RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 DRD3P35462 400 aa4.27□□□□□ -1.73
LINC00254-201ENST00000563416 PTGER3P43115 390 aa4.27□□□□□ -1.73
LINC00254-201ENST00000563416 NUMBP49757 651 aa4.27□□□□□ -1.73
LINC00254-201ENST00000563416 NDST2P52849 883 aa4.27□□□□□ -1.73
LINC00254-201ENST00000563416 GMFBP60983 142 aa4.27□□□□□ -1.73
LINC00254-201ENST00000563416 SNRPD1P62314 119 aaKnown RBP4.27□□□□□ -1.73
LINC00254-201ENST00000563416 TRA2AQ13595 282 aaKnown RBP eCLIP4.27□□□□□ -1.73
LINC00254-201ENST00000563416 GAMTQ14353 236 aa4.27□□□□□ -1.73
LINC00254-201ENST00000563416 PDK1Q15118 436 aa4.27□□□□□ -1.73
LINC00254-201ENST00000563416 CST6Q15828 149 aa4.27□□□□□ -1.73
LINC00254-201ENST00000563416 LPAL2Q16609 132 aa4.27□□□□□ -1.73
LINC00254-201ENST00000563416 IQCCQ4KMZ1 466 aa4.27□□□□□ -1.73
LINC00254-201ENST00000563416 BOLA3Q53S33 107 aa4.27□□□□□ -1.73
LINC00254-201ENST00000563416 TCTE1Q5JU00 501 aa4.27□□□□□ -1.73
LINC00254-201ENST00000563416 RWDD4Q6NW29 188 aaKnown RBP4.27□□□□□ -1.73
LINC00254-201ENST00000563416 C22orf39Q6P5X5 142 aa4.27□□□□□ -1.73
LINC00254-201ENST00000563416 TMPRSS11FQ6ZWK6 438 aa4.27□□□□□ -1.73
LINC00254-201ENST00000563416 LPCAT2Q7L5N7 544 aa4.27□□□□□ -1.73
LINC00254-201ENST00000563416 SLC16A9Q7RTY1 509 aa4.27□□□□□ -1.73
LINC00254-201ENST00000563416 CACUL1Q86Y37 369 aa4.27□□□□□ -1.73
LINC00254-201ENST00000563416 CFAP206Q8IYR0 622 aa4.27□□□□□ -1.73
LINC00254-201ENST00000563416 STK40Q8N2I9 435 aa4.27□□□□□ -1.73
LINC00254-201ENST00000563416 DCLK2Q8N568 766 aa4.27□□□□□ -1.73
LINC00254-201ENST00000563416 NPWQ8N729 165 aa4.27□□□□□ -1.73
LINC00254-201ENST00000563416 ZNF540Q8NDQ6 660 aa4.27□□□□□ -1.73
LINC00254-201ENST00000563416 OR2A12Q8NGT7 310 aa4.27□□□□□ -1.73
LINC00254-201ENST00000563416 GRHL3Q8TE85 626 aa4.27□□□□□ -1.73
LINC00254-201ENST00000563416 OR8D1Q8WZ84 308 aa4.27□□□□□ -1.73
LINC00254-201ENST00000563416 ISG20Q96AZ6 181 aaKnown RBP4.27□□□□□ -1.73
LINC00254-201ENST00000563416 FAF2Q96CS3 445 aa4.27□□□□□ -1.73
LINC00254-201ENST00000563416 GMPPAQ96IJ6 420 aaPredicted RBP4.27□□□□□ -1.73
LINC00254-201ENST00000563416 CSPG4P5Q96PW8 444 aa4.27□□□□□ -1.73
LINC00254-201ENST00000563416 OSBPL8Q9BZF1 889 aa4.27□□□□□ -1.73
LINC00254-201ENST00000563416 GFRA4Q9GZZ7 299 aa4.27□□□□□ -1.73
LINC00254-201ENST00000563416 PDFQ9HBH1 243 aa4.27□□□□□ -1.73
LINC00254-201ENST00000563416 SGK2Q9HBY8 427 aa4.27□□□□□ -1.73
LINC00254-201ENST00000563416 ZDHHC18Q9NUE0 388 aa4.27□□□□□ -1.73
LINC00254-201ENST00000563416 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.27□□□□□ -1.73
LINC00254-201ENST00000563416 PCSK1NQ9UHG2 260 aa4.27□□□□□ -1.73
LINC00254-201ENST00000563416 TRMT6Q9UJA5 497 aaKnown RBP4.27□□□□□ -1.73
LINC00254-201ENST00000563416 PILRBQ9UKJ0 227 aa4.27□□□□□ -1.73
LINC00254-201ENST00000563416 TEX264Q9Y6I9 313 aa4.27□□□□□ -1.73
LINC00254-201ENST00000563416 SPTBN2O15020 2390 aa4.26□□□□□ -1.73
LINC00254-201ENST00000563416 RP1P56715 2156 aa4.26□□□□□ -1.73
LINC00254-201ENST00000563416 A0A087WW49 117 aa4.26□□□□□ -1.73
LINC00254-201ENST00000563416 FEZF1A0PJY2 475 aa4.26□□□□□ -1.73
LINC00254-201ENST00000563416 FAM149AA5PLN7 773 aa4.26□□□□□ -1.73
LINC00254-201ENST00000563416 BTNL10A8MVZ5 291 aa4.26□□□□□ -1.73
LINC00254-201ENST00000563416 ZNF487B1APH4 448 aa4.26□□□□□ -1.73
LINC00254-201ENST00000563416 RAD51DO75771 328 aa4.26□□□□□ -1.73
LINC00254-201ENST00000563416 SEMA4FO95754 770 aa4.26□□□□□ -1.73
LINC00254-201ENST00000563416 GSRP00390 522 aa4.26□□□□□ -1.73
LINC00254-201ENST00000563416 IGHV4-34P06331 123 aa4.26□□□□□ -1.73
LINC00254-201ENST00000563416 KRT7P08729 469 aa4.26□□□□□ -1.73
LINC00254-201ENST00000563416 ZNF806P0C7X5 589 aa4.26□□□□□ -1.73
LINC00254-201ENST00000563416 SAGP10523 405 aaPredicted RBP4.26□□□□□ -1.73
LINC00254-201ENST00000563416 AHCYP23526 432 aa4.26□□□□□ -1.73
LINC00254-201ENST00000563416 AZGP1P25311 298 aaKnown RBP4.26□□□□□ -1.73
LINC00254-201ENST00000563416 CHRNA3P32297 505 aa4.26□□□□□ -1.73
LINC00254-201ENST00000563416 CYLC1P35663 651 aaPredicted RBP4.26□□□□□ -1.73
LINC00254-201ENST00000563416 ACAA2P42765 397 aaKnown RBP4.26□□□□□ -1.73
LINC00254-201ENST00000563416 MAGEA1P43355 309 aa4.26□□□□□ -1.73
LINC00254-201ENST00000563416 IER3P46695 156 aa4.26□□□□□ -1.73
LINC00254-201ENST00000563416 RABIFP47224 123 aa4.26□□□□□ -1.73
LINC00254-201ENST00000563416 PSMD8P48556 350 aa4.26□□□□□ -1.73
LINC00254-201ENST00000563416 CAMLGP49069 296 aa4.26□□□□□ -1.73
LINC00254-201ENST00000563416 DHPSP49366 369 aaPredicted RBP4.26□□□□□ -1.73
LINC00254-201ENST00000563416 CCNHP51946 323 aaPredicted RBP4.26□□□□□ -1.73
LINC00254-201ENST00000563416 METAP1P53582 386 aa4.26□□□□□ -1.73
LINC00254-201ENST00000563416 HERV-K104P61576 105 aa4.26□□□□□ -1.73
LINC00254-201ENST00000563416 POLR2LP62875 67 aaKnown RBP4.26□□□□□ -1.73
LINC00254-201ENST00000563416 ZNF33AQ06730 810 aa4.26□□□□□ -1.73
LINC00254-201ENST00000563416 IL10RBQ08334 325 aa4.26□□□□□ -1.73
LINC00254-201ENST00000563416 CUL3Q13618 768 aa4.26□□□□□ -1.73
LINC00254-201ENST00000563416 DPYSL3Q14195 570 aa4.26□□□□□ -1.73
LINC00254-201ENST00000563416 MESDQ14696 234 aa4.26□□□□□ -1.73
LINC00254-201ENST00000563416 PAFAH1B3Q15102 231 aaKnown RBP4.26□□□□□ -1.73
LINC00254-201ENST00000563416 PDK2Q15119 407 aa4.26□□□□□ -1.73
LINC00254-201ENST00000563416 HADHQ16836 314 aaKnown RBP4.26□□□□□ -1.73
LINC00254-201ENST00000563416 LRRC38Q5VT99 294 aa4.26□□□□□ -1.73
LINC00254-201ENST00000563416 FAM46CQ5VWP2 391 aa4.26□□□□□ -1.73
LINC00254-201ENST00000563416 LYSMD4Q5XG99 296 aa4.26□□□□□ -1.73
LINC00254-201ENST00000563416 C11orf63Q6NUN7 778 aa4.26□□□□□ -1.73
LINC00254-201ENST00000563416 MFSD12Q6NUT3 480 aa4.26□□□□□ -1.73
LINC00254-201ENST00000563416 NEK5Q6P3R8 708 aa4.26□□□□□ -1.73
LINC00254-201ENST00000563416 MMAAQ8IVH4 418 aaKnown RBP4.26□□□□□ -1.73
LINC00254-201ENST00000563416 KDM8Q8N371 416 aa4.26□□□□□ -1.73
LINC00254-201ENST00000563416 ZNF485Q8NCK3 441 aa4.26□□□□□ -1.73
LINC00254-201ENST00000563416 OR2AP1Q8NGE2 309 aa4.26□□□□□ -1.73
LINC00254-201ENST00000563416 OR5M8Q8NGP6 311 aa4.26□□□□□ -1.73
LINC00254-201ENST00000563416 CCDC110Q8TBZ0 833 aa4.26□□□□□ -1.73
LINC00254-201ENST00000563416 KIAA1524Q8TCG1 905 aa4.26□□□□□ -1.73
LINC00254-201ENST00000563416 UBLCP1Q8WVY7 318 aaPredicted RBP4.26□□□□□ -1.73
LINC00254-201ENST00000563416 NAP1L3Q99457 506 aaPredicted RBP4.26□□□□□ -1.73
LINC00254-201ENST00000563416 OPRPNQ99935 248 aaPredicted RBP4.26□□□□□ -1.73
LINC00254-201ENST00000563416 ZNF670Q9BS34 389 aa4.26□□□□□ -1.73
LINC00254-201ENST00000563416 GPR174Q9BXC1 333 aa4.26□□□□□ -1.73
LINC00254-201ENST00000563416 SLC39A8Q9C0K1 460 aa4.26□□□□□ -1.73
LINC00254-201ENST00000563416 LAT2Q9GZY6 243 aa4.26□□□□□ -1.73
LINC00254-201ENST00000563416 SYTL2Q9HCH5 934 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms