RNA–Protein interactions for RNA: ENST00000567806.1

GTF3C1-207, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 4

Gene GTF3C1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-207ENST00000567806 HSP90B2PQ58FF3 399 aa16.91■□□□□ 0.3
GTF3C1-207ENST00000567806 ZYG11AQ6WRX3 759 aa16.91■□□□□ 0.3
GTF3C1-207ENST00000567806 C20orf204Q6ZNR8 217 aa16.91■□□□□ 0.3
GTF3C1-207ENST00000567806 CEP70Q8NHQ1 597 aa16.91■□□□□ 0.3
GTF3C1-207ENST00000567806 Q96MF0 132 aa16.91■□□□□ 0.3
GTF3C1-207ENST00000567806 TMBIM4Q9HC24 238 aa16.91■□□□□ 0.3
GTF3C1-207ENST00000567806 EQTNQ9NQ60 294 aa16.91■□□□□ 0.3
GTF3C1-207ENST00000567806 EMC9Q9Y3B6 208 aa16.91■□□□□ 0.3
GTF3C1-207ENST00000567806 IGLV3-32A0A0A0MS00 114 aa16.9■□□□□ 0.3
GTF3C1-207ENST00000567806 HMGB1P1B2RPK0 211 aaPredicted RBP16.9■□□□□ 0.3
GTF3C1-207ENST00000567806 G3V2L1 256 aa16.9■□□□□ 0.3
GTF3C1-207ENST00000567806 H7C1Q1 480 aa16.9■□□□□ 0.3
GTF3C1-207ENST00000567806 EIF1AYO14602 144 aaKnown RBP16.9■□□□□ 0.3
GTF3C1-207ENST00000567806 TM9SF1O15321 606 aa16.9■□□□□ 0.3
GTF3C1-207ENST00000567806 AQP8O94778 261 aa16.9■□□□□ 0.3
GTF3C1-207ENST00000567806 LY6G6DO95868 133 aa16.9■□□□□ 0.3
GTF3C1-207ENST00000567806 IFI6P09912 130 aa16.9■□□□□ 0.3
GTF3C1-207ENST00000567806 EIF1AXP47813 144 aaKnown RBP16.9■□□□□ 0.3
GTF3C1-207ENST00000567806 PRKAG1P54619 331 aa16.9■□□□□ 0.3
GTF3C1-207ENST00000567806 CTBP2P56545 445 aa16.9■□□□□ 0.3
GTF3C1-207ENST00000567806 HSPB3Q12988 150 aa16.9■□□□□ 0.3
GTF3C1-207ENST00000567806 GRAMD1BQ3KR37 738 aa16.9■□□□□ 0.3
GTF3C1-207ENST00000567806 TNFAIP8L3Q5GJ75 292 aa16.9■□□□□ 0.3
GTF3C1-207ENST00000567806 ZNF551Q7Z340 670 aaPredicted RBP16.9■□□□□ 0.3
GTF3C1-207ENST00000567806 YTHDF3Q7Z739 585 aaKnown RBP16.9■□□□□ 0.3
GTF3C1-207ENST00000567806 WDR75Q8IWA0 830 aaKnown RBP16.9■□□□□ 0.3
GTF3C1-207ENST00000567806 PIK3R3Q92569 461 aa16.9■□□□□ 0.3
GTF3C1-207ENST00000567806 PERPQ96FX8 193 aa16.9■□□□□ 0.3
GTF3C1-207ENST00000567806 METTL2AQ96IZ6 378 aaKnown RBP16.9■□□□□ 0.3
GTF3C1-207ENST00000567806 FANCFQ9NPI8 374 aa16.9■□□□□ 0.3
GTF3C1-207ENST00000567806 PLSCR4Q9NRQ2 329 aa16.9■□□□□ 0.3
GTF3C1-207ENST00000567806 EMCNQ9ULC0 261 aa16.9■□□□□ 0.3
GTF3C1-207ENST00000567806 VDAC3Q9Y277 283 aa16.9■□□□□ 0.3
GTF3C1-207ENST00000567806 A0A087WZY1 265 aa16.89■□□□□ 0.29
GTF3C1-207ENST00000567806 A0A1W2PPM1 405 aa16.89■□□□□ 0.29
GTF3C1-207ENST00000567806 SHISA8B8ZZ34 492 aa16.89■□□□□ 0.29
GTF3C1-207ENST00000567806 PDPK1O15530 556 aa16.89■□□□□ 0.29
GTF3C1-207ENST00000567806 NDUFB5O43674 189 aa16.89■□□□□ 0.29
GTF3C1-207ENST00000567806 IGKV1D-16P01601 117 aa16.89■□□□□ 0.29
GTF3C1-207ENST00000567806 UROSP10746 265 aa16.89■□□□□ 0.29
GTF3C1-207ENST00000567806 PPP3CBP16298 524 aa16.89■□□□□ 0.29
GTF3C1-207ENST00000567806 CCKARP32238 428 aa16.89■□□□□ 0.29
GTF3C1-207ENST00000567806 SLC18A1P54219 525 aa16.89■□□□□ 0.29
GTF3C1-207ENST00000567806 GUSBP1Q15486 140 aa16.89■□□□□ 0.29
GTF3C1-207ENST00000567806 TMEM44Q2T9K0 475 aa16.89■□□□□ 0.29
GTF3C1-207ENST00000567806 APOOLQ6UXV4 268 aa16.89■□□□□ 0.29
GTF3C1-207ENST00000567806 FRMD7Q6ZUT3 714 aa16.89■□□□□ 0.29
GTF3C1-207ENST00000567806 SH2D5Q6ZV89 423 aa16.89■□□□□ 0.29
GTF3C1-207ENST00000567806 PLEKHM3Q6ZWE6 761 aa16.89■□□□□ 0.29
GTF3C1-207ENST00000567806 EXOC3L1Q86VI1 746 aa16.89■□□□□ 0.29
GTF3C1-207ENST00000567806 ZFP28Q8NHY6 868 aa16.89■□□□□ 0.29
GTF3C1-207ENST00000567806 NUDT8Q8WV74 236 aa16.89■□□□□ 0.29
GTF3C1-207ENST00000567806 ARSGQ96EG1 525 aa16.89■□□□□ 0.29
GTF3C1-207ENST00000567806 COX4I2Q96KJ9 171 aa16.89■□□□□ 0.29
GTF3C1-207ENST00000567806 EGLN2Q96KS0 407 aa16.89■□□□□ 0.29
GTF3C1-207ENST00000567806 HS3ST6Q96QI5 342 aa16.89■□□□□ 0.29
GTF3C1-207ENST00000567806 PAQR5Q9NXK6 330 aaPredicted RBP16.89■□□□□ 0.29
GTF3C1-207ENST00000567806 MCTS1Q9ULC4 181 aaKnown RBP16.89■□□□□ 0.29
GTF3C1-207ENST00000567806 SLC28A1O00337 649 aa16.88■□□□□ 0.29
GTF3C1-207ENST00000567806 SMAD7O15105 426 aaKnown RBP16.88■□□□□ 0.29
GTF3C1-207ENST00000567806 RGS14O43566 566 aa16.88■□□□□ 0.29
GTF3C1-207ENST00000567806 SYNGR4O95473 234 aa16.88■□□□□ 0.29
GTF3C1-207ENST00000567806 ZNF17P17021 662 aa16.88■□□□□ 0.29
GTF3C1-207ENST00000567806 MANFP55145 182 aaKnown RBP16.88■□□□□ 0.29
GTF3C1-207ENST00000567806 DNAJB13P59910 316 aa16.88■□□□□ 0.29
GTF3C1-207ENST00000567806 GGNQ86UU5 652 aa16.88■□□□□ 0.29
GTF3C1-207ENST00000567806 CIARTQ8N365 385 aaPredicted RBP16.88■□□□□ 0.29
GTF3C1-207ENST00000567806 BANPQ8N9N5 519 aa16.88■□□□□ 0.29
GTF3C1-207ENST00000567806 CDRT4Q8N9R6 151 aa16.88■□□□□ 0.29
GTF3C1-207ENST00000567806 CCDC63Q8NA47 563 aa16.88■□□□□ 0.29
GTF3C1-207ENST00000567806 NUP43Q8NFH3 380 aa16.88■□□□□ 0.29
GTF3C1-207ENST00000567806 OR6K3Q8NGY3 331 aa16.88■□□□□ 0.29
GTF3C1-207ENST00000567806 SLC9A6Q92581 669 aa16.88■□□□□ 0.29
GTF3C1-207ENST00000567806 GMPPAQ96IJ6 420 aaPredicted RBP16.88■□□□□ 0.29
GTF3C1-207ENST00000567806 MARK4Q96L34 752 aa16.88■□□□□ 0.29
GTF3C1-207ENST00000567806 ATP6V1G3Q96LB4 118 aa16.88■□□□□ 0.29
GTF3C1-207ENST00000567806 LRTM1Q9HBL6 345 aa16.88■□□□□ 0.29
GTF3C1-207ENST00000567806 MED4Q9NPJ6 270 aa16.88■□□□□ 0.29
GTF3C1-207ENST00000567806 C1orf109Q9NX04 203 aa16.88■□□□□ 0.29
GTF3C1-207ENST00000567806 CLEC4AQ9UMR7 237 aa16.88■□□□□ 0.29
GTF3C1-207ENST00000567806 ALG1L2C9J202 215 aa16.87■□□□□ 0.29
GTF3C1-207ENST00000567806 NKX2-2O95096 273 aa16.87■□□□□ 0.29
GTF3C1-207ENST00000567806 PROCP04070 461 aa16.87■□□□□ 0.29
GTF3C1-207ENST00000567806 HPGDP15428 266 aa16.87■□□□□ 0.29
GTF3C1-207ENST00000567806 IL11P20809 199 aa16.87■□□□□ 0.29
GTF3C1-207ENST00000567806 SLC6A8P48029 635 aa16.87■□□□□ 0.29
GTF3C1-207ENST00000567806 KIAA0040Q15053 153 aa16.87■□□□□ 0.29
GTF3C1-207ENST00000567806 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.87■□□□□ 0.29
GTF3C1-207ENST00000567806 BEX5Q5H9J7 111 aa16.87■□□□□ 0.29
GTF3C1-207ENST00000567806 CPTPQ5TA50 214 aa16.87■□□□□ 0.29
GTF3C1-207ENST00000567806 ANKRD26P1Q6NSI1 321 aa16.87■□□□□ 0.29
GTF3C1-207ENST00000567806 C22orf34Q6ZV56 151 aa16.87■□□□□ 0.29
GTF3C1-207ENST00000567806 SZRD1Q7Z422 152 aa16.87■□□□□ 0.29
GTF3C1-207ENST00000567806 C4orf33Q8N1A6 199 aa16.87■□□□□ 0.29
GTF3C1-207ENST00000567806 OR4C3Q8NH37 302 aa16.87■□□□□ 0.29
GTF3C1-207ENST00000567806 OR10D3Q8NH80 312 aa16.87■□□□□ 0.29
GTF3C1-207ENST00000567806 PPCDCQ96CD2 204 aa16.87■□□□□ 0.29
GTF3C1-207ENST00000567806 ZBED6CLQ96FA7 236 aaPredicted RBP16.87■□□□□ 0.29
GTF3C1-207ENST00000567806 GLRX2Q9NS18 164 aa16.87■□□□□ 0.29
GTF3C1-207ENST00000567806 SH3BP4Q9P0V3 963 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms