RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 CDS1Q92903 461 aa11.61□□□□□ -0.55
SF3B3-206ENST00000565990 TMBIM1Q969X1 311 aa11.61□□□□□ -0.55
SF3B3-206ENST00000565990 SPACA9Q96E40 222 aaPredicted RBP11.61□□□□□ -0.55
SF3B3-206ENST00000565990 AURKBQ96GD4 344 aaPredicted RBP11.61□□□□□ -0.55
SF3B3-206ENST00000565990 MPP4Q96JB8 637 aa11.61□□□□□ -0.55
SF3B3-206ENST00000565990 SH3GL1Q99961 368 aa11.61□□□□□ -0.55
SF3B3-206ENST00000565990 TUBA1CQ9BQE3 449 aa11.61□□□□□ -0.55
SF3B3-206ENST00000565990 UTP23Q9BRU9 249 aaKnown RBP11.61□□□□□ -0.55
SF3B3-206ENST00000565990 BDH2Q9BUT1 245 aa11.61□□□□□ -0.55
SF3B3-206ENST00000565990 ALG2Q9H553 416 aa11.61□□□□□ -0.55
SF3B3-206ENST00000565990 KAT8Q9H7Z6 458 aaKnown RBP11.61□□□□□ -0.55
SF3B3-206ENST00000565990 IL1RL2Q9HB29 575 aa11.61□□□□□ -0.55
SF3B3-206ENST00000565990 Q9N2J8 555 aa11.61□□□□□ -0.55
SF3B3-206ENST00000565990 EQTNQ9NQ60 294 aa11.61□□□□□ -0.55
SF3B3-206ENST00000565990 OLAHQ9NV23 265 aa11.61□□□□□ -0.55
SF3B3-206ENST00000565990 CMTM6Q9NX76 183 aa11.61□□□□□ -0.55
SF3B3-206ENST00000565990 PLA2G3Q9NZ20 509 aa11.61□□□□□ -0.55
SF3B3-206ENST00000565990 ABI3Q9P2A4 366 aa11.61□□□□□ -0.55
SF3B3-206ENST00000565990 CORO2BQ9UQ03 480 aa11.61□□□□□ -0.55
SF3B3-206ENST00000565990 NINQ8N4C6 2090 aa11.6□□□□□ -0.55
SF3B3-206ENST00000565990 TCRBV5S2A0A599 114 aa11.6□□□□□ -0.55
SF3B3-206ENST00000565990 GXYLT2A0PJZ3 443 aa11.6□□□□□ -0.55
SF3B3-206ENST00000565990 EVPLLA8MZ36 301 aa11.6□□□□□ -0.55
SF3B3-206ENST00000565990 ABCB7O75027 752 aa11.6□□□□□ -0.55
SF3B3-206ENST00000565990 PPM1BO75688 479 aa11.6□□□□□ -0.55
SF3B3-206ENST00000565990 PRSS23O95084 383 aa11.6□□□□□ -0.55
SF3B3-206ENST00000565990 TFPTP0C1Z6 253 aa11.6□□□□□ -0.55
SF3B3-206ENST00000565990 FAM87AP0C7U9 286 aa11.6□□□□□ -0.55
SF3B3-206ENST00000565990 OR12D1P0DN82 309 aa11.6□□□□□ -0.55
SF3B3-206ENST00000565990 CDH2P19022 906 aaPredicted RBP11.6□□□□□ -0.55
SF3B3-206ENST00000565990 LCN1P31025 176 aa11.6□□□□□ -0.55
SF3B3-206ENST00000565990 SOX3P41225 446 aa11.6□□□□□ -0.55
SF3B3-206ENST00000565990 GSK3BP49841 420 aa11.6□□□□□ -0.55
SF3B3-206ENST00000565990 TNFSF10P50591 281 aa11.6□□□□□ -0.55
SF3B3-206ENST00000565990 CASP9P55211 416 aa11.6□□□□□ -0.55
SF3B3-206ENST00000565990 MERTKQ12866 999 aa11.6□□□□□ -0.55
SF3B3-206ENST00000565990 MAPK11Q15759 364 aa11.6□□□□□ -0.55
SF3B3-206ENST00000565990 DECR1Q16698 335 aa11.6□□□□□ -0.55
SF3B3-206ENST00000565990 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.6□□□□□ -0.55
SF3B3-206ENST00000565990 ZBED5Q49AG3 693 aa11.6□□□□□ -0.55
SF3B3-206ENST00000565990 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.6□□□□□ -0.55
SF3B3-206ENST00000565990 TMEM81Q6P7N7 255 aa11.6□□□□□ -0.55
SF3B3-206ENST00000565990 DNAJC14Q6Y2X3 702 aaPredicted RBP11.6□□□□□ -0.55
SF3B3-206ENST00000565990 SERPINA11Q86U17 422 aa11.6□□□□□ -0.55
SF3B3-206ENST00000565990 C10orf111Q8N326 155 aa11.6□□□□□ -0.55
SF3B3-206ENST00000565990 METTL25Q8N6Q8 603 aa11.6□□□□□ -0.55
SF3B3-206ENST00000565990 FAM156AQ8NDB6 213 aa11.6□□□□□ -0.55
SF3B3-206ENST00000565990 XAGE5Q8WWM1 108 aa11.6□□□□□ -0.55
SF3B3-206ENST00000565990 ASB15Q8WXK1 588 aa11.6□□□□□ -0.55
SF3B3-206ENST00000565990 TM9SF4Q92544 642 aa11.6□□□□□ -0.55
SF3B3-206ENST00000565990 DIO2Q92813 273 aa11.6□□□□□ -0.55
SF3B3-206ENST00000565990 HGDQ93099 445 aa11.6□□□□□ -0.55
SF3B3-206ENST00000565990 OMA1Q96E52 524 aa11.6□□□□□ -0.55
SF3B3-206ENST00000565990 SECISBP2Q96T21 854 aaKnown RBP11.6□□□□□ -0.55
SF3B3-206ENST00000565990 SDF2Q99470 211 aa11.6□□□□□ -0.55
SF3B3-206ENST00000565990 KCTD14Q9BQ13 255 aaPredicted RBP11.6□□□□□ -0.55
SF3B3-206ENST00000565990 ARHGAP9Q9BRR9 750 aa11.6□□□□□ -0.55
SF3B3-206ENST00000565990 ADI1Q9BV57 179 aa11.6□□□□□ -0.55
SF3B3-206ENST00000565990 OSBPL10Q9BXB5 764 aa11.6□□□□□ -0.55
SF3B3-206ENST00000565990 GRIP2Q9C0E4 1043 aa11.6□□□□□ -0.55
SF3B3-206ENST00000565990 SAP130Q9H0E3 1048 aa11.6□□□□□ -0.55
SF3B3-206ENST00000565990 MRTO4Q9UKD2 239 aaKnown RBP11.6□□□□□ -0.55
SF3B3-206ENST00000565990 LIPT1Q9Y234 373 aa11.6□□□□□ -0.55
SF3B3-206ENST00000565990 OR10H1Q9Y4A9 318 aa11.6□□□□□ -0.55
SF3B3-206ENST00000565990 PCDHGB6Q9Y5F9 930 aa11.6□□□□□ -0.55
SF3B3-206ENST00000565990 CEPT1Q9Y6K0 416 aa11.6□□□□□ -0.55
SF3B3-206ENST00000565990 PIEZO2Q9H5I5 2752 aa11.6□□□□□ -0.55
SF3B3-206ENST00000565990 OR5H15A6NDH6 313 aa11.59□□□□□ -0.55
SF3B3-206ENST00000565990 DEAF1O75398 565 aaPredicted RBP11.59□□□□□ -0.55
SF3B3-206ENST00000565990 TRMUO75648 421 aaKnown RBP11.59□□□□□ -0.55
SF3B3-206ENST00000565990 TIPRLO75663 272 aa11.59□□□□□ -0.55
SF3B3-206ENST00000565990 AK1P00568 194 aa11.59□□□□□ -0.55
SF3B3-206ENST00000565990 LDLRP01130 860 aa11.59□□□□□ -0.55
SF3B3-206ENST00000565990 IGKV1D-16P01601 117 aa11.59□□□□□ -0.55
SF3B3-206ENST00000565990 ETFAP13804 333 aa11.59□□□□□ -0.55
SF3B3-206ENST00000565990 MSX2P35548 267 aaPredicted RBP11.59□□□□□ -0.55
SF3B3-206ENST00000565990 CAPGP40121 348 aa11.59□□□□□ -0.55
SF3B3-206ENST00000565990 CRATP43155 626 aa11.59□□□□□ -0.55
SF3B3-206ENST00000565990 KHKP50053 298 aa11.59□□□□□ -0.55
SF3B3-206ENST00000565990 ANXA11P50995 505 aaKnown RBP11.59□□□□□ -0.55
SF3B3-206ENST00000565990 PSMD4P55036 377 aaKnown RBP11.59□□□□□ -0.55
SF3B3-206ENST00000565990 POU6F2P78424 691 aaPredicted RBP11.59□□□□□ -0.55
SF3B3-206ENST00000565990 SELPLGQ14242 412 aa11.59□□□□□ -0.55
SF3B3-206ENST00000565990 CAPRIN1Q14444 709 aaKnown RBP11.59□□□□□ -0.55
SF3B3-206ENST00000565990 NNATQ16517 81 aa11.59□□□□□ -0.55
SF3B3-206ENST00000565990 SPINK14Q6IE38 97 aa11.59□□□□□ -0.55
SF3B3-206ENST00000565990 TNFAIP8L2Q6P589 184 aaPredicted RBP11.59□□□□□ -0.55
SF3B3-206ENST00000565990 IL20RBQ6UXL0 311 aa11.59□□□□□ -0.55
SF3B3-206ENST00000565990 Q6ZS92 163 aa11.59□□□□□ -0.55
SF3B3-206ENST00000565990 SZRD1Q7Z422 152 aa11.59□□□□□ -0.55
SF3B3-206ENST00000565990 PATL1Q86TB9 770 aaKnown RBP11.59□□□□□ -0.55
SF3B3-206ENST00000565990 CALHM3Q86XJ0 350 aa11.59□□□□□ -0.55
SF3B3-206ENST00000565990 ZADH2Q8N4Q0 377 aa11.59□□□□□ -0.55
SF3B3-206ENST00000565990 DHRSXQ8N5I4 330 aa11.59□□□□□ -0.55
SF3B3-206ENST00000565990 RBMXL3Q8N7X1 1067 aaKnown RBP11.59□□□□□ -0.55
SF3B3-206ENST00000565990 LSM14AQ8ND56 463 aaKnown RBP11.59□□□□□ -0.55
SF3B3-206ENST00000565990 PAQR8Q8TEZ7 354 aa11.59□□□□□ -0.55
SF3B3-206ENST00000565990 PMM1Q92871 262 aa11.59□□□□□ -0.55
SF3B3-206ENST00000565990 RAB8BQ92930 207 aa11.59□□□□□ -0.55
SF3B3-206ENST00000565990 SCMH1Q96GD3 660 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms