RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 NME6O75414 186 aaPredicted RBP16.75■□□□□ 0.27
LINC01238-205ENST00000567549 NKX2-2O95096 273 aa16.75■□□□□ 0.27
LINC01238-205ENST00000567549 KRT16P08779 473 aa16.75■□□□□ 0.27
LINC01238-205ENST00000567549 ALOX5P09917 674 aa16.75■□□□□ 0.27
LINC01238-205ENST00000567549 TBXA2RP21731 343 aa16.75■□□□□ 0.27
LINC01238-205ENST00000567549 HPCAL1P37235 193 aa16.75■□□□□ 0.27
LINC01238-205ENST00000567549 KIR2DL2P43627 348 aaPredicted RBP16.75■□□□□ 0.27
LINC01238-205ENST00000567549 FAM27E3Q08E93 113 aa16.75■□□□□ 0.27
LINC01238-205ENST00000567549 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.75■□□□□ 0.27
LINC01238-205ENST00000567549 PPP4R4Q6NUP7 873 aa16.75■□□□□ 0.27
LINC01238-205ENST00000567549 BTLAQ7Z6A9 289 aa16.75■□□□□ 0.27
LINC01238-205ENST00000567549 ZNF527Q8NB42 609 aa16.75■□□□□ 0.27
LINC01238-205ENST00000567549 NUP43Q8NFH3 380 aa16.75■□□□□ 0.27
LINC01238-205ENST00000567549 FNDC9Q8TBE3 224 aa16.75■□□□□ 0.27
LINC01238-205ENST00000567549 FIG4Q92562 907 aa16.75■□□□□ 0.27
LINC01238-205ENST00000567549 TIGARQ9NQ88 270 aa16.75■□□□□ 0.27
LINC01238-205ENST00000567549 UBQLN4Q9NRR5 601 aa16.75■□□□□ 0.27
LINC01238-205ENST00000567549 ATAD3AQ9NVI7 634 aa16.75■□□□□ 0.27
LINC01238-205ENST00000567549 KLHL28Q9NXS3 571 aa16.75■□□□□ 0.27
LINC01238-205ENST00000567549 C7orf72A4D263 438 aa16.74■□□□□ 0.27
LINC01238-205ENST00000567549 EIF1AYO14602 144 aaKnown RBP16.74■□□□□ 0.27
LINC01238-205ENST00000567549 TRIM13O60858 407 aa16.74■□□□□ 0.27
LINC01238-205ENST00000567549 TMCC2O75069 709 aa16.74■□□□□ 0.27
LINC01238-205ENST00000567549 KRT4P19013 534 aa16.74■□□□□ 0.27
LINC01238-205ENST00000567549 EIF1P41567 113 aaKnown RBP16.74■□□□□ 0.27
LINC01238-205ENST00000567549 EIF1AXP47813 144 aaKnown RBP16.74■□□□□ 0.27
LINC01238-205ENST00000567549 PRKAG1P54619 331 aa16.74■□□□□ 0.27
LINC01238-205ENST00000567549 NR1H2P55055 460 aa16.74■□□□□ 0.27
LINC01238-205ENST00000567549 GRAMD1BQ3KR37 738 aa16.74■□□□□ 0.27
LINC01238-205ENST00000567549 PRSS57Q6UWY2 283 aa16.74■□□□□ 0.27
LINC01238-205ENST00000567549 ESPNLQ6ZVH7 1005 aa16.74■□□□□ 0.27
LINC01238-205ENST00000567549 ZNF551Q7Z340 670 aaPredicted RBP16.74■□□□□ 0.27
LINC01238-205ENST00000567549 COX18Q8N8Q8 333 aa16.74■□□□□ 0.27
LINC01238-205ENST00000567549 PIK3IP1Q96FE7 263 aa16.74■□□□□ 0.27
LINC01238-205ENST00000567549 WFIKKN1Q96NZ8 548 aa16.74■□□□□ 0.27
LINC01238-205ENST00000567549 PRPF18Q99633 342 aaKnown RBP16.74■□□□□ 0.27
LINC01238-205ENST00000567549 CCL19Q99731 98 aa16.74■□□□□ 0.27
LINC01238-205ENST00000567549 OPN3Q9H1Y3 402 aaPredicted RBP16.74■□□□□ 0.27
LINC01238-205ENST00000567549 NTMQ9P121 344 aa16.74■□□□□ 0.27
LINC01238-205ENST00000567549 VDAC3Q9Y277 283 aa16.74■□□□□ 0.27
LINC01238-205ENST00000567549 MAP1AP78559 2803 aaPredicted RBP16.73■□□□□ 0.27
LINC01238-205ENST00000567549 A0A1W2PQD3 144 aa16.73■□□□□ 0.27
LINC01238-205ENST00000567549 GJE1A6NN92 205 aa16.73■□□□□ 0.27
LINC01238-205ENST00000567549 H3BNH8 94 aa16.73■□□□□ 0.27
LINC01238-205ENST00000567549 INHBBP09529 407 aa16.73■□□□□ 0.27
LINC01238-205ENST00000567549 ATP6V1C1P21283 382 aa16.73■□□□□ 0.27
LINC01238-205ENST00000567549 SUCLG1P53597 346 aaKnown RBP16.73■□□□□ 0.27
LINC01238-205ENST00000567549 RAC1P63000 192 aa16.73■□□□□ 0.27
LINC01238-205ENST00000567549 RPL38P63173 70 aaKnown RBP16.73■□□□□ 0.27
LINC01238-205ENST00000567549 MLC1Q15049 377 aa16.73■□□□□ 0.27
LINC01238-205ENST00000567549 KIAA0040Q15053 153 aa16.73■□□□□ 0.27
LINC01238-205ENST00000567549 HSP90B2PQ58FF3 399 aa16.73■□□□□ 0.27
LINC01238-205ENST00000567549 CLEC6AQ6EIG7 209 aa16.73■□□□□ 0.27
LINC01238-205ENST00000567549 PLXDC2Q6UX71 529 aa16.73■□□□□ 0.27
LINC01238-205ENST00000567549 BEND4Q6ZU67 534 aa16.73■□□□□ 0.27
LINC01238-205ENST00000567549 EXOC3L1Q86VI1 746 aa16.73■□□□□ 0.27
LINC01238-205ENST00000567549 GTPBP8Q8N3Z3 284 aaPredicted RBP16.73■□□□□ 0.27
LINC01238-205ENST00000567549 RIBC1Q8N443 379 aaPredicted RBP16.73■□□□□ 0.27
LINC01238-205ENST00000567549 WFDC11Q8NEX6 87 aa16.73■□□□□ 0.27
LINC01238-205ENST00000567549 HOXB13Q92826 284 aaPredicted RBP16.73■□□□□ 0.27
LINC01238-205ENST00000567549 ARL8AQ96BM9 186 aa16.73■□□□□ 0.27
LINC01238-205ENST00000567549 PPP3R2Q96LZ3 170 aa16.73■□□□□ 0.27
LINC01238-205ENST00000567549 BDH2Q9BUT1 245 aa16.73■□□□□ 0.27
LINC01238-205ENST00000567549 HOXD1Q9GZZ0 328 aa16.73■□□□□ 0.27
LINC01238-205ENST00000567549 OR10A4Q9H209 315 aa16.73■□□□□ 0.27
LINC01238-205ENST00000567549 MED4Q9NPJ6 270 aa16.73■□□□□ 0.27
LINC01238-205ENST00000567549 PLSCR4Q9NRQ2 329 aa16.73■□□□□ 0.27
LINC01238-205ENST00000567549 ZFHX3Q15911 3703 aa16.73■□□□□ 0.27
LINC01238-205ENST00000567549 HRNRQ86YZ3 2850 aaPredicted RBP16.72■□□□□ 0.27
LINC01238-205ENST00000567549 SMIM23A6NLE4 172 aa16.72■□□□□ 0.27
LINC01238-205ENST00000567549 OXSR1O95747 527 aaPredicted RBP16.72■□□□□ 0.27
LINC01238-205ENST00000567549 FRKP42685 505 aaPredicted RBP16.72■□□□□ 0.27
LINC01238-205ENST00000567549 CLDN20P56880 219 aa16.72■□□□□ 0.27
LINC01238-205ENST00000567549 ACKR1Q16570 336 aa16.72■□□□□ 0.27
LINC01238-205ENST00000567549 BEX5Q5H9J7 111 aa16.72■□□□□ 0.27
LINC01238-205ENST00000567549 CPTPQ5TA50 214 aa16.72■□□□□ 0.27
LINC01238-205ENST00000567549 ZNF474Q6S9Z5 364 aaPredicted RBP16.72■□□□□ 0.27
LINC01238-205ENST00000567549 CROCCP2Q86T23 111 aa16.72■□□□□ 0.27
LINC01238-205ENST00000567549 DDIASQ8IXT1 998 aa16.72■□□□□ 0.27
LINC01238-205ENST00000567549 GOLGA6L1Q8N7Z2 621 aa16.72■□□□□ 0.27
LINC01238-205ENST00000567549 PIK3R3Q92569 461 aa16.72■□□□□ 0.27
LINC01238-205ENST00000567549 JADE3Q92613 823 aa16.72■□□□□ 0.27
LINC01238-205ENST00000567549 CHMP6Q96FZ7 201 aa16.72■□□□□ 0.27
LINC01238-205ENST00000567549 EGLN2Q96KS0 407 aa16.72■□□□□ 0.27
LINC01238-205ENST00000567549 FCRL1Q96LA6 429 aa16.72■□□□□ 0.27
LINC01238-205ENST00000567549 TSSK3Q96PN8 268 aa16.72■□□□□ 0.27
LINC01238-205ENST00000567549 STACQ99469 402 aa16.72■□□□□ 0.27
LINC01238-205ENST00000567549 KLHL4Q9C0H6 718 aa16.72■□□□□ 0.27
LINC01238-205ENST00000567549 ZNF395Q9H8N7 513 aaPredicted RBP16.72■□□□□ 0.27
LINC01238-205ENST00000567549 UBTD1Q9HAC8 227 aa16.72■□□□□ 0.27
LINC01238-205ENST00000567549 DUSP22Q9NRW4 184 aa16.72■□□□□ 0.27
LINC01238-205ENST00000567549 GIN1Q9NXP7 522 aa16.72■□□□□ 0.27
LINC01238-205ENST00000567549 C6orf203Q9P0P8 240 aaPredicted RBP16.72■□□□□ 0.27
LINC01238-205ENST00000567549 FIS1Q9Y3D6 152 aa16.72■□□□□ 0.27
LINC01238-205ENST00000567549 CCL27Q9Y4X3 112 aa16.72■□□□□ 0.27
LINC01238-205ENST00000567549 SNX8Q9Y5X2 465 aa16.72■□□□□ 0.27
LINC01238-205ENST00000567549 ACANP16112 2415 aa16.71■□□□□ 0.27
LINC01238-205ENST00000567549 FLNAP21333 2647 aaKnown RBP16.71■□□□□ 0.27
LINC01238-205ENST00000567549 NF1P21359 2839 aa16.71■□□□□ 0.27
LINC01238-205ENST00000567549 GXYLT2A0PJZ3 443 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms