RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 TRIM77I1YAP6 450 aa6.77□□□□□ -1.33
HERPUD1-206ENST00000563343 J3QL48 77 aa6.77□□□□□ -1.33
HERPUD1-206ENST00000563343 PHGDHO43175 533 aaKnown RBP6.77□□□□□ -1.33
HERPUD1-206ENST00000563343 RGS9O75916 674 aaPredicted RBP6.77□□□□□ -1.33
HERPUD1-206ENST00000563343 AVPP01185 164 aa6.77□□□□□ -1.33
HERPUD1-206ENST00000563343 KLK1P06870 262 aa6.77□□□□□ -1.33
HERPUD1-206ENST00000563343 MTHFD2P13995 350 aa6.77□□□□□ -1.33
HERPUD1-206ENST00000563343 PTAFRP25105 342 aa6.77□□□□□ -1.33
HERPUD1-206ENST00000563343 GIFP27352 417 aa6.77□□□□□ -1.33
HERPUD1-206ENST00000563343 APOBEC3AP31941 199 aaPredicted RBP6.77□□□□□ -1.33
HERPUD1-206ENST00000563343 KRT20P35900 424 aa6.77□□□□□ -1.33
HERPUD1-206ENST00000563343 ELK3P41970 407 aa6.77□□□□□ -1.33
HERPUD1-206ENST00000563343 OR3A2P47893 321 aa6.77□□□□□ -1.33
HERPUD1-206ENST00000563343 ATP6V0D1P61421 351 aa6.77□□□□□ -1.33
HERPUD1-206ENST00000563343 MRPS22P82650 360 aaKnown RBP6.77□□□□□ -1.33
HERPUD1-206ENST00000563343 FRG1Q14331 258 aaKnown RBP6.77□□□□□ -1.33
HERPUD1-206ENST00000563343 RNPS1Q15287 305 aaKnown RBP6.77□□□□□ -1.33
HERPUD1-206ENST00000563343 IQCCQ4KMZ1 466 aa6.77□□□□□ -1.33
HERPUD1-206ENST00000563343 C4orf48Q5BLP8 95 aa6.77□□□□□ -1.33
HERPUD1-206ENST00000563343 HBMQ6B0K9 141 aa6.77□□□□□ -1.33
HERPUD1-206ENST00000563343 GTF2IRD2BQ6EKJ0 949 aa6.77□□□□□ -1.33
HERPUD1-206ENST00000563343 TMEM108Q6UXF1 575 aa6.77□□□□□ -1.33
HERPUD1-206ENST00000563343 SSX8Q7RTT4 187 aa6.77□□□□□ -1.33
HERPUD1-206ENST00000563343 GTF2IRD2Q86UP8 949 aa6.77□□□□□ -1.33
HERPUD1-206ENST00000563343 P2RY8Q86VZ1 359 aa6.77□□□□□ -1.33
HERPUD1-206ENST00000563343 SLC44A2Q8IWA5 706 aaPredicted RBP6.77□□□□□ -1.33
HERPUD1-206ENST00000563343 POC1BQ8TC44 478 aa6.77□□□□□ -1.33
HERPUD1-206ENST00000563343 KCTD4Q8WVF5 259 aa6.77□□□□□ -1.33
HERPUD1-206ENST00000563343 OSTF1Q92882 214 aa6.77□□□□□ -1.33
HERPUD1-206ENST00000563343 HPS1Q92902 700 aa6.77□□□□□ -1.33
HERPUD1-206ENST00000563343 TM4SF18Q96CE8 201 aa6.77□□□□□ -1.33
HERPUD1-206ENST00000563343 KLHL29Q96CT2 875 aa6.77□□□□□ -1.33
HERPUD1-206ENST00000563343 MUCL1Q96DR8 90 aa6.77□□□□□ -1.33
HERPUD1-206ENST00000563343 UBXN10Q96LJ8 280 aa6.77□□□□□ -1.33
HERPUD1-206ENST00000563343 KLHL15Q96M94 604 aa6.77□□□□□ -1.33
HERPUD1-206ENST00000563343 RNF145Q96MT1 663 aa6.77□□□□□ -1.33
HERPUD1-206ENST00000563343 INPP5KQ9BT40 448 aa6.77□□□□□ -1.33
HERPUD1-206ENST00000563343 MRPL1Q9BYD6 325 aaKnown RBP6.77□□□□□ -1.33
HERPUD1-206ENST00000563343 RHOJQ9H4E5 214 aa6.77□□□□□ -1.33
HERPUD1-206ENST00000563343 TMEM185BQ9H7F4 350 aa6.77□□□□□ -1.33
HERPUD1-206ENST00000563343 CXorf36Q9H7Y0 433 aa6.77□□□□□ -1.33
HERPUD1-206ENST00000563343 BCO1Q9HAY6 547 aa6.77□□□□□ -1.33
HERPUD1-206ENST00000563343 MYOZ1Q9NP98 299 aaPredicted RBP6.77□□□□□ -1.33
HERPUD1-206ENST00000563343 ESM1Q9NQ30 184 aa6.77□□□□□ -1.33
HERPUD1-206ENST00000563343 FAM120CQ9NX05 1096 aaKnown RBP6.77□□□□□ -1.33
HERPUD1-206ENST00000563343 NUDT4Q9NZJ9 180 aa6.77□□□□□ -1.33
HERPUD1-206ENST00000563343 POU2F3Q9UKI9 436 aa6.77□□□□□ -1.33
HERPUD1-206ENST00000563343 SLC25A15Q9Y619 301 aa6.77□□□□□ -1.33
HERPUD1-206ENST00000563343 FKBP7Q9Y680 259 aa6.77□□□□□ -1.33
HERPUD1-206ENST00000563343 TEX264Q9Y6I9 313 aa6.77□□□□□ -1.33
HERPUD1-206ENST00000563343 PMF1-BGLAPU3KQ54 211 aa6.77□□□□□ -1.33
HERPUD1-206ENST00000563343 UBXN8O00124 270 aa6.76□□□□□ -1.33
HERPUD1-206ENST00000563343 LCE2BO14633 110 aa6.76□□□□□ -1.33
HERPUD1-206ENST00000563343 EFNA2O43921 213 aa6.76□□□□□ -1.33
HERPUD1-206ENST00000563343 GMFGO60234 142 aa6.76□□□□□ -1.33
HERPUD1-206ENST00000563343 UGDHO60701 494 aa6.76□□□□□ -1.33
HERPUD1-206ENST00000563343 BCAS2O75934 225 aaPredicted RBP6.76□□□□□ -1.33
HERPUD1-206ENST00000563343 STAMBPO95630 424 aa6.76□□□□□ -1.33
HERPUD1-206ENST00000563343 ANGPTL1O95841 491 aa6.76□□□□□ -1.33
HERPUD1-206ENST00000563343 YES1P07947 543 aa6.76□□□□□ -1.33
HERPUD1-206ENST00000563343 GGT1P19440 569 aa6.76□□□□□ -1.33
HERPUD1-206ENST00000563343 APEX1P27695 318 aaKnown RBP6.76□□□□□ -1.33
HERPUD1-206ENST00000563343 LIMS1P48059 325 aa6.76□□□□□ -1.33
HERPUD1-206ENST00000563343 PIK3CGP48736 1102 aa6.76□□□□□ -1.33
HERPUD1-206ENST00000563343 ZNF83P51522 516 aa6.76□□□□□ -1.33
HERPUD1-206ENST00000563343 CHN2P52757 468 aa6.76□□□□□ -1.33
HERPUD1-206ENST00000563343 PHEXP78562 749 aa6.76□□□□□ -1.33
HERPUD1-206ENST00000563343 PRR5P85299 388 aa6.76□□□□□ -1.33
HERPUD1-206ENST00000563343 POU4F1Q01851 419 aa6.76□□□□□ -1.33
HERPUD1-206ENST00000563343 CHRNB3Q05901 458 aa6.76□□□□□ -1.33
HERPUD1-206ENST00000563343 MGAT5Q09328 741 aa6.76□□□□□ -1.33
HERPUD1-206ENST00000563343 C17orf67Q0P5P2 114 aa6.76□□□□□ -1.33
HERPUD1-206ENST00000563343 DLG1Q12959 904 aa6.76□□□□□ -1.33
HERPUD1-206ENST00000563343 CSTF3Q12996 717 aaKnown RBP6.76□□□□□ -1.33
HERPUD1-206ENST00000563343 ZKSCAN8Q15776 578 aaPredicted RBP6.76□□□□□ -1.33
HERPUD1-206ENST00000563343 OCLNQ16625 522 aa6.76□□□□□ -1.33
HERPUD1-206ENST00000563343 CPSF6Q16630 551 aaKnown RBP eCLIP6.76□□□□□ -1.33
HERPUD1-206ENST00000563343 PLPPR5Q32ZL2 321 aa6.76□□□□□ -1.33
HERPUD1-206ENST00000563343 HP1BP3Q5SSJ5 553 aaPredicted RBP6.76□□□□□ -1.33
HERPUD1-206ENST00000563343 ISCA2Q86U28 154 aa6.76□□□□□ -1.33
HERPUD1-206ENST00000563343 TRABD2AQ86V40 505 aa6.76□□□□□ -1.33
HERPUD1-206ENST00000563343 METTL4Q8N3J2 472 aa6.76□□□□□ -1.33
HERPUD1-206ENST00000563343 TEX9Q8N6V9 391 aa6.76□□□□□ -1.33
HERPUD1-206ENST00000563343 ZNF433Q8N7K0 673 aaPredicted RBP6.76□□□□□ -1.33
HERPUD1-206ENST00000563343 ANKS4BQ8N8V4 417 aa6.76□□□□□ -1.33
HERPUD1-206ENST00000563343 L3MBTL4Q8NA19 623 aa6.76□□□□□ -1.33
HERPUD1-206ENST00000563343 NUP43Q8NFH3 380 aa6.76□□□□□ -1.33
HERPUD1-206ENST00000563343 OR9A2Q8NGT5 310 aa6.76□□□□□ -1.33
HERPUD1-206ENST00000563343 OR2W6PQ8NHA6 318 aa6.76□□□□□ -1.33
HERPUD1-206ENST00000563343 FAM110BQ8TC76 370 aa6.76□□□□□ -1.33
HERPUD1-206ENST00000563343 TRPC4APQ8TEL6 797 aa6.76□□□□□ -1.33
HERPUD1-206ENST00000563343 ZNF418Q8TF45 676 aaPredicted RBP6.76□□□□□ -1.33
HERPUD1-206ENST00000563343 ZNF75CPQ92670 426 aaPredicted RBP6.76□□□□□ -1.33
HERPUD1-206ENST00000563343 EXT2Q93063 718 aa6.76□□□□□ -1.33
HERPUD1-206ENST00000563343 ERP27Q96DN0 273 aa6.76□□□□□ -1.33
HERPUD1-206ENST00000563343 CFAP36Q96G28 342 aa6.76□□□□□ -1.33
HERPUD1-206ENST00000563343 SERPINI1Q99574 410 aa6.76□□□□□ -1.33
HERPUD1-206ENST00000563343 PSD2Q9BQI7 771 aa6.76□□□□□ -1.33
HERPUD1-206ENST00000563343 COQ10BQ9H8M1 238 aa6.76□□□□□ -1.33
HERPUD1-206ENST00000563343 STOML1Q9UBI4 398 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms