RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 SGO1Q5FBB7 561 aa8.65□□□□□ -1.02
CAPN3-216ENST00000567071 TOR1AIP1Q5JTV8 583 aa8.65□□□□□ -1.02
CAPN3-216ENST00000567071 KANK2Q63ZY3 851 aa8.65□□□□□ -1.02
CAPN3-216ENST00000567071 NXPE4Q6UWF7 544 aa8.65□□□□□ -1.02
CAPN3-216ENST00000567071 UGT2A3Q6UWM9 527 aa8.65□□□□□ -1.02
CAPN3-216ENST00000567071 SLCO4C1Q6ZQN7 724 aa8.65□□□□□ -1.02
CAPN3-216ENST00000567071 FAM214BQ7L5A3 538 aa8.65□□□□□ -1.02
CAPN3-216ENST00000567071 MAVSQ7Z434 540 aa8.65□□□□□ -1.02
CAPN3-216ENST00000567071 C9orf40Q8IXQ3 194 aa8.65□□□□□ -1.02
CAPN3-216ENST00000567071 LINC01356Q8N9X3 169 aa8.65□□□□□ -1.02
CAPN3-216ENST00000567071 ZNF540Q8NDQ6 660 aa8.65□□□□□ -1.02
CAPN3-216ENST00000567071 RFWD2Q8NHY2 731 aa8.65□□□□□ -1.02
CAPN3-216ENST00000567071 PIWIL2Q8TC59 973 aaKnown RBP8.65□□□□□ -1.02
CAPN3-216ENST00000567071 SPPL2AQ8TCT8 520 aa8.65□□□□□ -1.02
CAPN3-216ENST00000567071 ZNF721Q8TF20 911 aa8.65□□□□□ -1.02
CAPN3-216ENST00000567071 SENP5Q96HI0 755 aaPredicted RBP8.65□□□□□ -1.02
CAPN3-216ENST00000567071 SFXN2Q96NB2 322 aa8.65□□□□□ -1.02
CAPN3-216ENST00000567071 HBEGFQ99075 208 aa8.65□□□□□ -1.02
CAPN3-216ENST00000567071 ELAC2Q9BQ52 826 aaKnown RBP8.65□□□□□ -1.02
CAPN3-216ENST00000567071 KRTAP17-1Q9BYP8 105 aa8.65□□□□□ -1.02
CAPN3-216ENST00000567071 SPNS1Q9H2V7 528 aa8.65□□□□□ -1.02
CAPN3-216ENST00000567071 METTL7AQ9H8H3 244 aa8.65□□□□□ -1.02
CAPN3-216ENST00000567071 PRM3Q9NNZ6 103 aa8.65□□□□□ -1.02
CAPN3-216ENST00000567071 HAO1Q9UJM8 370 aa8.65□□□□□ -1.02
CAPN3-216ENST00000567071 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.65□□□□□ -1.02
CAPN3-216ENST00000567071 TRAF6Q9Y4K3 522 aa8.65□□□□□ -1.02
CAPN3-216ENST00000567071 CLDN16Q9Y5I7 305 aa8.65□□□□□ -1.02
CAPN3-216ENST00000567071 FKBP7Q9Y680 259 aa8.65□□□□□ -1.02
CAPN3-216ENST00000567071 USH1CQ9Y6N9 552 aa8.65□□□□□ -1.02
CAPN3-216ENST00000567071 IGHV4-61A0A0C4DH41 118 aa8.64□□□□□ -1.03
CAPN3-216ENST00000567071 A0A0G2JND7 137 aa8.64□□□□□ -1.03
CAPN3-216ENST00000567071 VWC2LB2RUY7 222 aa8.64□□□□□ -1.03
CAPN3-216ENST00000567071 PIN1P1O15428 100 aa8.64□□□□□ -1.03
CAPN3-216ENST00000567071 CBR3O75828 277 aa8.64□□□□□ -1.03
CAPN3-216ENST00000567071 SNUPNO95149 360 aaKnown RBP8.64□□□□□ -1.03
CAPN3-216ENST00000567071 PLGP00747 810 aaPredicted RBP8.64□□□□□ -1.03
CAPN3-216ENST00000567071 C1GALT1C1LP0DN25 315 aa8.64□□□□□ -1.03
CAPN3-216ENST00000567071 VSIG8P0DPA2 414 aa8.64□□□□□ -1.03
CAPN3-216ENST00000567071 UROSP10746 265 aa8.64□□□□□ -1.03
CAPN3-216ENST00000567071 PCNAP12004 261 aa8.64□□□□□ -1.03
CAPN3-216ENST00000567071 FCGR2AP12318 317 aa8.64□□□□□ -1.03
CAPN3-216ENST00000567071 ZNF708P17019 499 aa8.64□□□□□ -1.03
CAPN3-216ENST00000567071 PSMB1P20618 241 aaKnown RBP8.64□□□□□ -1.03
CAPN3-216ENST00000567071 CASP3P42574 277 aa8.64□□□□□ -1.03
CAPN3-216ENST00000567071 NEK2P51955 445 aa8.64□□□□□ -1.03
CAPN3-216ENST00000567071 AQP5P55064 265 aa8.64□□□□□ -1.03
CAPN3-216ENST00000567071 CTBP2P56545 445 aa8.64□□□□□ -1.03
CAPN3-216ENST00000567071 CLDN18P56856 261 aa8.64□□□□□ -1.03
CAPN3-216ENST00000567071 FBXW4P57775 412 aa8.64□□□□□ -1.03
CAPN3-216ENST00000567071 C21orf58P58505 322 aa8.64□□□□□ -1.03
CAPN3-216ENST00000567071 DDX39BQ13838 428 aaKnown RBP8.64□□□□□ -1.03
CAPN3-216ENST00000567071 BCL2A1Q16548 175 aa8.64□□□□□ -1.03
CAPN3-216ENST00000567071 GGTA1PQ4G0N0 100 aa8.64□□□□□ -1.03
CAPN3-216ENST00000567071 ADNP2Q6IQ32 1131 aa8.64□□□□□ -1.03
CAPN3-216ENST00000567071 GRHL2Q6ISB3 625 aa8.64□□□□□ -1.03
CAPN3-216ENST00000567071 SPATA21Q7Z572 469 aa8.64□□□□□ -1.03
CAPN3-216ENST00000567071 WDR75Q8IWA0 830 aaKnown RBP8.64□□□□□ -1.03
CAPN3-216ENST00000567071 DDIASQ8IXT1 998 aa8.64□□□□□ -1.03
CAPN3-216ENST00000567071 RNF175Q8N4F7 328 aa8.64□□□□□ -1.03
CAPN3-216ENST00000567071 L3MBTL4Q8NA19 623 aa8.64□□□□□ -1.03
CAPN3-216ENST00000567071 TMEM52Q8NDY8 209 aa8.64□□□□□ -1.03
CAPN3-216ENST00000567071 OR6K3Q8NGY3 331 aa8.64□□□□□ -1.03
CAPN3-216ENST00000567071 METTL6Q8TCB7 284 aa8.64□□□□□ -1.03
CAPN3-216ENST00000567071 TWIST2Q8WVJ9 160 aa8.64□□□□□ -1.03
CAPN3-216ENST00000567071 GAL3ST3Q96A11 431 aa8.64□□□□□ -1.03
CAPN3-216ENST00000567071 PTCD3Q96EY7 689 aaKnown RBP8.64□□□□□ -1.03
CAPN3-216ENST00000567071 DGAT2Q96PD7 388 aa8.64□□□□□ -1.03
CAPN3-216ENST00000567071 CCT8L2Q96SF2 557 aa8.64□□□□□ -1.03
CAPN3-216ENST00000567071 SUCNR1Q9BXA5 334 aa8.64□□□□□ -1.03
CAPN3-216ENST00000567071 HDHD5Q9BXW7 423 aa8.64□□□□□ -1.03
CAPN3-216ENST00000567071 NUF2Q9BZD4 464 aa8.64□□□□□ -1.03
CAPN3-216ENST00000567071 OR2B2Q9GZK3 357 aa8.64□□□□□ -1.03
CAPN3-216ENST00000567071 RNF122Q9H9V4 155 aa8.64□□□□□ -1.03
CAPN3-216ENST00000567071 PELI2Q9HAT8 420 aa8.64□□□□□ -1.03
CAPN3-216ENST00000567071 FARSBQ9NSD9 589 aaKnown RBP8.64□□□□□ -1.03
CAPN3-216ENST00000567071 TAS2R10Q9NYW0 307 aa8.64□□□□□ -1.03
CAPN3-216ENST00000567071 PMF1-BGLAPU3KQ54 211 aa8.64□□□□□ -1.03
CAPN3-216ENST00000567071 GOLGA8QA0A0J9YX86 632 aa8.63□□□□□ -1.03
CAPN3-216ENST00000567071 GOLGA8OA6NCC3 632 aa8.63□□□□□ -1.03
CAPN3-216ENST00000567071 GOLGA8NF8WBI6 632 aa8.63□□□□□ -1.03
CAPN3-216ENST00000567071 MANBAO00462 879 aa8.63□□□□□ -1.03
CAPN3-216ENST00000567071 NDUFAB1O14561 156 aa8.63□□□□□ -1.03
CAPN3-216ENST00000567071 PIP5K1BO14986 540 aa8.63□□□□□ -1.03
CAPN3-216ENST00000567071 HDAC3O15379 428 aa8.63□□□□□ -1.03
CAPN3-216ENST00000567071 UGDHO60701 494 aa8.63□□□□□ -1.03
CAPN3-216ENST00000567071 ETHE1O95571 254 aa8.63□□□□□ -1.03
CAPN3-216ENST00000567071 FAM107AO95990 144 aa8.63□□□□□ -1.03
CAPN3-216ENST00000567071 CHEK2O96017 543 aa8.63□□□□□ -1.03
CAPN3-216ENST00000567071 SERPINA6P08185 405 aa8.63□□□□□ -1.03
CAPN3-216ENST00000567071 SMIM10L1P0DMW3 83 aa8.63□□□□□ -1.03
CAPN3-216ENST00000567071 IL32P24001 234 aa8.63□□□□□ -1.03
CAPN3-216ENST00000567071 ADH6P28332 368 aa8.63□□□□□ -1.03
CAPN3-216ENST00000567071 TTKP33981 857 aa8.63□□□□□ -1.03
CAPN3-216ENST00000567071 SCTRP47872 440 aa8.63□□□□□ -1.03
CAPN3-216ENST00000567071 ARFIP2P53365 341 aa8.63□□□□□ -1.03
CAPN3-216ENST00000567071 GFRA1P56159 465 aa8.63□□□□□ -1.03
CAPN3-216ENST00000567071 NRG3P56975 720 aa8.63□□□□□ -1.03
CAPN3-216ENST00000567071 REEP5Q00765 189 aa8.63□□□□□ -1.03
CAPN3-216ENST00000567071 CHRNB3Q05901 458 aa8.63□□□□□ -1.03
CAPN3-216ENST00000567071 BTKQ06187 659 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms