RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 HOXB6P17509 224 aaKnown RBP4.03□□□□□ -1.76
CNOT1-209ENST00000566240 PGCP20142 388 aa4.03□□□□□ -1.76
CNOT1-209ENST00000566240 CALB2P22676 271 aa4.03□□□□□ -1.76
CNOT1-209ENST00000566240 ATP5A1P25705 553 aaKnown RBP4.03□□□□□ -1.76
CNOT1-209ENST00000566240 CDH5P33151 784 aaPredicted RBP4.03□□□□□ -1.76
CNOT1-209ENST00000566240 TAGLN2P37802 199 aaKnown RBP4.03□□□□□ -1.76
CNOT1-209ENST00000566240 SULT1E1P49888 294 aa4.03□□□□□ -1.76
CNOT1-209ENST00000566240 MAP2K1Q02750 393 aaPredicted RBP4.03□□□□□ -1.76
CNOT1-209ENST00000566240 CYLC2Q14093 348 aaPredicted RBP4.03□□□□□ -1.76
CNOT1-209ENST00000566240 EXOC3L2Q2M3D2 409 aa4.03□□□□□ -1.76
CNOT1-209ENST00000566240 BOLA3Q53S33 107 aa4.03□□□□□ -1.76
CNOT1-209ENST00000566240 ZNF506Q5JVG8 444 aa4.03□□□□□ -1.76
CNOT1-209ENST00000566240 FAAP20Q6NZ36 180 aa4.03□□□□□ -1.76
CNOT1-209ENST00000566240 C16orf62Q7Z3J2 963 aa4.03□□□□□ -1.76
CNOT1-209ENST00000566240 VSTM4Q8IW00 320 aa4.03□□□□□ -1.76
CNOT1-209ENST00000566240 UBQLNLQ8IYU4 475 aa4.03□□□□□ -1.76
CNOT1-209ENST00000566240 CLDN19Q8N6F1 224 aa4.03□□□□□ -1.76
CNOT1-209ENST00000566240 BHLHE23Q8NDY6 225 aa4.03□□□□□ -1.76
CNOT1-209ENST00000566240 OR13C2Q8NGS9 318 aa4.03□□□□□ -1.76
CNOT1-209ENST00000566240 OR4Q3Q8NH05 313 aa4.03□□□□□ -1.76
CNOT1-209ENST00000566240 AMDHD1Q96NU7 426 aa4.03□□□□□ -1.76
CNOT1-209ENST00000566240 PANK3Q9H999 370 aa4.03□□□□□ -1.76
CNOT1-209ENST00000566240 FAM120CQ9NX05 1096 aaKnown RBP4.03□□□□□ -1.76
CNOT1-209ENST00000566240 RPH3ALQ9UNE2 315 aa4.03□□□□□ -1.76
CNOT1-209ENST00000566240 NTNG1Q9Y2I2 539 aa4.03□□□□□ -1.76
CNOT1-209ENST00000566240 NOTCH4Q99466 2003 aa4.03□□□□□ -1.76
CNOT1-209ENST00000566240 CEP164Q9UPV0 1460 aa4.03□□□□□ -1.76
CNOT1-209ENST00000566240 A0A1W2PNV4 684 aa4.02□□□□□ -1.77
CNOT1-209ENST00000566240 LCMT2O60294 686 aaKnown RBP4.02□□□□□ -1.77
CNOT1-209ENST00000566240 F10P00742 488 aa4.02□□□□□ -1.77
CNOT1-209ENST00000566240 IGFBP5P24593 272 aa4.02□□□□□ -1.77
CNOT1-209ENST00000566240 HPCAL1P37235 193 aa4.02□□□□□ -1.77
CNOT1-209ENST00000566240 GNPDA1P46926 289 aa4.02□□□□□ -1.77
CNOT1-209ENST00000566240 ERVK11-1P61568 191 aa4.02□□□□□ -1.77
CNOT1-209ENST00000566240 PAX8Q06710 450 aa4.02□□□□□ -1.77
CNOT1-209ENST00000566240 IL18R1Q13478 541 aa4.02□□□□□ -1.77
CNOT1-209ENST00000566240 CCDC183Q5T5S1 534 aa4.02□□□□□ -1.77
CNOT1-209ENST00000566240 LGSNQ5TDP6 509 aa4.02□□□□□ -1.77
CNOT1-209ENST00000566240 OR8G2PQ6IF36 304 aa4.02□□□□□ -1.77
CNOT1-209ENST00000566240 ACSM5Q6NUN0 579 aa4.02□□□□□ -1.77
CNOT1-209ENST00000566240 FAM71F2Q6NXP2 309 aa4.02□□□□□ -1.77
CNOT1-209ENST00000566240 KCNIP4Q6PIL6 250 aa4.02□□□□□ -1.77
CNOT1-209ENST00000566240 EFL1Q7Z2Z2 1120 aaKnown RBP4.02□□□□□ -1.77
CNOT1-209ENST00000566240 IFNEQ86WN2 208 aa4.02□□□□□ -1.77
CNOT1-209ENST00000566240 TMEM123Q8N131 208 aa4.02□□□□□ -1.77
CNOT1-209ENST00000566240 CSNK1G2-AS1Q8NCQ2 148 aa4.02□□□□□ -1.77
CNOT1-209ENST00000566240 STXBP6Q8NFX7 210 aa4.02□□□□□ -1.77
CNOT1-209ENST00000566240 ZNF671Q8TAW3 534 aa4.02□□□□□ -1.77
CNOT1-209ENST00000566240 PIGCQ92535 297 aa4.02□□□□□ -1.77
CNOT1-209ENST00000566240 PIWIL1Q96J94 861 aaKnown RBP4.02□□□□□ -1.77
CNOT1-209ENST00000566240 CNDP1Q96KN2 507 aa4.02□□□□□ -1.77
CNOT1-209ENST00000566240 C7orf34Q96L11 122 aa4.02□□□□□ -1.77
CNOT1-209ENST00000566240 C12orf66Q96MD2 445 aa4.02□□□□□ -1.77
CNOT1-209ENST00000566240 TGM7Q96PF1 710 aa4.02□□□□□ -1.77
CNOT1-209ENST00000566240 SLC6A7Q99884 636 aa4.02□□□□□ -1.77
CNOT1-209ENST00000566240 GON7Q9BXV9 100 aa4.02□□□□□ -1.77
CNOT1-209ENST00000566240 GCOM2Q9BZD3 368 aaPredicted RBP4.02□□□□□ -1.77
CNOT1-209ENST00000566240 CRNKL1Q9BZJ0 848 aaKnown RBP4.02□□□□□ -1.77
CNOT1-209ENST00000566240 ADNPQ9H2P0 1102 aa4.02□□□□□ -1.77
CNOT1-209ENST00000566240 RAB18Q9NP72 206 aa4.02□□□□□ -1.77
CNOT1-209ENST00000566240 PIPOXQ9P0Z9 390 aa4.02□□□□□ -1.77
CNOT1-209ENST00000566240 CFTRP13569 1480 aa4.01□□□□□ -1.77
CNOT1-209ENST00000566240 OR6C65A6NJZ3 312 aa4.01□□□□□ -1.77
CNOT1-209ENST00000566240 CCDC169A6NNP5 214 aa4.01□□□□□ -1.77
CNOT1-209ENST00000566240 NPIPA7E9PJI5 369 aa4.01□□□□□ -1.77
CNOT1-209ENST00000566240 AP3B1O00203 1094 aa4.01□□□□□ -1.77
CNOT1-209ENST00000566240 OR7A17O14581 309 aa4.01□□□□□ -1.77
CNOT1-209ENST00000566240 LRRTM2O43300 516 aa4.01□□□□□ -1.77
CNOT1-209ENST00000566240 SERPINB2P05120 415 aa4.01□□□□□ -1.77
CNOT1-209ENST00000566240 CAPN1P07384 714 aa4.01□□□□□ -1.77
CNOT1-209ENST00000566240 MELTFP08582 738 aa4.01□□□□□ -1.77
CNOT1-209ENST00000566240 RNF224P0DH78 156 aa4.01□□□□□ -1.77
CNOT1-209ENST00000566240 NPIPA8P0DM63 369 aa4.01□□□□□ -1.77
CNOT1-209ENST00000566240 AP3M2P53677 418 aa4.01□□□□□ -1.77
CNOT1-209ENST00000566240 DDX39BQ13838 428 aaKnown RBP4.01□□□□□ -1.77
CNOT1-209ENST00000566240 MXD4Q14582 209 aaPredicted RBP4.01□□□□□ -1.77
CNOT1-209ENST00000566240 MESDQ14696 234 aa4.01□□□□□ -1.77
CNOT1-209ENST00000566240 CYP51A1Q16850 503 aa4.01□□□□□ -1.77
CNOT1-209ENST00000566240 FILIP1LQ4L180 1135 aa4.01□□□□□ -1.77
CNOT1-209ENST00000566240 NHLRC3Q5JS37 347 aa4.01□□□□□ -1.77
CNOT1-209ENST00000566240 LEMD1Q68G75 181 aa4.01□□□□□ -1.77
CNOT1-209ENST00000566240 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.01□□□□□ -1.77
CNOT1-209ENST00000566240 ZSCAN25Q6NSZ9 544 aa4.01□□□□□ -1.77
CNOT1-209ENST00000566240 APTXQ7Z2E3 356 aaKnown RBP4.01□□□□□ -1.77
CNOT1-209ENST00000566240 TIPARPQ7Z3E1 657 aaKnown RBP4.01□□□□□ -1.77
CNOT1-209ENST00000566240 AENQ8WTP8 325 aaKnown RBP4.01□□□□□ -1.77
CNOT1-209ENST00000566240 TUBGCP3Q96CW5 907 aa4.01□□□□□ -1.77
CNOT1-209ENST00000566240 PELI1Q96FA3 418 aa4.01□□□□□ -1.77
CNOT1-209ENST00000566240 TMEM43Q9BTV4 400 aa4.01□□□□□ -1.77
CNOT1-209ENST00000566240 DUSP16Q9BY84 665 aa4.01□□□□□ -1.77
CNOT1-209ENST00000566240 EXOSC3Q9NQT5 275 aaKnown RBP4.01□□□□□ -1.77
CNOT1-209ENST00000566240 MDFICQ9P1T7 246 aa4.01□□□□□ -1.77
CNOT1-209ENST00000566240 NPIPA1Q9UND3 350 aa4.01□□□□□ -1.77
CNOT1-209ENST00000566240 NAALAD2Q9Y3Q0 740 aa4.01□□□□□ -1.77
CNOT1-209ENST00000566240 MAD1L1Q9Y6D9 718 aa4.01□□□□□ -1.77
CNOT1-209ENST00000566240 USP6P35125 1406 aa4.01□□□□□ -1.77
CNOT1-209ENST00000566240 ERICH3Q5RHP9 1530 aa4□□□□□ -1.77
CNOT1-209ENST00000566240 FRMPD4Q14CM0 1322 aa4□□□□□ -1.77
CNOT1-209ENST00000566240 TRAV26-1A0A087WT03 109 aa4□□□□□ -1.77
CNOT1-209ENST00000566240 ZNF487B1APH4 448 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms