RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 NTNG2Q96CW9 530 aa11.11□□□□□ -0.63
SF3B3-208ENST00000567250 LRRC58Q96CX6 371 aa11.11□□□□□ -0.63
SF3B3-208ENST00000567250 RCN3Q96D15 328 aa11.11□□□□□ -0.63
SF3B3-208ENST00000567250 CPPED1Q9BRF8 314 aaPredicted RBP11.11□□□□□ -0.63
SF3B3-208ENST00000567250 THUMPD3Q9BV44 507 aaKnown RBP11.11□□□□□ -0.63
SF3B3-208ENST00000567250 SPATA9Q9BWV2 254 aa11.11□□□□□ -0.63
SF3B3-208ENST00000567250 SAP130Q9H0E3 1048 aa11.11□□□□□ -0.63
SF3B3-208ENST00000567250 TSPAN10Q9H1Z9 355 aaPredicted RBP11.11□□□□□ -0.63
SF3B3-208ENST00000567250 UBQLN3Q9H347 655 aa11.11□□□□□ -0.63
SF3B3-208ENST00000567250 LDAHQ9H6V9 325 aa11.11□□□□□ -0.63
SF3B3-208ENST00000567250 EFCAB1Q9HAE3 211 aa11.11□□□□□ -0.63
SF3B3-208ENST00000567250 A4GALTQ9NPC4 353 aa11.11□□□□□ -0.63
SF3B3-208ENST00000567250 FBXO34Q9NWN3 711 aa11.11□□□□□ -0.63
SF3B3-208ENST00000567250 FLRT3Q9NZU0 649 aa11.11□□□□□ -0.63
SF3B3-208ENST00000567250 SUCOQ9UBS9 1254 aaKnown RBP11.11□□□□□ -0.63
SF3B3-208ENST00000567250 MKLN1Q9UL63 735 aa11.11□□□□□ -0.63
SF3B3-208ENST00000567250 NPIPA1Q9UND3 350 aa11.11□□□□□ -0.63
SF3B3-208ENST00000567250 ANKUB1A6NFN9 424 aa11.1□□□□□ -0.63
SF3B3-208ENST00000567250 FAM47E-STBD1D6RA91 191 aa11.1□□□□□ -0.63
SF3B3-208ENST00000567250 NPIPB9F8W1W9 429 aa11.1□□□□□ -0.63
SF3B3-208ENST00000567250 HCN1O60741 890 aa11.1□□□□□ -0.63
SF3B3-208ENST00000567250 HPNP05981 417 aa11.1□□□□□ -0.63
SF3B3-208ENST00000567250 UBL4AP11441 157 aa11.1□□□□□ -0.63
SF3B3-208ENST00000567250 CD1EP15812 388 aa11.1□□□□□ -0.63
SF3B3-208ENST00000567250 MST1P26927 711 aa11.1□□□□□ -0.63
SF3B3-208ENST00000567250 MSX1P28360 303 aa11.1□□□□□ -0.63
SF3B3-208ENST00000567250 SRD5A2P31213 254 aa11.1□□□□□ -0.63
SF3B3-208ENST00000567250 GAS1P54826 345 aa11.1□□□□□ -0.63
SF3B3-208ENST00000567250 DSCR4P56555 118 aaPredicted RBP11.1□□□□□ -0.63
SF3B3-208ENST00000567250 MTPNP58546 118 aa11.1□□□□□ -0.63
SF3B3-208ENST00000567250 RBBP4Q09028 425 aa11.1□□□□□ -0.63
SF3B3-208ENST00000567250 ART3Q13508 389 aa11.1□□□□□ -0.63
SF3B3-208ENST00000567250 SLC10A1Q14973 349 aa11.1□□□□□ -0.63
SF3B3-208ENST00000567250 ZNF141Q15928 474 aa11.1□□□□□ -0.63
SF3B3-208ENST00000567250 SYPL1Q16563 259 aa11.1□□□□□ -0.63
SF3B3-208ENST00000567250 CYP51A1Q16850 503 aa11.1□□□□□ -0.63
SF3B3-208ENST00000567250 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.1□□□□□ -0.631e-8■□□□□ 10.9
SF3B3-208ENST00000567250 CMPK2Q5EBM0 449 aa11.1□□□□□ -0.63
SF3B3-208ENST00000567250 RNFT1Q5M7Z0 435 aa11.1□□□□□ -0.63
SF3B3-208ENST00000567250 PDZK1Q5T2W1 519 aa11.1□□□□□ -0.63
SF3B3-208ENST00000567250 FNDC7Q5VTL7 733 aa11.1□□□□□ -0.63
SF3B3-208ENST00000567250 FAM91A1Q658Y4 838 aa11.1□□□□□ -0.63
SF3B3-208ENST00000567250 MARCH3Q86UD3 253 aa11.1□□□□□ -0.63
SF3B3-208ENST00000567250 KRT73Q86Y46 540 aa11.1□□□□□ -0.63
SF3B3-208ENST00000567250 SLC30A8Q8IWU4 369 aa11.1□□□□□ -0.63
SF3B3-208ENST00000567250 PEX5LQ8IYB4 626 aa11.1□□□□□ -0.63
SF3B3-208ENST00000567250 WDSUB1Q8N9V3 476 aa11.1□□□□□ -0.63
SF3B3-208ENST00000567250 BBS10Q8TAM1 723 aa11.1□□□□□ -0.63
SF3B3-208ENST00000567250 PHOSPHO1Q8TCT1 267 aa11.1□□□□□ -0.63
SF3B3-208ENST00000567250 TMEM19Q96HH6 336 aa11.1□□□□□ -0.63
SF3B3-208ENST00000567250 TMEM38AQ9H6F2 299 aa11.1□□□□□ -0.63
SF3B3-208ENST00000567250 EXO5Q9H790 373 aa11.1□□□□□ -0.63
SF3B3-208ENST00000567250 ACKR4Q9NPB9 350 aa11.1□□□□□ -0.63
SF3B3-208ENST00000567250 ANGPT4Q9Y264 503 aa11.1□□□□□ -0.63
SF3B3-208ENST00000567250 SLC35A3Q9Y2D2 325 aa11.1□□□□□ -0.63
SF3B3-208ENST00000567250 AP3M1Q9Y2T2 418 aa11.1□□□□□ -0.63
SF3B3-208ENST00000567250 DSPPQ9NZW4 1301 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 IGLV3-32A0A0A0MS00 114 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 TRGV5A0A0B4J1U4 118 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 NPIPA5A0A0B4J1W7 369 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 A0A0G2JPF8 293 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 OR14I1A6ND48 311 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 SERINC4A6NH21 518 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 HNRNPCL2B2RXH8 293 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 HNRNPCL3B7ZW38 293 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 NPIPA7E9PJI5 369 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 FXYD1O00168 92 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 GTPBP1O00178 669 aaKnown RBP11.09□□□□□ -0.63
SF3B3-208ENST00000567250 AIM2O14862 343 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 ZNF264O43296 627 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 SUSD5O60279 629 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 FCMRO60667 390 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 HNRNPCL1O60812 293 aaKnown RBP11.09□□□□□ -0.63
SF3B3-208ENST00000567250 TNFRSF21O75509 655 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 UGT2B17O75795 530 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 TRAPPC6AO75865 159 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 IGHG3P01860 377 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 DBIP07108 87 aaKnown RBP11.09□□□□□ -0.63
SF3B3-208ENST00000567250 CHRM4P08173 479 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 TFPTP0C1Z6 253 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 NPIPA8P0DM63 369 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 HNRNPCL4P0DMR1 293 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 ARAFP10398 606 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 PLA2G2AP14555 144 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 ABOP16442 354 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 IL7RP16871 459 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 SLC6A2P23975 617 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 ADH7P40394 386 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 NUDT2P50583 147 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 ZNF41P51814 821 aaPredicted RBP11.09□□□□□ -0.63
SF3B3-208ENST00000567250 MNAT1P51948 309 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 CASP6P55212 293 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 SUMO3P55854 103 aaPredicted RBP11.09□□□□□ -0.63
SF3B3-208ENST00000567250 CAPRIN1Q14444 709 aaKnown RBP11.09□□□□□ -0.63
SF3B3-208ENST00000567250 FGFBP1Q14512 234 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 ZSWIM7Q19AV6 140 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 KLHL26Q53HC5 615 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 AP1ARQ63HQ0 302 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 NANOGP8Q6NSW7 305 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 HACD2Q6Y1H2 254 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms