RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 TBXA2RP21731 343 aa21.43■■□□□ 1.02
NME3-206ENST00000564252 MANFP55145 182 aaKnown RBP21.43■■□□□ 1.02
NME3-206ENST00000564252 RPL38P63173 70 aaKnown RBP21.43■■□□□ 1.02
NME3-206ENST00000564252 SLC18A2Q05940 514 aa21.43■■□□□ 1.02
NME3-206ENST00000564252 PCLAFQ15004 111 aa21.43■■□□□ 1.02
NME3-206ENST00000564252 SGCBQ16585 318 aa21.43■■□□□ 1.02
NME3-206ENST00000564252 RFTN2Q52LD8 501 aaPredicted RBP21.43■■□□□ 1.02
NME3-206ENST00000564252 C22orf34Q6ZV56 151 aa21.43■■□□□ 1.02
NME3-206ENST00000564252 ZAR1Q86SH2 424 aa21.43■■□□□ 1.02
NME3-206ENST00000564252 C4orf33Q8N1A6 199 aa21.43■■□□□ 1.02
NME3-206ENST00000564252 EIF1ADQ8N9N8 165 aaKnown RBP21.43■■□□□ 1.02
NME3-206ENST00000564252 SLC16A11Q8NCK7 471 aa21.43■■□□□ 1.02
NME3-206ENST00000564252 CLHC1Q8NHS4 586 aa21.43■■□□□ 1.02
NME3-206ENST00000564252 FBXO30Q8TB52 745 aa21.43■■□□□ 1.02
NME3-206ENST00000564252 MS4A4EQ96PG1 132 aa21.43■■□□□ 1.02
NME3-206ENST00000564252 NPAS1Q99742 590 aa21.43■■□□□ 1.02
NME3-206ENST00000564252 PIP5K1AQ99755 562 aa21.43■■□□□ 1.02
NME3-206ENST00000564252 GATA5Q9BWX5 397 aaPredicted RBP21.43■■□□□ 1.02
NME3-206ENST00000564252 SH3BP4Q9P0V3 963 aa21.43■■□□□ 1.02
NME3-206ENST00000564252 BAIAP2L1Q9UHR4 511 aa21.43■■□□□ 1.02
NME3-206ENST00000564252 A0A087WZY1 265 aa21.42■■□□□ 1.02
NME3-206ENST00000564252 EIF1AYO14602 144 aaKnown RBP21.42■■□□□ 1.02
NME3-206ENST00000564252 LSM1O15116 133 aaKnown RBP21.42■■□□□ 1.02
NME3-206ENST00000564252 NDUFB5O43674 189 aa21.42■■□□□ 1.02
NME3-206ENST00000564252 KCNK2O95069 426 aa21.42■■□□□ 1.02
NME3-206ENST00000564252 LOXP28300 417 aaPredicted RBP21.42■■□□□ 1.02
NME3-206ENST00000564252 EIF1AXP47813 144 aaKnown RBP21.42■■□□□ 1.02
NME3-206ENST00000564252 SLC6A8P48029 635 aa21.42■■□□□ 1.02
NME3-206ENST00000564252 CPEB4Q17RY0 729 aaKnown RBP eCLIP21.42■■□□□ 1.02
NME3-206ENST00000564252 KANK2Q63ZY3 851 aa21.42■■□□□ 1.02
NME3-206ENST00000564252 MFSD12Q6NUT3 480 aa21.42■■□□□ 1.02
NME3-206ENST00000564252 FIGNL1Q6PIW4 674 aa21.42■■□□□ 1.02
NME3-206ENST00000564252 SZRD1Q7Z422 152 aa21.42■■□□□ 1.02
NME3-206ENST00000564252 LRRC75A-AS1Q8N1F1 130 aa21.42■■□□□ 1.02
NME3-206ENST00000564252 GTPBP8Q8N3Z3 284 aaPredicted RBP21.42■■□□□ 1.02
NME3-206ENST00000564252 ADGRG7Q96K78 797 aa21.42■■□□□ 1.02
NME3-206ENST00000564252 HS3ST6Q96QI5 342 aa21.42■■□□□ 1.02
NME3-206ENST00000564252 IQCGQ9H095 443 aaKnown RBP21.42■■□□□ 1.02
NME3-206ENST00000564252 ACSS1Q9NUB1 689 aaPredicted RBP21.42■■□□□ 1.02
NME3-206ENST00000564252 STOML1Q9UBI4 398 aa21.42■■□□□ 1.02
NME3-206ENST00000564252 DNAJC15Q9Y5T4 150 aa21.42■■□□□ 1.02
NME3-206ENST00000564252 INHBBP09529 407 aa21.41■■□□□ 1.02
NME3-206ENST00000564252 LINC00032P0C843 101 aa21.41■■□□□ 1.02
NME3-206ENST00000564252 PSMA4P25789 261 aaKnown RBP21.41■■□□□ 1.02
NME3-206ENST00000564252 ACKR1Q16570 336 aa21.41■■□□□ 1.02
NME3-206ENST00000564252 DUSP5Q16690 384 aa21.41■■□□□ 1.02
NME3-206ENST00000564252 CTU2Q2VPK5 515 aaKnown RBP21.41■■□□□ 1.02
NME3-206ENST00000564252 EXOSC6Q5RKV6 272 aaKnown RBP21.41■■□□□ 1.02
NME3-206ENST00000564252 GATSQ8NAP1 163 aa21.41■■□□□ 1.02
NME3-206ENST00000564252 OR6Y1Q8NGX8 325 aa21.41■■□□□ 1.02
NME3-206ENST00000564252 OR10D3Q8NH80 312 aa21.41■■□□□ 1.02
NME3-206ENST00000564252 PIGTQ969N2 578 aa21.41■■□□□ 1.02
NME3-206ENST00000564252 C16orf58Q96GQ5 468 aa21.41■■□□□ 1.02
NME3-206ENST00000564252 ZC3HAV1LQ96H79 300 aaKnown RBP21.41■■□□□ 1.02
NME3-206ENST00000564252 TRMOQ9BU70 441 aa21.41■■□□□ 1.02
NME3-206ENST00000564252 UBTD1Q9HAC8 227 aa21.41■■□□□ 1.02
NME3-206ENST00000564252 HHATLQ9HCP6 504 aa21.41■■□□□ 1.02
NME3-206ENST00000564252 FBXO34Q9NWN3 711 aa21.41■■□□□ 1.02
NME3-206ENST00000564252 MID2Q9UJV3 735 aa21.41■■□□□ 1.02
NME3-206ENST00000564252 TMED5Q9Y3A6 229 aa21.41■■□□□ 1.02
NME3-206ENST00000564252 ARID1AO14497 2285 aa21.41■■□□□ 1.02
NME3-206ENST00000564252 RAI1Q7Z5J4 1906 aaPredicted RBP21.41■■□□□ 1.02
NME3-206ENST00000564252 C7orf72A4D263 438 aa21.4■■□□□ 1.02
NME3-206ENST00000564252 ARHGEF9O43307 516 aa21.4■■□□□ 1.02
NME3-206ENST00000564252 TRIM13O60858 407 aa21.4■■□□□ 1.02
NME3-206ENST00000564252 SMPD2O60906 423 aa21.4■■□□□ 1.02
NME3-206ENST00000564252 LTBQ06643 244 aa21.4■■□□□ 1.02
NME3-206ENST00000564252 PLPPR5Q32ZL2 321 aa21.4■■□□□ 1.02
NME3-206ENST00000564252 Q5PR19 223 aa21.4■■□□□ 1.02
NME3-206ENST00000564252 PPP4R4Q6NUP7 873 aa21.4■■□□□ 1.02
NME3-206ENST00000564252 WDR75Q8IWA0 830 aaKnown RBP21.4■■□□□ 1.02
NME3-206ENST00000564252 OR6K3Q8NGY3 331 aa21.4■■□□□ 1.02
NME3-206ENST00000564252 ACTRT2Q8TDY3 377 aa21.4■■□□□ 1.02
NME3-206ENST00000564252 CAVIN3Q969G5 261 aa21.4■■□□□ 1.02
NME3-206ENST00000564252 ZBTB8AQ96BR9 441 aa21.4■■□□□ 1.02
NME3-206ENST00000564252 GMPPAQ96IJ6 420 aaPredicted RBP21.4■■□□□ 1.02
NME3-206ENST00000564252 KLHDC3Q9BQ90 382 aa21.4■■□□□ 1.02
NME3-206ENST00000564252 PRRG4Q9BZD6 226 aa21.4■■□□□ 1.02
NME3-206ENST00000564252 KLHL4Q9C0H6 718 aa21.4■■□□□ 1.02
NME3-206ENST00000564252 PLSCR4Q9NRQ2 329 aa21.4■■□□□ 1.02
NME3-206ENST00000564252 CLEC4AQ9UMR7 237 aa21.4■■□□□ 1.02
NME3-206ENST00000564252 EMC9Q9Y3B6 208 aa21.4■■□□□ 1.02
NME3-206ENST00000564252 A0A1W2PRB8 838 aa21.39■■□□□ 1.01
NME3-206ENST00000564252 SS18L1O75177 396 aaPredicted RBP21.39■■□□□ 1.01
NME3-206ENST00000564252 CHEK2O96017 543 aa21.39■■□□□ 1.01
NME3-206ENST00000564252 BCKDHAP12694 445 aa21.39■■□□□ 1.01
NME3-206ENST00000564252 EFNA1P20827 205 aaPredicted RBP21.39■■□□□ 1.01
NME3-206ENST00000564252 FPR1P21462 350 aa21.39■■□□□ 1.01
NME3-206ENST00000564252 ADSLP30566 484 aaPredicted RBP21.39■■□□□ 1.01
NME3-206ENST00000564252 LCN1P31025 176 aa21.39■■□□□ 1.01
NME3-206ENST00000564252 EXOC3L2Q2M3D2 409 aa21.39■■□□□ 1.01
NME3-206ENST00000564252 GALNTL6Q49A17 601 aa21.39■■□□□ 1.01
NME3-206ENST00000564252 ANKRD34AQ69YU3 496 aa21.39■■□□□ 1.01
NME3-206ENST00000564252 ZCCHC12Q6PEW1 402 aa21.39■■□□□ 1.01
NME3-206ENST00000564252 Q71RC1 249 aaPredicted RBP21.39■■□□□ 1.01
NME3-206ENST00000564252 MTERF3Q96E29 417 aa21.39■■□□□ 1.01
NME3-206ENST00000564252 OTUB1Q96FW1 271 aaPredicted RBP21.39■■□□□ 1.01
NME3-206ENST00000564252 RNF145Q96MT1 663 aa21.39■■□□□ 1.01
NME3-206ENST00000564252 UBQLN4Q9NRR5 601 aa21.39■■□□□ 1.01
NME3-206ENST00000564252 SIRT3Q9NTG7 399 aaPredicted RBP21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms