RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 IQCGQ9H095 443 aaKnown RBP14.07□□□□□ -0.16
HERPUD1-215ENST00000568676 BARX1Q9HBU1 254 aaPredicted RBP14.07□□□□□ -0.16
HERPUD1-215ENST00000568676 GP6Q9HCN6 339 aa14.07□□□□□ -0.16
HERPUD1-215ENST00000568676 FLRT3Q9NZU0 649 aa14.07□□□□□ -0.16
HERPUD1-215ENST00000568676 VDAC3Q9Y277 283 aa14.07□□□□□ -0.16
HERPUD1-215ENST00000568676 STAB1Q9NY15 2570 aa14.07□□□□□ -0.16
HERPUD1-215ENST00000568676 NDUFB5O43674 189 aa14.06□□□□□ -0.16
HERPUD1-215ENST00000568676 CD3EP07766 207 aa14.06□□□□□ -0.16
HERPUD1-215ENST00000568676 DANCRP0C864 163 aa14.06□□□□□ -0.16
HERPUD1-215ENST00000568676 NID1P14543 1247 aa14.06□□□□□ -0.16
HERPUD1-215ENST00000568676 IMPDH1P20839 514 aa14.06□□□□□ -0.16
HERPUD1-215ENST00000568676 AGTR1P30556 359 aa14.06□□□□□ -0.16
HERPUD1-215ENST00000568676 ZNF41P51814 821 aaPredicted RBP14.06□□□□□ -0.16
HERPUD1-215ENST00000568676 LCP2Q13094 533 aa14.06□□□□□ -0.16
HERPUD1-215ENST00000568676 SLC29A2Q14542 456 aa14.06□□□□□ -0.16
HERPUD1-215ENST00000568676 RNPS1Q15287 305 aaKnown RBP14.06□□□□□ -0.16
HERPUD1-215ENST00000568676 UNC50Q53HI1 259 aa14.06□□□□□ -0.16
HERPUD1-215ENST00000568676 NCMAPQ5T1S8 102 aa14.06□□□□□ -0.16
HERPUD1-215ENST00000568676 CPTPQ5TA50 214 aa14.06□□□□□ -0.16
HERPUD1-215ENST00000568676 IKBIPQ70UQ0 350 aa14.06□□□□□ -0.16
HERPUD1-215ENST00000568676 GALNT10Q86SR1 603 aa14.06□□□□□ -0.16
HERPUD1-215ENST00000568676 SLC22A9Q8IVM8 553 aa14.06□□□□□ -0.16
HERPUD1-215ENST00000568676 CNPY4Q8N129 248 aa14.06□□□□□ -0.16
HERPUD1-215ENST00000568676 SMAP2Q8WU79 429 aaPredicted RBP14.06□□□□□ -0.16
HERPUD1-215ENST00000568676 REXO5Q96IC2 774 aaKnown RBP14.06□□□□□ -0.16
HERPUD1-215ENST00000568676 AMDHD1Q96NU7 426 aa14.06□□□□□ -0.16
HERPUD1-215ENST00000568676 GLIPR2Q9H4G4 154 aa14.06□□□□□ -0.16
HERPUD1-215ENST00000568676 MYNNQ9NPC7 610 aa14.06□□□□□ -0.16
HERPUD1-215ENST00000568676 TIGARQ9NQ88 270 aa14.06□□□□□ -0.16
HERPUD1-215ENST00000568676 CLEC4AQ9UMR7 237 aa14.06□□□□□ -0.16
HERPUD1-215ENST00000568676 USF3Q68DE3 2245 aa14.06□□□□□ -0.16
HERPUD1-215ENST00000568676 A0A1W2PP18 115 aa14.05□□□□□ -0.16
HERPUD1-215ENST00000568676 TRIM49D1C9J1S8 452 aa14.05□□□□□ -0.16
HERPUD1-215ENST00000568676 H3BQF6 201 aa14.05□□□□□ -0.16
HERPUD1-215ENST00000568676 CXCL13O43927 109 aa14.05□□□□□ -0.16
HERPUD1-215ENST00000568676 THBS1P07996 1170 aa14.05□□□□□ -0.16
HERPUD1-215ENST00000568676 SNRPAP09012 282 aaKnown RBP14.05□□□□□ -0.16
HERPUD1-215ENST00000568676 ADH6P28332 368 aa14.05□□□□□ -0.16
HERPUD1-215ENST00000568676 GABRA3P34903 492 aa14.05□□□□□ -0.16
HERPUD1-215ENST00000568676 EIF1P41567 113 aaKnown RBP14.05□□□□□ -0.16
HERPUD1-215ENST00000568676 RFX3P48380 749 aa14.05□□□□□ -0.16
HERPUD1-215ENST00000568676 NAA20P61599 178 aa14.05□□□□□ -0.16
HERPUD1-215ENST00000568676 GRAMD1BQ3KR37 738 aa14.05□□□□□ -0.16
HERPUD1-215ENST00000568676 SPDYAQ5MJ70 313 aa14.05□□□□□ -0.16
HERPUD1-215ENST00000568676 TMEM201Q5SNT2 666 aa14.05□□□□□ -0.16
HERPUD1-215ENST00000568676 TEX35Q5T0J7 233 aa14.05□□□□□ -0.16
HERPUD1-215ENST00000568676 HBMQ6B0K9 141 aa14.05□□□□□ -0.16
HERPUD1-215ENST00000568676 FAM71E1Q6IPT2 247 aa14.05□□□□□ -0.16
HERPUD1-215ENST00000568676 C8orf74Q6P047 294 aa14.05□□□□□ -0.16
HERPUD1-215ENST00000568676 TRABD2AQ86V40 505 aa14.05□□□□□ -0.16
HERPUD1-215ENST00000568676 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.05□□□□□ -0.16
HERPUD1-215ENST00000568676 HOXB13Q92826 284 aaPredicted RBP14.05□□□□□ -0.16
HERPUD1-215ENST00000568676 CPNE4Q96A23 557 aaPredicted RBP14.05□□□□□ -0.16
HERPUD1-215ENST00000568676 S100PBPQ96BU1 408 aa14.05□□□□□ -0.16
HERPUD1-215ENST00000568676 METTL2AQ96IZ6 378 aaKnown RBP14.05□□□□□ -0.16
HERPUD1-215ENST00000568676 EBPLQ9BY08 206 aa14.05□□□□□ -0.16
HERPUD1-215ENST00000568676 SLCO5A1Q9H2Y9 848 aa14.05□□□□□ -0.16
HERPUD1-215ENST00000568676 FAIMQ9NVQ4 179 aa14.05□□□□□ -0.16
HERPUD1-215ENST00000568676 ROS1P08922 2347 aa14.05□□□□□ -0.16
HERPUD1-215ENST00000568676 ESYT3A0FGR9 886 aa14.04□□□□□ -0.16
HERPUD1-215ENST00000568676 DLX3O60479 287 aa14.04□□□□□ -0.16
HERPUD1-215ENST00000568676 GCM2O75603 506 aaPredicted RBP14.04□□□□□ -0.16
HERPUD1-215ENST00000568676 NKX2-2O95096 273 aa14.04□□□□□ -0.16
HERPUD1-215ENST00000568676 HSPA4LO95757 839 aa14.04□□□□□ -0.16
HERPUD1-215ENST00000568676 SOD3P08294 240 aa14.04□□□□□ -0.16
HERPUD1-215ENST00000568676 PRPS2P11908 318 aa14.04□□□□□ -0.16
HERPUD1-215ENST00000568676 IL32P24001 234 aa14.04□□□□□ -0.16
HERPUD1-215ENST00000568676 ATP5F1P24539 256 aaPredicted RBP14.04□□□□□ -0.16
HERPUD1-215ENST00000568676 PSMA4P25789 261 aaKnown RBP14.04□□□□□ -0.16
HERPUD1-215ENST00000568676 ELK4P28324 431 aa14.04□□□□□ -0.16
HERPUD1-215ENST00000568676 CASQ1P31415 396 aa14.04□□□□□ -0.16
HERPUD1-215ENST00000568676 HTR6P50406 440 aa14.04□□□□□ -0.16
HERPUD1-215ENST00000568676 CARD18P57730 90 aa14.04□□□□□ -0.16
HERPUD1-215ENST00000568676 ZNF844Q08AG5 666 aa14.04□□□□□ -0.16
HERPUD1-215ENST00000568676 P2RY6Q15077 328 aa14.04□□□□□ -0.16
HERPUD1-215ENST00000568676 NRF1Q16656 503 aa14.04□□□□□ -0.16
HERPUD1-215ENST00000568676 PLPPR5Q32ZL2 321 aa14.04□□□□□ -0.16
HERPUD1-215ENST00000568676 CHRFAM7AQ494W8 412 aa14.04□□□□□ -0.16
HERPUD1-215ENST00000568676 ZNF672Q499Z4 452 aaPredicted RBP14.04□□□□□ -0.16
HERPUD1-215ENST00000568676 GLE1Q53GS7 698 aaKnown RBP14.04□□□□□ -0.16
HERPUD1-215ENST00000568676 SFRP5Q5T4F7 317 aa14.04□□□□□ -0.16
HERPUD1-215ENST00000568676 FIGNL1Q6PIW4 674 aa14.04□□□□□ -0.16
HERPUD1-215ENST00000568676 APOOLQ6UXV4 268 aa14.04□□□□□ -0.16
HERPUD1-215ENST00000568676 DNM1P46Q6ZS02 220 aa14.04□□□□□ -0.16
HERPUD1-215ENST00000568676 GABRG1Q8N1C3 465 aa14.04□□□□□ -0.16
HERPUD1-215ENST00000568676 CDRT4Q8N9R6 151 aa14.04□□□□□ -0.16
HERPUD1-215ENST00000568676 OR6Y1Q8NGX8 325 aa14.04□□□□□ -0.16
HERPUD1-215ENST00000568676 LILRB1Q8NHL6 650 aaPredicted RBP14.04□□□□□ -0.16
HERPUD1-215ENST00000568676 CEP70Q8NHQ1 597 aa14.04□□□□□ -0.16
HERPUD1-215ENST00000568676 RAB3IL1Q8TBN0 382 aa14.04□□□□□ -0.16
HERPUD1-215ENST00000568676 GPR151Q8TDV0 419 aa14.04□□□□□ -0.16
HERPUD1-215ENST00000568676 L3HYPDHQ96EM0 354 aa14.04□□□□□ -0.16
HERPUD1-215ENST00000568676 KLHL15Q96M94 604 aa14.04□□□□□ -0.16
HERPUD1-215ENST00000568676 RNF145Q96MT1 663 aa14.04□□□□□ -0.16
HERPUD1-215ENST00000568676 TMEM237Q96Q45 408 aa14.04□□□□□ -0.16
HERPUD1-215ENST00000568676 CDC42EP4Q9H3Q1 356 aaKnown RBP14.04□□□□□ -0.16
HERPUD1-215ENST00000568676 ALG2Q9H553 416 aa14.04□□□□□ -0.16
HERPUD1-215ENST00000568676 L2HGDHQ9H9P8 463 aa14.04□□□□□ -0.16
HERPUD1-215ENST00000568676 FBXO34Q9NWN3 711 aa14.04□□□□□ -0.16
HERPUD1-215ENST00000568676 LIPT1Q9Y234 373 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms