RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 FGL2Q14314 439 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 NANOGP8Q6NSW7 305 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 JMJD6Q6NYC1 403 aaPredicted RBP3.16□□□□□ -1.9
CHD9-213ENST00000564845 NXPE4Q6UWF7 544 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 CLEC14AQ86T13 490 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 IQCHQ86VS3 1027 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 DNAJC5GQ8N7S2 189 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 BMPERQ8N8U9 685 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 ZNF709Q8N972 641 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 OR2AP1Q8NGE2 309 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 PROKR1Q8TCW9 393 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 EXOSC8Q96B26 276 aaKnown RBP3.16□□□□□ -1.9
CHD9-213ENST00000564845 COQ8BQ96D53 544 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 TGM7Q96PF1 710 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 ATOH8Q96SQ7 321 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 GHITMQ9H3K2 345 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 NANOGQ9H9S0 305 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 P2RX2Q9UBL9 471 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 KLF15Q9UIH9 416 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 LHX6Q9UPM6 363 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 ANKRD34BA5PLL1 514 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 A6NIZ1 184 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 LRRC30A6NM36 301 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 C4orf51C9J302 202 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 PLRG1O43660 514 aaKnown RBP3.16□□□□□ -1.9
CHD9-213ENST00000564845 EIF1P41567 113 aaKnown RBP3.16□□□□□ -1.9
CHD9-213ENST00000564845 GLP1RP43220 463 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 GRK6P43250 576 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 RAP1BP61224 184 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 RAP1AP62834 184 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 MEF2DQ14814 521 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 MYLK3Q32MK0 819 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 GPR139Q6DWJ6 353 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 PAPD4Q6PIY7 484 aaKnown RBP3.16□□□□□ -1.9
CHD9-213ENST00000564845 GDPD4Q6W3E5 623 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 ZNF517Q6ZMY9 492 aaPredicted RBP3.16□□□□□ -1.9
CHD9-213ENST00000564845 C16orf47Q6ZP98 133 aaPredicted RBP3.16□□□□□ -1.9
CHD9-213ENST00000564845 SNX20Q7Z614 316 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 KLBQ86Z14 1044 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 UMODL1-AS1Q8N2C9 162 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 SLC25A43Q8WUT9 341 aaPredicted RBP3.16□□□□□ -1.9
CHD9-213ENST00000564845 ZNF559Q9BR84 538 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 PBDC1Q9BVG4 233 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 DERL2Q9GZP9 239 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 SLC22A4Q9H015 551 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 RGCCQ9H4X1 137 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 SLC25A37Q9NYZ2 338 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 FZD4Q9ULV1 537 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 C1orf226A1L170 272 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 PRSS23O95084 383 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 TRBC1P01850 177 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 CSTBP04080 98 aaKnown RBP3.15□□□□□ -1.9
CHD9-213ENST00000564845 IL3RAP26951 378 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 THBS3P49746 956 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 GALK1P51570 392 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 CLCNKAP51800 687 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 CD81P60033 236 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 HERVK_113P63132 956 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 PUM1Q14671 1186 aaKnown RBP eCLIP3.15□□□□□ -1.95e-7■■□□□ 11.8
CHD9-213ENST00000564845 GNMTQ14749 295 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 AMZ1Q400G9 498 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 ETFRF1Q6IPR1 90 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 TMEM92Q6UXU6 159 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 TMEM64Q6YI46 380 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 PIWIL3Q7Z3Z3 882 aaKnown RBP3.15□□□□□ -1.9
CHD9-213ENST00000564845 BTLAQ7Z6A9 289 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 UBALD2Q8IYN6 164 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 NXPE1Q8N323 547 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 CBR4Q8N4T8 237 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 FNDC11Q9BVV2 318 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 ERVK-6Q9BXR3 956 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 SLC6A15Q9H2J7 730 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 RHOFQ9HBH0 211 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 TBCCD1Q9NVR7 557 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 KCNE3Q9Y6H6 103 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 ASCC3Q8N3C0 2202 aaKnown RBP3.15□□□□□ -1.9
CHD9-213ENST00000564845 A8MUA0 341 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 SOX1O00570 391 aaPredicted RBP3.15□□□□□ -1.9
CHD9-213ENST00000564845 TOX3O15405 576 aaPredicted RBP3.15□□□□□ -1.9
CHD9-213ENST00000564845 TBX1O43435 398 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 JRKO75564 520 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 SPDEFO95238 335 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 HLA-DPB1P04440 258 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 TP53P04637 393 aaPredicted RBP3.15□□□□□ -1.9
CHD9-213ENST00000564845 ALDOBP05062 364 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 S100A6P06703 90 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 SNRPB2P08579 225 aaKnown RBP3.15□□□□□ -1.9
CHD9-213ENST00000564845 HOXD4P09016 255 aaPredicted RBP3.15□□□□□ -1.9
CHD9-213ENST00000564845 SELEP16581 610 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 GPR1P46091 355 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 PPP5CP53041 499 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 ERVK-21P61565 698 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 CSNK2A1P68400 391 aaPredicted RBP3.15□□□□□ -1.9
CHD9-213ENST00000564845 DUSP2Q05923 314 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 MAP4K2Q12851 820 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 GPR50Q13585 617 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 KCNAB1Q14722 419 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 LTB4RQ15722 352 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 MSMO1Q15800 293 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 FAM74A1Q5RGS3 127 aa3.15□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms