RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 XAGE5Q8WWM1 108 aa12.62□□□□□ -0.39
RPAIN-209ENST00000571558 PIK3R3Q92569 461 aa12.62□□□□□ -0.39
RPAIN-209ENST00000571558 JADE3Q92613 823 aa12.62□□□□□ -0.39
RPAIN-209ENST00000571558 CCDC124Q96CT7 223 aaKnown RBP12.62□□□□□ -0.39
RPAIN-209ENST00000571558 ASB9Q96DX5 294 aa12.62□□□□□ -0.39
RPAIN-209ENST00000571558 RAB3IPQ96QF0 476 aaPredicted RBP12.62□□□□□ -0.39
RPAIN-209ENST00000571558 EGFL7Q9UHF1 273 aa12.62□□□□□ -0.39
RPAIN-209ENST00000571558 TRBV11-1A0A0K0K1C0 115 aa12.61□□□□□ -0.39
RPAIN-209ENST00000571558 GXYLT2A0PJZ3 443 aa12.61□□□□□ -0.39
RPAIN-209ENST00000571558 FRG2CA6NGY1 282 aa12.61□□□□□ -0.39
RPAIN-209ENST00000571558 A8MVJ9 347 aa12.61□□□□□ -0.39
RPAIN-209ENST00000571558 ARPC2O15144 300 aa12.61□□□□□ -0.39
RPAIN-209ENST00000571558 TO15178 435 aa12.61□□□□□ -0.39
RPAIN-209ENST00000571558 CD99P14209 185 aa12.61□□□□□ -0.39
RPAIN-209ENST00000571558 HOXB4P17483 251 aaPredicted RBP12.61□□□□□ -0.39
RPAIN-209ENST00000571558 GGT1P19440 569 aa12.61□□□□□ -0.39
RPAIN-209ENST00000571558 GABRA3P34903 492 aa12.61□□□□□ -0.39
RPAIN-209ENST00000571558 TRHRP34981 398 aaPredicted RBP12.61□□□□□ -0.39
RPAIN-209ENST00000571558 CLCN2P51788 898 aa12.61□□□□□ -0.39
RPAIN-209ENST00000571558 PCBP3P57721 371 aaKnown RBP12.61□□□□□ -0.39
RPAIN-209ENST00000571558 DCAF7P61962 342 aa12.61□□□□□ -0.39
RPAIN-209ENST00000571558 CDK6Q00534 326 aa12.61□□□□□ -0.39
RPAIN-209ENST00000571558 ZNHIT3Q15649 155 aaPredicted RBP12.61□□□□□ -0.39
RPAIN-209ENST00000571558 SYPL1Q16563 259 aa12.61□□□□□ -0.39
RPAIN-209ENST00000571558 BTBD16Q32M84 506 aa12.61□□□□□ -0.39
RPAIN-209ENST00000571558 ARHGAP11BQ3KRB8 267 aa12.61□□□□□ -0.39
RPAIN-209ENST00000571558 SLC29A4Q7RTT9 530 aa12.61□□□□□ -0.39
RPAIN-209ENST00000571558 SLC44A2Q8IWA5 706 aaPredicted RBP12.61□□□□□ -0.39
RPAIN-209ENST00000571558 ARMC10Q8N2F6 343 aa12.61□□□□□ -0.39
RPAIN-209ENST00000571558 METTL25Q8N6Q8 603 aa12.61□□□□□ -0.39
RPAIN-209ENST00000571558 SIRT6Q8N6T7 355 aa12.61□□□□□ -0.39
RPAIN-209ENST00000571558 ANKFN1Q8N957 763 aa12.61□□□□□ -0.39
RPAIN-209ENST00000571558 FAM13CQ8NE31 585 aa12.61□□□□□ -0.39
RPAIN-209ENST00000571558 OR4N2Q8NGD1 307 aa12.61□□□□□ -0.39
RPAIN-209ENST00000571558 NFKBIDQ8NI38 313 aa12.61□□□□□ -0.39
RPAIN-209ENST00000571558 NUBPLQ8TB37 319 aa12.61□□□□□ -0.39
RPAIN-209ENST00000571558 FAM110BQ8TC76 370 aa12.61□□□□□ -0.39
RPAIN-209ENST00000571558 TP53INP1Q96A56 240 aa12.61□□□□□ -0.39
RPAIN-209ENST00000571558 TMEM19Q96HH6 336 aa12.61□□□□□ -0.39
RPAIN-209ENST00000571558 GPR137Q96N19 417 aa12.61□□□□□ -0.39
RPAIN-209ENST00000571558 TRNT1Q96Q11 434 aaKnown RBP12.61□□□□□ -0.39
RPAIN-209ENST00000571558 TMUB1Q9BVT8 246 aa12.61□□□□□ -0.39
RPAIN-209ENST00000571558 BTBD2Q9BX70 525 aa12.61□□□□□ -0.39
RPAIN-209ENST00000571558 NXF5Q9H1B4 397 aaKnown RBP12.61□□□□□ -0.39
RPAIN-209ENST00000571558 STMN3Q9NZ72 180 aa12.61□□□□□ -0.39
RPAIN-209ENST00000571558 ACTR3BQ9P1U1 418 aa12.61□□□□□ -0.39
RPAIN-209ENST00000571558 P2RX2Q9UBL9 471 aa12.61□□□□□ -0.39
RPAIN-209ENST00000571558 TINAGQ9UJW2 476 aa12.61□□□□□ -0.39
RPAIN-209ENST00000571558 LIPT1Q9Y234 373 aa12.61□□□□□ -0.39
RPAIN-209ENST00000571558 SNX13Q9Y5W8 968 aa12.61□□□□□ -0.39
RPAIN-209ENST00000571558 C2orf92A0A1B0GVN3 265 aa12.6□□□□□ -0.39
RPAIN-209ENST00000571558 BCHEP06276 602 aa12.6□□□□□ -0.39
RPAIN-209ENST00000571558 CHRM4P08173 479 aa12.6□□□□□ -0.39
RPAIN-209ENST00000571558 GUSBP08236 651 aa12.6□□□□□ -0.39
RPAIN-209ENST00000571558 PIGAP37287 484 aa12.6□□□□□ -0.39
RPAIN-209ENST00000571558 ART1P52961 327 aa12.6□□□□□ -0.39
RPAIN-209ENST00000571558 CRYBA2P53672 197 aa12.6□□□□□ -0.39
RPAIN-209ENST00000571558 TRAP1Q12931 704 aaKnown RBP12.6□□□□□ -0.39
RPAIN-209ENST00000571558 SCARB2Q14108 478 aa12.6□□□□□ -0.39
RPAIN-209ENST00000571558 REEP3Q6NUK4 255 aa12.6□□□□□ -0.39
RPAIN-209ENST00000571558 CCDC80Q76M96 950 aa12.6□□□□□ -0.39
RPAIN-209ENST00000571558 SLC30A8Q8IWU4 369 aa12.6□□□□□ -0.39
RPAIN-209ENST00000571558 COX18Q8N8Q8 333 aa12.6□□□□□ -0.39
RPAIN-209ENST00000571558 HIPK4Q8NE63 616 aa12.6□□□□□ -0.39
RPAIN-209ENST00000571558 TNIP2Q8NFZ5 429 aa12.6□□□□□ -0.39
RPAIN-209ENST00000571558 GPR151Q8TDV0 419 aa12.6□□□□□ -0.39
RPAIN-209ENST00000571558 LCORQ96JN0 433 aaPredicted RBP12.6□□□□□ -0.39
RPAIN-209ENST00000571558 GAL3ST4Q96RP7 486 aa12.6□□□□□ -0.39
RPAIN-209ENST00000571558 SDF2Q99470 211 aa12.6□□□□□ -0.39
RPAIN-209ENST00000571558 SLC38A1Q9H2H9 487 aa12.6□□□□□ -0.39
RPAIN-209ENST00000571558 MUC13Q9H3R2 512 aa12.6□□□□□ -0.39
RPAIN-209ENST00000571558 GORASP2Q9H8Y8 452 aa12.6□□□□□ -0.39
RPAIN-209ENST00000571558 BCL2L10Q9HD36 194 aa12.6□□□□□ -0.39
RPAIN-209ENST00000571558 EXD2Q9NVH0 621 aa12.6□□□□□ -0.39
RPAIN-209ENST00000571558 PCDHGB3Q9Y5G1 929 aa12.6□□□□□ -0.39
RPAIN-209ENST00000571558 DSPPQ9NZW4 1301 aa12.6□□□□□ -0.39
RPAIN-209ENST00000571558 E9PLN8 166 aa12.59□□□□□ -0.39
RPAIN-209ENST00000571558 CXCR6O00574 342 aa12.59□□□□□ -0.39
RPAIN-209ENST00000571558 ACOX3O15254 700 aa12.59□□□□□ -0.39
RPAIN-209ENST00000571558 FCMRO60667 390 aa12.59□□□□□ -0.39
RPAIN-209ENST00000571558 ZFAND5O76080 213 aa12.59□□□□□ -0.39
RPAIN-209ENST00000571558 KCNK2O95069 426 aa12.59□□□□□ -0.39
RPAIN-209ENST00000571558 PGM3O95394 542 aa12.59□□□□□ -0.39
RPAIN-209ENST00000571558 NADKO95544 446 aaPredicted RBP12.59□□□□□ -0.39
RPAIN-209ENST00000571558 AK1P00568 194 aa12.59□□□□□ -0.39
RPAIN-209ENST00000571558 IGKV1D-16P01601 117 aa12.59□□□□□ -0.39
RPAIN-209ENST00000571558 NR2F1P10589 423 aa12.59□□□□□ -0.39
RPAIN-209ENST00000571558 ITGAMP11215 1152 aa12.59□□□□□ -0.39
RPAIN-209ENST00000571558 NCK1P16333 377 aa12.59□□□□□ -0.39
RPAIN-209ENST00000571558 ATP6V1B2P21281 511 aa12.59□□□□□ -0.39
RPAIN-209ENST00000571558 POU6F2P78424 691 aaPredicted RBP12.59□□□□□ -0.39
RPAIN-209ENST00000571558 MRPS22P82650 360 aaKnown RBP12.59□□□□□ -0.39
RPAIN-209ENST00000571558 NNATQ16517 81 aa12.59□□□□□ -0.39
RPAIN-209ENST00000571558 CYP27C1Q4G0S4 372 aa12.59□□□□□ -0.39
RPAIN-209ENST00000571558 DCST2Q5T1A1 773 aa12.59□□□□□ -0.39
RPAIN-209ENST00000571558 ATAD3BQ5T9A4 648 aa12.59□□□□□ -0.39
RPAIN-209ENST00000571558 PRAMEF8Q5VWM4 474 aa12.59□□□□□ -0.39
RPAIN-209ENST00000571558 PRAMEF7Q5VXH5 474 aa12.59□□□□□ -0.39
RPAIN-209ENST00000571558 LCN8Q6JVE9 175 aa12.59□□□□□ -0.39
RPAIN-209ENST00000571558 H3F3CQ6NXT2 135 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms