RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 CEBPGP53567 150 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 HCCSP53701 268 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 BTG1P62324 171 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 SKP1P63208 163 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 BLOC1S1P78537 153 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 FAM110CQ1W6H9 321 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 ZNF750Q32MQ0 723 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 MINDY4Q4G0A6 757 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 C9orf131Q5VYM1 1079 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 LRRTM4Q86VH4 590 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 OR4N5Q8IXE1 308 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 PGBD3Q8N328 593 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 FAM26EQ8N5C1 309 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 OR9A1PQ8NGU1 263 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 SLC22A12Q96S37 553 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 DMRT3Q9NQL9 472 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 USP36Q9P275 1121 aaKnown RBP10.24□□□□□ -0.77
PALB2-206ENST00000568219 ASB4Q9Y574 426 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 BTAF1O14981 1849 aa10.23□□□□□ -0.77
PALB2-206ENST00000568219 SCN2BO60939 215 aa10.23□□□□□ -0.77
PALB2-206ENST00000568219 ZNF623O75123 536 aa10.23□□□□□ -0.77
PALB2-206ENST00000568219 RBBP9O75884 186 aa10.23□□□□□ -0.77
PALB2-206ENST00000568219 CBX7O95931 251 aa10.23□□□□□ -0.77
PALB2-206ENST00000568219 RLN2P04090 185 aa10.23□□□□□ -0.77
PALB2-206ENST00000568219 NPR2P20594 1047 aa10.23□□□□□ -0.77
PALB2-206ENST00000568219 IMPA1P29218 277 aa10.23□□□□□ -0.77
PALB2-206ENST00000568219 RAD52P43351 418 aa10.23□□□□□ -0.77
PALB2-206ENST00000568219 CLDN2P57739 230 aa10.23□□□□□ -0.77
PALB2-206ENST00000568219 DSC1Q08554 894 aa10.23□□□□□ -0.77
PALB2-206ENST00000568219 SP140Q13342 867 aa10.23□□□□□ -0.77
PALB2-206ENST00000568219 GK2Q14410 553 aaPredicted RBP10.23□□□□□ -0.77
PALB2-206ENST00000568219 PRAMEF17Q5VTA0 474 aa10.23□□□□□ -0.77
PALB2-206ENST00000568219 TMPRSS12Q86WS5 348 aa10.23□□□□□ -0.77
PALB2-206ENST00000568219 DUSP18Q8NEJ0 188 aa10.23□□□□□ -0.77
PALB2-206ENST00000568219 OR4K13Q8NH42 304 aa10.23□□□□□ -0.77
PALB2-206ENST00000568219 ZCCHC10Q8TBK6 192 aa10.23□□□□□ -0.77
PALB2-206ENST00000568219 TFGQ92734 400 aaPredicted RBP10.23□□□□□ -0.77
PALB2-206ENST00000568219 SEC22AQ96IW7 307 aa10.23□□□□□ -0.77
PALB2-206ENST00000568219 MSLNLQ96KJ4 702 aa10.23□□□□□ -0.77
PALB2-206ENST00000568219 SAMD11Q96NU1 681 aa10.23□□□□□ -0.77
PALB2-206ENST00000568219 UQCC2Q9BRT2 126 aa10.23□□□□□ -0.77
PALB2-206ENST00000568219 C20orf85Q9H1P6 137 aa10.23□□□□□ -0.77
PALB2-206ENST00000568219 C12orf10Q9HB07 376 aa10.23□□□□□ -0.77
PALB2-206ENST00000568219 A0A087WUU8 490 aa10.23□□□□□ -0.77
PALB2-206ENST00000568219 ACOD1A6NK06 481 aa10.23□□□□□ -0.77
PALB2-206ENST00000568219 RAD1O60671 282 aa10.23□□□□□ -0.77
PALB2-206ENST00000568219 ATG12O94817 140 aa10.23□□□□□ -0.77
PALB2-206ENST00000568219 CFL1P23528 166 aaKnown RBP10.23□□□□□ -0.77
PALB2-206ENST00000568219 TPBGQ13641 420 aa10.23□□□□□ -0.77
PALB2-206ENST00000568219 IGSF11Q5DX21 431 aa10.23□□□□□ -0.77
PALB2-206ENST00000568219 CLLU1Q5K131 121 aa10.23□□□□□ -0.77
PALB2-206ENST00000568219 CHST9Q7L1S5 443 aa10.23□□□□□ -0.77
PALB2-206ENST00000568219 TAS1R1Q7RTX1 841 aa10.23□□□□□ -0.77
PALB2-206ENST00000568219 FAM220AQ7Z4H9 259 aa10.23□□□□□ -0.77
PALB2-206ENST00000568219 BEST3Q8N1M1 668 aa10.23□□□□□ -0.77
PALB2-206ENST00000568219 CHST4Q8NCG5 386 aa10.23□□□□□ -0.77
PALB2-206ENST00000568219 ABHD4Q8TB40 342 aa10.23□□□□□ -0.77
PALB2-206ENST00000568219 THAP6Q8TBB0 222 aa10.23□□□□□ -0.77
PALB2-206ENST00000568219 FANK1Q8TC84 345 aa10.23□□□□□ -0.77
PALB2-206ENST00000568219 TBC1D20Q96BZ9 403 aa10.23□□□□□ -0.77
PALB2-206ENST00000568219 C7orf50Q9BRJ6 194 aaKnown RBP10.23□□□□□ -0.77
PALB2-206ENST00000568219 SBF2Q86WG5 1849 aa10.23□□□□□ -0.77
PALB2-206ENST00000568219 A0A1W2PRU2 124 aa10.23□□□□□ -0.77
PALB2-206ENST00000568219 FFAR1O14842 300 aa10.23□□□□□ -0.77
PALB2-206ENST00000568219 SERPINA3P01011 423 aa10.23□□□□□ -0.77
PALB2-206ENST00000568219 HPXP02790 462 aa10.23□□□□□ -0.77
PALB2-206ENST00000568219 SLC35G4P0C7Q5 338 aa10.23□□□□□ -0.77
PALB2-206ENST00000568219 ACADLP28330 430 aa10.23□□□□□ -0.77
PALB2-206ENST00000568219 TLE2Q04725 743 aa10.23□□□□□ -0.77
PALB2-206ENST00000568219 NXPE4Q6UWF7 544 aa10.23□□□□□ -0.77
PALB2-206ENST00000568219 GSG1LQ6UXU4 331 aa10.23□□□□□ -0.77
PALB2-206ENST00000568219 OR4C15Q8NGM1 316 aa10.23□□□□□ -0.77
PALB2-206ENST00000568219 RGMAQ96B86 450 aa10.23□□□□□ -0.77
PALB2-206ENST00000568219 MNTQ99583 582 aa10.23□□□□□ -0.77
PALB2-206ENST00000568219 GPR174Q9BXC1 333 aa10.23□□□□□ -0.77
PALB2-206ENST00000568219 SPATA6Q9NWH7 488 aaPredicted RBP10.23□□□□□ -0.77
PALB2-206ENST00000568219 WDR45Q9Y484 360 aa10.23□□□□□ -0.77
PALB2-206ENST00000568219 NEUROG3Q9Y4Z2 214 aa10.23□□□□□ -0.77
PALB2-206ENST00000568219 MAP1BP46821 2468 aaKnown RBP10.22□□□□□ -0.77
PALB2-206ENST00000568219 LEFTY1O75610 366 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 IGHA2P01877 340 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 LIMS3P0CW19 117 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 LIMS4P0CW20 117 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 CTRB1P17538 263 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 S100A11P31949 105 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 SELENOPP49908 381 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 GRB14Q14449 540 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 OCLNQ16625 522 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 TMEM44Q2T9K0 475 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 PCGF3Q3KNV8 242 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 CTRB2Q6GPI1 263 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 C22orf39Q6P5X5 142 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 HSD11B1LQ7Z5J1 315 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 KIAA0907Q7Z7F0 614 aaPredicted RBP10.22□□□□□ -0.77
PALB2-206ENST00000568219 TMEM17Q86X19 198 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 LINC00471Q8N535 108 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 ZNF676Q8N7Q3 588 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 INO80EQ8NBZ0 244 aaPredicted RBP10.22□□□□□ -0.77
PALB2-206ENST00000568219 NLGN2Q8NFZ4 835 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 OR52B4Q8NGK2 314 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms