RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 RTL6Q6ICC9 239 aa6.35□□□□□ -1.39
SMG6-209ENST00000571442 CBLN3Q6UW01 205 aa6.35□□□□□ -1.39
SMG6-209ENST00000571442 PLXDC2Q6UX71 529 aa6.35□□□□□ -1.39
SMG6-209ENST00000571442 MSANTD1Q6ZTZ1 278 aa6.35□□□□□ -1.39
SMG6-209ENST00000571442 CD163Q86VB7 1156 aa6.35□□□□□ -1.39
SMG6-209ENST00000571442 PACS2Q86VP3 889 aa6.35□□□□□ -1.39
SMG6-209ENST00000571442 FJX1Q86VR8 437 aa6.35□□□□□ -1.39
SMG6-209ENST00000571442 DOLPP1Q86YN1 238 aa6.35□□□□□ -1.39
SMG6-209ENST00000571442 PLCZ1Q86YW0 608 aa6.35□□□□□ -1.39
SMG6-209ENST00000571442 TREML1Q86YW5 311 aa6.35□□□□□ -1.39
SMG6-209ENST00000571442 GHDCQ8N2G8 530 aa6.35□□□□□ -1.39
SMG6-209ENST00000571442 MARVELD2Q8N4S9 558 aa6.35□□□□□ -1.39
SMG6-209ENST00000571442 FAM83FQ8NEG4 500 aaPredicted RBP6.35□□□□□ -1.39
SMG6-209ENST00000571442 VPS37AQ8NEZ2 397 aa6.35□□□□□ -1.39
SMG6-209ENST00000571442 OR5M9Q8NGP3 310 aa6.35□□□□□ -1.39
SMG6-209ENST00000571442 OR5M1Q8NGP8 315 aa6.35□□□□□ -1.39
SMG6-209ENST00000571442 OR1J4Q8NGS1 313 aa6.35□□□□□ -1.39
SMG6-209ENST00000571442 DUSP19Q8WTR2 217 aa6.35□□□□□ -1.39
SMG6-209ENST00000571442 XAGE5Q8WWM1 108 aa6.35□□□□□ -1.39
SMG6-209ENST00000571442 ITCHQ96J02 903 aa6.35□□□□□ -1.39
SMG6-209ENST00000571442 ELAC2Q9BQ52 826 aaKnown RBP6.35□□□□□ -1.39
SMG6-209ENST00000571442 CPPED1Q9BRF8 314 aaPredicted RBP6.35□□□□□ -1.39
SMG6-209ENST00000571442 SIKE1Q9BRV8 207 aa6.35□□□□□ -1.39
SMG6-209ENST00000571442 OR2B2Q9GZK3 357 aa6.35□□□□□ -1.39
SMG6-209ENST00000571442 ZNF350Q9GZX5 532 aa6.35□□□□□ -1.39
SMG6-209ENST00000571442 FAM107BQ9H098 131 aa6.35□□□□□ -1.39
SMG6-209ENST00000571442 SLC38A1Q9H2H9 487 aa6.35□□□□□ -1.39
SMG6-209ENST00000571442 TPT1P8Q9HAU6 139 aa6.35□□□□□ -1.39
SMG6-209ENST00000571442 PNPLA3Q9NST1 481 aa6.35□□□□□ -1.39
SMG6-209ENST00000571442 RYDENQ9NUL5 291 aaKnown RBP6.35□□□□□ -1.39
SMG6-209ENST00000571442 MKLN1Q9UL63 735 aa6.35□□□□□ -1.39
SMG6-209ENST00000571442 PCDHGB4Q9UN71 923 aa6.35□□□□□ -1.39
SMG6-209ENST00000571442 CENPEQ02224 2701 aa6.35□□□□□ -1.39
SMG6-209ENST00000571442 PHF3Q92576 2039 aaKnown RBP6.35□□□□□ -1.39
SMG6-209ENST00000571442 ARHGAP21Q5T5U3 1957 aa6.35□□□□□ -1.39
SMG6-209ENST00000571442 IGLV3-32A0A0A0MS00 114 aa6.34□□□□□ -1.39
SMG6-209ENST00000571442 TRGV8A0A0C4DH27 118 aa6.34□□□□□ -1.39
SMG6-209ENST00000571442 A0A1W2PP18 115 aa6.34□□□□□ -1.39
SMG6-209ENST00000571442 H0YC42 278 aa6.34□□□□□ -1.39
SMG6-209ENST00000571442 FXYD1O00168 92 aa6.34□□□□□ -1.39
SMG6-209ENST00000571442 CLIC1O00299 241 aa6.34□□□□□ -1.39
SMG6-209ENST00000571442 AQP7O14520 342 aa6.34□□□□□ -1.39
SMG6-209ENST00000571442 LRRTM2O43300 516 aa6.34□□□□□ -1.39
SMG6-209ENST00000571442 KIAA0513O60268 411 aa6.34□□□□□ -1.39
SMG6-209ENST00000571442 SNX3O60493 162 aa6.34□□□□□ -1.39
SMG6-209ENST00000571442 UGT2B17O75795 530 aa6.34□□□□□ -1.39
SMG6-209ENST00000571442 AGFG2O95081 481 aa6.34□□□□□ -1.39
SMG6-209ENST00000571442 H6PDO95479 791 aa6.34□□□□□ -1.39
SMG6-209ENST00000571442 LDLRP01130 860 aa6.34□□□□□ -1.39
SMG6-209ENST00000571442 TPOP07202 933 aa6.34□□□□□ -1.39
SMG6-209ENST00000571442 NGFRP08138 427 aa6.34□□□□□ -1.39
SMG6-209ENST00000571442 BMP7P18075 431 aa6.34□□□□□ -1.39
SMG6-209ENST00000571442 PTGS2P35354 604 aa6.34□□□□□ -1.39
SMG6-209ENST00000571442 CA7P43166 264 aa6.34□□□□□ -1.39
SMG6-209ENST00000571442 STARP49675 285 aa6.34□□□□□ -1.39
SMG6-209ENST00000571442 KHKP50053 298 aa6.34□□□□□ -1.39
SMG6-209ENST00000571442 ATP12AP54707 1039 aa6.34□□□□□ -1.39
SMG6-209ENST00000571442 TPD52P55327 224 aaPredicted RBP6.34□□□□□ -1.39
SMG6-209ENST00000571442 CLDN15P56746 228 aa6.34□□□□□ -1.39
SMG6-209ENST00000571442 PSPHP78330 225 aa6.34□□□□□ -1.39
SMG6-209ENST00000571442 RPP38P78345 283 aaKnown RBP6.34□□□□□ -1.39
SMG6-209ENST00000571442 ADORA2A-AS1P86434 159 aa6.34□□□□□ -1.39
SMG6-209ENST00000571442 ZNF117Q03924 483 aa6.34□□□□□ -1.39
SMG6-209ENST00000571442 CRYZQ08257 329 aaKnown RBP6.34□□□□□ -1.39
SMG6-209ENST00000571442 CAPRIN1Q14444 709 aaKnown RBP6.34□□□□□ -1.39
SMG6-209ENST00000571442 RGNQ15493 299 aa6.34□□□□□ -1.39
SMG6-209ENST00000571442 TOMM34Q15785 309 aaPredicted RBP6.34□□□□□ -1.39
SMG6-209ENST00000571442 FLYWCH1Q4VC44 716 aa6.34□□□□□ -1.39
SMG6-209ENST00000571442 KLHL26Q53HC5 615 aa6.34□□□□□ -1.39
SMG6-209ENST00000571442 PDZK1Q5T2W1 519 aa6.34□□□□□ -1.39
SMG6-209ENST00000571442 METTL21CQ5VZV1 264 aa6.34□□□□□ -1.39
SMG6-209ENST00000571442 REP15Q6BDI9 236 aa6.34□□□□□ -1.39
SMG6-209ENST00000571442 ARSKQ6UWY0 536 aa6.34□□□□□ -1.39
SMG6-209ENST00000571442 BNC2Q6ZN30 1099 aaPredicted RBP6.34□□□□□ -1.39
SMG6-209ENST00000571442 SEM1Q6ZVN7 128 aa6.34□□□□□ -1.39
SMG6-209ENST00000571442 POU5F2Q8N7G0 328 aa6.34□□□□□ -1.39
SMG6-209ENST00000571442 NEIL3Q8TAT5 605 aa6.34□□□□□ -1.39
SMG6-209ENST00000571442 FAM57AQ8TBR7 257 aa6.34□□□□□ -1.39
SMG6-209ENST00000571442 POC1BQ8TC44 478 aa6.34□□□□□ -1.39
SMG6-209ENST00000571442 MAL2Q969L2 176 aa6.34□□□□□ -1.39
SMG6-209ENST00000571442 ROPN1LQ96C74 230 aa6.34□□□□□ -1.39
SMG6-209ENST00000571442 SH3YL1Q96HL8 342 aaPredicted RBP6.34□□□□□ -1.39
SMG6-209ENST00000571442 SLC39A3Q9BRY0 314 aa6.34□□□□□ -1.39
SMG6-209ENST00000571442 CCDC106Q9BWC9 280 aa6.34□□□□□ -1.39
SMG6-209ENST00000571442 UGT2B28Q9BY64 529 aa6.34□□□□□ -1.39
SMG6-209ENST00000571442 SAP130Q9H0E3 1048 aa6.34□□□□□ -1.39
SMG6-209ENST00000571442 MYLK2Q9H1R3 596 aa6.34□□□□□ -1.39
SMG6-209ENST00000571442 RMND5AQ9H871 391 aa6.34□□□□□ -1.39
SMG6-209ENST00000571442 ACKR4Q9NPB9 350 aa6.34□□□□□ -1.39
SMG6-209ENST00000571442 UBQLN4Q9NRR5 601 aa6.34□□□□□ -1.39
SMG6-209ENST00000571442 PPP4R1LQ9P1A2 415 aa6.34□□□□□ -1.39
SMG6-209ENST00000571442 GMPR2Q9P2T1 348 aaKnown RBP6.34□□□□□ -1.39
SMG6-209ENST00000571442 ABCG2Q9UNQ0 655 aa6.34□□□□□ -1.39
SMG6-209ENST00000571442 USP22Q9UPT9 525 aa6.34□□□□□ -1.39
SMG6-209ENST00000571442 RPH3AQ9Y2J0 694 aaPredicted RBP6.34□□□□□ -1.39
SMG6-209ENST00000571442 CHST2Q9Y4C5 530 aa6.34□□□□□ -1.39
SMG6-209ENST00000571442 FAM215AQ9Y5M1 114 aa6.34□□□□□ -1.39
SMG6-209ENST00000571442 CACNA1DQ01668 2161 aa6.34□□□□□ -1.4
SMG6-209ENST00000571442 DOPEY1Q5JWR5 2465 aa6.33□□□□□ -1.4
SMG6-209ENST00000571442 LOC100653049A0A140TA62 436 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms