME2P23368 584 aa17.64■□□□□ 0.41
CCDC40-206ENST00000572083 PSMA4P25789 261 aaKnown RBP17.64■□□□□ 0.41
CCDC40-206ENST00000572083 HSD17B3P37058 310 aa17.64■□□□□ 0.41
CCDC40-206ENST00000572083 NUDT6P53370 316 aa17.64■□□□□ 0.41
CCDC40-206ENST00000572083 CDH11P55287 796 aa17.64■□□□□ 0.41
CCDC40-206ENST00000572083 C21orf58P58505 322 aa17.64■□□□□ 0.41
CCDC40-206ENST00000572083 SRSF2Q01130 221 aaKnown RBP17.64■□□□□ 0.41
CCDC40-206ENST00000572083 CLCQ05315 142 aa17.64■□□□□ 0.41
CCDC40-206ENST00000572083 BTKQ06187 659 aa17.64■□□□□ 0.41
CCDC40-206ENST00000572083 ZNF239Q16600 458 aaKnown RBP17.64■□□□□ 0.41
CCDC40-206ENST00000572083 PLPPR5Q32ZL2 321 aa17.64■□□□□ 0.41
CCDC40-206ENST00000572083 TMEM201Q5SNT2 666 aa17.64■□□□□ 0.41
CCDC40-206ENST00000572083 SPATA4Q8NEY3 305 aa17.64■□□□□ 0.41
CCDC40-206ENST00000572083 PIWIL2Q8TC59 973 aaKnown RBP17.64■□□□□ 0.41
CCDC40-206ENST00000572083 RNF128Q8TEB7 428 aa17.64■□□□□ 0.41
CCDC40-206ENST00000572083 KISS1RQ969F8 398 aaPredicted RBP17.64■□□□□ 0.41
CCDC40-206ENST00000572083 KLHDC3Q9BQ90 382 aa17.64■□□□□ 0.41
CCDC40-206ENST00000572083 C19orf24Q9BVV8 132 aa17.64■□□□□ 0.41
CCDC40-206ENST00000572083 C1QTNF3Q9BXJ4 246 aa17.64■□□□□ 0.41
CCDC40-206ENST00000572083 BEX2Q9BXY8 128 aa17.64■□□□□ 0.41
CCDC40-206ENST00000572083 MRPL46Q9H2W6 279 aaKnown RBP17.64■□□□□ 0.41
CCDC40-206ENST00000572083 GLIPR2Q9H4G4 154 aa17.64■□□□□ 0.41
CCDC40-206ENST00000572083 EQTNQ9NQ60 294 aa17.64■□□□□ 0.41
CCDC40-206ENST00000572083 MED17Q9NVC6 651 aa17.64■□□□□ 0.41
CCDC40-206ENST00000572083 CISD1Q9NZ45 108 aaKnown RBP17.64■□□□□ 0.41
CCDC40-206ENST00000572083 B3GALT5Q9Y2C3 310 aa17.64■□□□□ 0.41
CCDC40-206ENST00000572083 CADP27708 2225 aa17.63■□□□□ 0.41
CCDC40-206ENST00000572083 ULK1O75385 1050 aa17.63■□□□□ 0.41
CCDC40-206ENST00000572083 KCNH1O95259 989 aa17.63■□□□□ 0.41
CCDC40-206ENST00000572083 ADAP00813 363 aa17.63■□□□□ 0.41
CCDC40-206ENST00000572083 SHC1P29353 583 aa17.63■□□□□ 0.41
CCDC40-206ENST00000572083 HMOX2P30519 316 aa17.63■□□□□ 0.41
CCDC40-206ENST00000572083 GABRA3P34903 492 aa17.63■□□□□ 0.41
CCDC40-206ENST00000572083 SFTPDP35247 375 aa17.63■□□□□ 0.41
CCDC40-206ENST00000572083 ZNF41P51814 821 aaPredicted RBP17.63■□□□□ 0.41
CCDC40-206ENST00000572083 CASP9P55211 416 aa17.63■□□□□ 0.41
CCDC40-206ENST00000572083 C2orf80Q0P641 193 aa17.63■□□□□ 0.41
CCDC40-206ENST00000572083 RASA2Q15283 850 aa17.63■□□□□ 0.41
CCDC40-206ENST00000572083 PDSS1Q5T2R2 415 aa17.63■□□□□ 0.41
CCDC40-206ENST00000572083 GTF2IRD2BQ6EKJ0 949 aa17.63■□□□□ 0.41
CCDC40-206ENST00000572083 DNAJC14Q6Y2X3 702 aaPredicted RBP17.63■□□□□ 0.41
CCDC40-206ENST00000572083 GTF2IRD2Q86UP8 949 aa17.63■□□□□ 0.41
CCDC40-206ENST00000572083 DTX2Q86UW9 622 aa17.63■□□□□ 0.41
CCDC40-206ENST00000572083 EXOC3L1Q86VI1 746 aa17.63■□□□□ 0.41
CCDC40-206ENST00000572083 TUSC5Q8IXB3 177 aa17.63■□□□□ 0.41
CCDC40-206ENST00000572083 POC1BQ8TC44 478 aa17.63■□□□□ 0.41
CCDC40-206ENST00000572083 METTL6Q8TCB7 284 aa17.63■□□□□ 0.41
CCDC40-206ENST00000572083 OSTF1Q92882 214 aa17.63■□□□□ 0.41
CCDC40-206ENST00000572083 ZBTB8AQ96BR9 441 aa17.63■□□□□ 0.41
CCDC40-206ENST00000572083 SH3YL1Q96HL8 342 aaPredicted RBP17.63■□□□□ 0.41
CCDC40-206ENST00000572083 KLHL15Q96M94 604 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms