RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 TNFRSF12AQ9NP84 129 aa13.46□□□□□ -0.25
RNF40-209ENST00000566703 SH3BP4Q9P0V3 963 aa13.46□□□□□ -0.25
RNF40-209ENST00000566703 TMED5Q9Y3A6 229 aa13.46□□□□□ -0.25
RNF40-209ENST00000566703 EMC9Q9Y3B6 208 aa13.46□□□□□ -0.25
RNF40-209ENST00000566703 AZIN1O14977 448 aa13.45□□□□□ -0.26
RNF40-209ENST00000566703 ADAMDEC1O15204 470 aa13.45□□□□□ -0.26
RNF40-209ENST00000566703 AQP8O94778 261 aa13.45□□□□□ -0.26
RNF40-209ENST00000566703 SOX30O94993 753 aa13.45□□□□□ -0.26
RNF40-209ENST00000566703 OXSR1O95747 527 aaPredicted RBP13.45□□□□□ -0.26
RNF40-209ENST00000566703 FGF4P08620 206 aa13.45□□□□□ -0.26
RNF40-209ENST00000566703 LOXP28300 417 aaPredicted RBP13.45□□□□□ -0.26
RNF40-209ENST00000566703 CCKARP32238 428 aa13.45□□□□□ -0.26
RNF40-209ENST00000566703 EIF1AXP47813 144 aaKnown RBP13.45□□□□□ -0.26
RNF40-209ENST00000566703 SERPINB4P48594 390 aa13.45□□□□□ -0.26
RNF40-209ENST00000566703 PRKAG1P54619 331 aa13.45□□□□□ -0.26
RNF40-209ENST00000566703 PDE7AQ13946 482 aa13.45□□□□□ -0.26
RNF40-209ENST00000566703 MLC1Q15049 377 aa13.45□□□□□ -0.26
RNF40-209ENST00000566703 GTF2IRD2BQ6EKJ0 949 aa13.45□□□□□ -0.26
RNF40-209ENST00000566703 CLEC9AQ6UXN8 241 aa13.45□□□□□ -0.26
RNF40-209ENST00000566703 GTF2IRD2Q86UP8 949 aa13.45□□□□□ -0.26
RNF40-209ENST00000566703 EXOC3L1Q86VI1 746 aa13.45□□□□□ -0.26
RNF40-209ENST00000566703 CCDC63Q8NA47 563 aa13.45□□□□□ -0.26
RNF40-209ENST00000566703 SLC9A6Q92581 669 aa13.45□□□□□ -0.26
RNF40-209ENST00000566703 ADGRG7Q96K78 797 aa13.45□□□□□ -0.26
RNF40-209ENST00000566703 MS4A4EQ96PG1 132 aa13.45□□□□□ -0.26
RNF40-209ENST00000566703 OR10A4Q9H209 315 aa13.45□□□□□ -0.26
RNF40-209ENST00000566703 EQTNQ9NQ60 294 aa13.45□□□□□ -0.26
RNF40-209ENST00000566703 UBQLN4Q9NRR5 601 aa13.45□□□□□ -0.26
RNF40-209ENST00000566703 MCTS1Q9ULC4 181 aaKnown RBP13.45□□□□□ -0.26
RNF40-209ENST00000566703 VDAC3Q9Y277 283 aa13.45□□□□□ -0.26
RNF40-209ENST00000566703 ZFHX3Q15911 3703 aa13.44□□□□□ -0.26
RNF40-209ENST00000566703 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.44□□□□□ -0.26
RNF40-209ENST00000566703 A0A1W2PQD3 144 aa13.44□□□□□ -0.26
RNF40-209ENST00000566703 COPEO14579 308 aa13.44□□□□□ -0.26
RNF40-209ENST00000566703 EIF1AYO14602 144 aaKnown RBP13.44□□□□□ -0.26
RNF40-209ENST00000566703 TMCC2O75069 709 aa13.44□□□□□ -0.26
RNF40-209ENST00000566703 SS18L1O75177 396 aaPredicted RBP13.44□□□□□ -0.26
RNF40-209ENST00000566703 KCNK2O95069 426 aa13.44□□□□□ -0.26
RNF40-209ENST00000566703 CHEK2O96017 543 aa13.44□□□□□ -0.26
RNF40-209ENST00000566703 HEXAP06865 529 aa13.44□□□□□ -0.26
RNF40-209ENST00000566703 ALOX5P09917 674 aa13.44□□□□□ -0.26
RNF40-209ENST00000566703 SDC1P18827 310 aa13.44□□□□□ -0.26
RNF40-209ENST00000566703 PSMA4P25789 261 aaKnown RBP13.44□□□□□ -0.26
RNF40-209ENST00000566703 ASMTP46597 345 aa13.44□□□□□ -0.26
RNF40-209ENST00000566703 PRIM2P49643 509 aa13.44□□□□□ -0.26
RNF40-209ENST00000566703 CTBP2P56545 445 aa13.44□□□□□ -0.26
RNF40-209ENST00000566703 SLC18A2Q05940 514 aa13.44□□□□□ -0.26
RNF40-209ENST00000566703 RFTN2Q52LD8 501 aaPredicted RBP13.44□□□□□ -0.26
RNF40-209ENST00000566703 BEX5Q5H9J7 111 aa13.44□□□□□ -0.26
RNF40-209ENST00000566703 Q5PR19 223 aa13.44□□□□□ -0.26
RNF40-209ENST00000566703 EXOSC6Q5RKV6 272 aaKnown RBP13.44□□□□□ -0.26
RNF40-209ENST00000566703 PDSS1Q5T2R2 415 aa13.44□□□□□ -0.26
RNF40-209ENST00000566703 CLEC6AQ6EIG7 209 aa13.44□□□□□ -0.26
RNF40-209ENST00000566703 LRIG3Q6UXM1 1119 aa13.44□□□□□ -0.26
RNF40-209ENST00000566703 BEND4Q6ZU67 534 aa13.44□□□□□ -0.26
RNF40-209ENST00000566703 ESPNLQ6ZVH7 1005 aa13.44□□□□□ -0.26
RNF40-209ENST00000566703 ZNF550Q7Z398 422 aa13.44□□□□□ -0.26
RNF40-209ENST00000566703 R3HCC1LQ7Z5L2 792 aaKnown RBP13.44□□□□□ -0.26
RNF40-209ENST00000566703 SLC16A11Q8NCK7 471 aa13.44□□□□□ -0.26
RNF40-209ENST00000566703 OR10D3Q8NH80 312 aa13.44□□□□□ -0.26
RNF40-209ENST00000566703 CIDECQ96AQ7 238 aaPredicted RBP13.44□□□□□ -0.26
RNF40-209ENST00000566703 GIMAP5Q96F15 307 aa13.44□□□□□ -0.26
RNF40-209ENST00000566703 COX4I2Q96KJ9 171 aa13.44□□□□□ -0.26
RNF40-209ENST00000566703 CCL19Q99731 98 aa13.44□□□□□ -0.26
RNF40-209ENST00000566703 SMR3AQ99954 134 aa13.44□□□□□ -0.26
RNF40-209ENST00000566703 RHOXF2Q9BQY4 288 aa13.44□□□□□ -0.26
RNF40-209ENST00000566703 KLHL4Q9C0H6 718 aa13.44□□□□□ -0.26
RNF40-209ENST00000566703 UBTD1Q9HAC8 227 aa13.44□□□□□ -0.26
RNF40-209ENST00000566703 GIN1Q9NXP7 522 aa13.44□□□□□ -0.26
RNF40-209ENST00000566703 ACANP16112 2415 aa13.43□□□□□ -0.26
RNF40-209ENST00000566703 UQCRHLA0A096LP55 91 aa13.43□□□□□ -0.26
RNF40-209ENST00000566703 A0A1W2PRB8 838 aa13.43□□□□□ -0.26
RNF40-209ENST00000566703 SCDO00767 359 aa13.43□□□□□ -0.26
RNF40-209ENST00000566703 AKAP10O43572 662 aa13.43□□□□□ -0.26
RNF40-209ENST00000566703 TRIM13O60858 407 aa13.43□□□□□ -0.26
RNF40-209ENST00000566703 SYNGR4O95473 234 aa13.43□□□□□ -0.26
RNF40-209ENST00000566703 PLGP00747 810 aaPredicted RBP13.43□□□□□ -0.26
RNF40-209ENST00000566703 ACP2P11117 423 aa13.43□□□□□ -0.26
RNF40-209ENST00000566703 HPGDP15428 266 aa13.43□□□□□ -0.26
RNF40-209ENST00000566703 EIF1P41567 113 aaKnown RBP13.43□□□□□ -0.26
RNF40-209ENST00000566703 SLC6A8P48029 635 aa13.43□□□□□ -0.26
RNF40-209ENST00000566703 CTU2Q2VPK5 515 aaKnown RBP13.43□□□□□ -0.26
RNF40-209ENST00000566703 ZNF385BQ569K4 471 aa13.43□□□□□ -0.26
RNF40-209ENST00000566703 ANKRD26P1Q6NSI1 321 aa13.43□□□□□ -0.26
RNF40-209ENST00000566703 MFSD12Q6NUT3 480 aa13.43□□□□□ -0.26
RNF40-209ENST00000566703 STK32CQ86UX6 486 aa13.43□□□□□ -0.26
RNF40-209ENST00000566703 TRABD2AQ86V40 505 aa13.43□□□□□ -0.26
RNF40-209ENST00000566703 C10orf107Q8IVU9 208 aa13.43□□□□□ -0.26
RNF40-209ENST00000566703 NATD1Q8N6N6 113 aa13.43□□□□□ -0.26
RNF40-209ENST00000566703 OR2T11Q8NH01 316 aa13.43□□□□□ -0.26
RNF40-209ENST00000566703 OR2V1Q8NHB1 315 aa13.43□□□□□ -0.26
RNF40-209ENST00000566703 ARSGQ96EG1 525 aa13.43□□□□□ -0.26
RNF40-209ENST00000566703 TSSK3Q96PN8 268 aa13.43□□□□□ -0.26
RNF40-209ENST00000566703 GATA5Q9BWX5 397 aaPredicted RBP13.43□□□□□ -0.26
RNF40-209ENST00000566703 GSX2Q9BZM3 304 aa13.43□□□□□ -0.26
RNF40-209ENST00000566703 TUBB1Q9H4B7 451 aa13.43□□□□□ -0.26
RNF40-209ENST00000566703 MED17Q9NVC6 651 aa13.43□□□□□ -0.26
RNF40-209ENST00000566703 GPR52Q9Y2T5 361 aa13.43□□□□□ -0.26
RNF40-209ENST00000566703 DNAJC15Q9Y5T4 150 aa13.43□□□□□ -0.26
RNF40-209ENST00000566703 SHISA8B8ZZ34 492 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms